RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 GABRA2P47869 451 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 HOXA1P49639 335 aaPredicted RBP3.48□□□□□ -1.85
TMOD3-207ENST00000560549 SULT1A2P50226 295 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 AKR1C2P52895 323 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 KLF3P57682 345 aaPredicted RBP3.48□□□□□ -1.85
TMOD3-207ENST00000560549 PLP1P60201 277 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 SRPXP78539 464 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 PAX5Q02548 391 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 AKR1C1Q04828 323 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 COTL1Q14019 142 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 EDDM3AQ14507 147 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 SMCO1Q147U7 214 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 LTC4SQ16873 150 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 OR2B11Q5JQS5 317 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 GPR157Q5UAW9 335 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 BTNL3Q6UXE8 466 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 TCF23Q7RTU1 214 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 CMTM1Q8IZ96 169 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 ZCCHC24Q8N2G6 241 aaKnown RBP3.48□□□□□ -1.85
TMOD3-207ENST00000560549 TMEM252Q8N6L7 170 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 ZNRF1Q8ND25 227 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 OR10Z1Q8NGY1 313 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 CD300LFQ8TDQ1 290 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 FAM222BQ8WU58 562 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 IL22RA2Q969J5 263 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 MUCL1Q96DR8 90 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 SMIM8Q96KF7 97 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 LURAP1Q96LR2 239 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 WFIKKN1Q96NZ8 548 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 GINS3Q9BRX5 216 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 SCRT1Q9BWW7 348 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 ZC4H2Q9NQZ6 224 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 KCNIP1Q9NZI2 227 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 DIDO1Q9BTC0 2240 aaKnown RBP3.48□□□□□ -1.85
TMOD3-207ENST00000560549 HIVEP3Q5T1R4 2406 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 CELSR1Q9NYQ6 3014 aa3.48□□□□□ -1.85
TMOD3-207ENST00000560549 A0A1B0GU03 582 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 DUXBA0A1W2PPF3 345 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 A0A1W2PS18 150 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 ODAMA1E959 279 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 ZNF705EA8MWA4 302 aaPredicted RBP3.47□□□□□ -1.85
TMOD3-207ENST00000560549 AGPAT2O15120 278 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 SLC31A2O15432 143 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 MED6O75586 246 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 MMP23AO75900 390 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 CST7O76096 145 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 IGHV3-7P01780 117 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 GYPAP02724 150 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 SERPINE2P07093 398 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 IAPPP10997 89 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 MUC1P15941 1255 aaPredicted RBP3.47□□□□□ -1.85
TMOD3-207ENST00000560549 IL2RGP31785 369 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 FHITP49789 147 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 DYNLT3P51808 116 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 CCL20P78556 96 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 TNFAIP6P98066 277 aaPredicted RBP3.47□□□□□ -1.85
TMOD3-207ENST00000560549 TMEM267Q0VDI3 215 aaPredicted RBP3.47□□□□□ -1.85
TMOD3-207ENST00000560549 GAGE5Q13069 117 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 GAGE6Q13070 117 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 CLINT1Q14677 625 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 GUCA2BQ16661 112 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 C17orf58Q2M2W7 97 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 SMIM21Q3B7S5 101 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 UQCC3Q6UW78 93 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 C1orf174Q8IYL3 243 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 LINC00518Q8N0U6 118 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 UBAC2Q8NBM4 344 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 ST6GALNAC3Q8NDV1 305 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 DEFB108BQ8NET1 73 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 NUP37Q8NFH4 326 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 LEAP2Q969E1 77 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 ARL11Q969Q4 196 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 GALMQ96C23 342 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 ABHD14BQ96IU4 210 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 GAFA1Q96PS6 74 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 CCL13Q99616 98 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 AGMATQ9BSE5 352 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 OR2D2Q9H210 308 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 FNDC4Q9H6D8 234 aaPredicted RBP3.47□□□□□ -1.85
TMOD3-207ENST00000560549 PLEKHF2Q9H8W4 249 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 LYRM2Q9NU23 88 aaPredicted RBP3.47□□□□□ -1.85
TMOD3-207ENST00000560549 CACNG5Q9UF02 275 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 CACFD1Q9UGQ2 172 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 GLS2Q9UI32 602 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 PITPNC1Q9UKF7 332 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 PSG11Q9UQ72 335 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 PDZD2O15018 2839 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 SPTBN1Q01082 2364 aaKnown RBP3.47□□□□□ -1.85
TMOD3-207ENST00000560549 TMEM218A2RU14 115 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 SMCO3A2RU48 225 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 RAB19A4D1S5 217 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 FAM74A7A6NL05 159 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 SHISA9B4DS77 424 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 KRBOX1C9JBD0 128 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 E7EQL1 145 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 H3BP45 60 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 K7N7A8 449 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 DNASE2O00115 360 aaPredicted RBP3.47□□□□□ -1.85
TMOD3-207ENST00000560549 