RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 OR5B3Q8NH48 314 aa13.32□□□□□ -0.28
RPL28-210ENST00000560583 CHRDL1Q9BU40 450 aa13.32□□□□□ -0.28
RPL28-210ENST00000560583 NXF2Q9GZY0 626 aaKnown RBP13.32□□□□□ -0.28
RPL28-210ENST00000560583 SCP2D1Q9UJQ7 156 aa13.32□□□□□ -0.28
RPL28-210ENST00000560583 F11RQ9Y624 299 aaKnown RBP13.32□□□□□ -0.28
RPL28-210ENST00000560583 LOC102724200A0A096LPH7 203 aaPredicted RBP13.31□□□□□ -0.28
RPL28-210ENST00000560583 K7EIM0 57 aa13.31□□□□□ -0.28
RPL28-210ENST00000560583 ADMP35318 185 aa13.31□□□□□ -0.28
RPL28-210ENST00000560583 FAUP35544 74 aaKnown RBP13.31□□□□□ -0.28
RPL28-210ENST00000560583 CADM3Q8N126 398 aa13.31□□□□□ -0.28
RPL28-210ENST00000560583 IL17DQ8TAD2 202 aa13.31□□□□□ -0.28
RPL28-210ENST00000560583 SEC22AQ96IW7 307 aa13.31□□□□□ -0.28
RPL28-210ENST00000560583 TP53RKQ96S44 253 aa13.31□□□□□ -0.28
RPL28-210ENST00000560583 PDCD10Q9BUL8 212 aa13.31□□□□□ -0.28
RPL28-210ENST00000560583 C5orf66Q9H5L9 145 aa13.31□□□□□ -0.28
RPL28-210ENST00000560583 ANKRD20A5PA0PJZ0 165 aa13.3□□□□□ -0.28
RPL28-210ENST00000560583 ZNF701M0R085 212 aaPredicted RBP13.3□□□□□ -0.28
RPL28-210ENST00000560583 B3GALNT1O75752 331 aa13.3□□□□□ -0.28
RPL28-210ENST00000560583 JTBO76095 146 aa13.3□□□□□ -0.28
RPL28-210ENST00000560583 AP3S2P59780 193 aa13.3□□□□□ -0.28
RPL28-210ENST00000560583 SURF2Q15527 256 aaPredicted RBP13.3□□□□□ -0.28
RPL28-210ENST00000560583 ANKRD55Q3KP44 614 aa13.3□□□□□ -0.28
RPL28-210ENST00000560583 ODF3L2Q3SX64 289 aa13.3□□□□□ -0.28
RPL28-210ENST00000560583 SP6Q3SY56 376 aa13.3□□□□□ -0.28
RPL28-210ENST00000560583 RBPMS2Q6ZRY4 209 aaKnown RBP13.3□□□□□ -0.28
RPL28-210ENST00000560583 OR51S1Q8NGJ8 323 aa13.3□□□□□ -0.28
RPL28-210ENST00000560583 SCARB1Q8WTV0 552 aa13.3□□□□□ -0.28
RPL28-210ENST00000560583 RRNAD1Q96FB5 475 aaKnown RBP13.3□□□□□ -0.28
RPL28-210ENST00000560583 BSCL2Q96G97 398 aaPredicted RBP13.3□□□□□ -0.28
RPL28-210ENST00000560583 SCGB3A2Q96PL1 93 aa13.3□□□□□ -0.28
RPL28-210ENST00000560583 SPAG8Q99932 426 aaPredicted RBP13.3□□□□□ -0.28
RPL28-210ENST00000560583 DAZ1Q9NQZ3 744 aaKnown RBP13.3□□□□□ -0.28
RPL28-210ENST00000560583 IGHV3OR16-8A0A075B7F1 116 aa13.29□□□□□ -0.28
RPL28-210ENST00000560583 TSPAN4O14817 238 aa13.29□□□□□ -0.28
RPL28-210ENST00000560583 IGKV1-39P01597 117 aa13.29□□□□□ -0.28
RPL28-210ENST00000560583 IGKV1D-39P04432 117 aa13.29□□□□□ -0.28
RPL28-210ENST00000560583 OR2C3Q8N628 320 aa13.29□□□□□ -0.28
RPL28-210ENST00000560583 RBM38Q9H0Z9 239 aaKnown RBP13.29□□□□□ -0.28
RPL28-210ENST00000560583 TMEM14BQ9NUH8 114 aa13.29□□□□□ -0.28
RPL28-210ENST00000560583 C21orf62Q9NYP8 219 aa13.29□□□□□ -0.28
RPL28-210ENST00000560583 UBQLN2Q9UHD9 624 aa13.29□□□□□ -0.28
RPL28-210ENST00000560583 NDUFA4O00483 81 aa13.28□□□□□ -0.28
RPL28-210ENST00000560583 EWSR1Q01844 656 aaKnown RBP eCLIP13.28□□□□□ -0.28
RPL28-210ENST00000560583 SPANXN2Q5MJ10 180 aa13.28□□□□□ -0.28
RPL28-210ENST00000560583 SPSB3Q6PJ21 355 aa13.28□□□□□ -0.28
RPL28-210ENST00000560583 TOMM5Q8N4H5 51 aa13.28□□□□□ -0.28
RPL28-210ENST00000560583 SLC35G3Q8N808 338 aa13.28□□□□□ -0.28
RPL28-210ENST00000560583 ATP6V0BQ99437 205 aa13.28□□□□□ -0.28
RPL28-210ENST00000560583 NAA60Q9H7X0 242 aa13.28□□□□□ -0.28
RPL28-210ENST00000560583 ZNF207O43670 478 aaKnown RBP13.27□□□□□ -0.29
RPL28-210ENST00000560583 IFNA17P01571 189 aa13.27□□□□□ -0.29
RPL28-210ENST00000560583 OR5AC1P0C628 307 aa13.27□□□□□ -0.29
RPL28-210ENST00000560583 INPP1P49441 399 aa13.27□□□□□ -0.29
RPL28-210ENST00000560583 ERHP84090 104 aaKnown RBP13.27□□□□□ -0.29
RPL28-210ENST00000560583 IZUMO4Q1ZYL8 232 aa13.27□□□□□ -0.29
RPL28-210ENST00000560583 ENY2Q9NPA8 101 aa13.27□□□□□ -0.29
RPL28-210ENST00000560583 UCP1P25874 307 aa13.26□□□□□ -0.29
RPL28-210ENST00000560583 HSPE1P61604 102 aaKnown RBP13.26□□□□□ -0.29
RPL28-210ENST00000560583 PRCDQ00LT1 54 aa13.26□□□□□ -0.29
RPL28-210ENST00000560583 DHODHQ02127 395 aa13.26□□□□□ -0.29
RPL28-210ENST00000560583 SPINK9Q5DT21 86 aa13.26□□□□□ -0.29
RPL28-210ENST00000560583 UBAC2Q8NBM4 344 aa13.26□□□□□ -0.29
RPL28-210ENST00000560583 MISP3Q96FF7 219 aa13.26□□□□□ -0.29
RPL28-210ENST00000560583 SOSTQ9BQB4 213 aa13.26□□□□□ -0.29
RPL28-210ENST00000560583 RTBDNQ9BSG5 229 aaPredicted RBP13.26□□□□□ -0.29
RPL28-210ENST00000560583 C20orf24Q9BUV8 137 aa13.26□□□□□ -0.29
RPL28-210ENST00000560583 KCNIP3Q9Y2W7 256 aa13.26□□□□□ -0.29
RPL28-210ENST00000560583 IGKV1-5P01602 117 aa13.25□□□□□ -0.29
RPL28-210ENST00000560583 CTSGP08311 255 aa13.25□□□□□ -0.29
RPL28-210ENST00000560583 HOXA1P49639 335 aaPredicted RBP13.25□□□□□ -0.29
RPL28-210ENST00000560583 DEFB135Q30KP9 77 aa13.25□□□□□ -0.29
RPL28-210ENST00000560583 Q56UQ5 140 aa13.25□□□□□ -0.29
RPL28-210ENST00000560583 WFDC3Q8IUB2 231 aa13.25□□□□□ -0.29
RPL28-210ENST00000560583 OR1P1Q8NH06 330 aa13.25□□□□□ -0.29
RPL28-210ENST00000560583 TMEM222Q9H0R3 208 aa13.25□□□□□ -0.29
RPL28-210ENST00000560583 GPR132Q9UNW8 380 aa13.25□□□□□ -0.29
RPL28-210ENST00000560583 V9GYH0 126 aa13.25□□□□□ -0.29
RPL28-210ENST00000560583 A0A0J9YWU9 116 aa13.24□□□□□ -0.29
RPL28-210ENST00000560583 CRYM-AS1A6NIL9 109 aa13.24□□□□□ -0.29
RPL28-210ENST00000560583 I3L2K1 104 aa13.24□□□□□ -0.29
RPL28-210ENST00000560583 K7EMT4 169 aa13.24□□□□□ -0.29
RPL28-210ENST00000560583 AKR1C4P17516 323 aa13.24□□□□□ -0.29
RPL28-210ENST00000560583 SNCAP37840 140 aa13.24□□□□□ -0.29
RPL28-210ENST00000560583 RBPMSQ93062 196 aaKnown RBP13.24□□□□□ -0.29
RPL28-210ENST00000560583 TP53TG1Q9Y2A0 90 aa13.24□□□□□ -0.29
RPL28-210ENST00000560583 C15orf62A8K5M9 175 aa13.23□□□□□ -0.29
RPL28-210ENST00000560583 ST8SIA3O43173 380 aa13.23□□□□□ -0.29
RPL28-210ENST00000560583 ANXA3P12429 323 aa13.23□□□□□ -0.29
RPL28-210ENST00000560583 TMEM268Q5VZI3 342 aa13.23□□□□□ -0.29
RPL28-210ENST00000560583 TRIQKQ629K1 86 aa13.23□□□□□ -0.29
RPL28-210ENST00000560583 Q6ZWC4 215 aa13.23□□□□□ -0.29
RPL28-210ENST00000560583 CCDC190Q86UF4 302 aa13.23□□□□□ -0.29
RPL28-210ENST00000560583 FAM219AQ8IW50 185 aa13.23□□□□□ -0.29
RPL28-210ENST00000560583 ZNF114Q8NC26 417 aa13.23□□□□□ -0.29
RPL28-210ENST00000560583 PINX1Q96BK5 328 aaKnown RBP13.23□□□□□ -0.29
RPL28-210ENST00000560583 NDUFA13Q9P0J0 144 aa13.23□□□□□ -0.29
RPL28-210ENST00000560583 SMPXQ9UHP9 88 aa13.23□□□□□ -0.29
RPL28-210ENST00000560583 FCGR2BP31994 310 aaPredicted RBP13.22□□□□□ -0.29
RPL28-210ENST00000560583 SUB1P53999 127 aaKnown RBP eCLIP13.22□□□□□ -0.29
RPL28-210ENST00000560583 APOC4P55056 127 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms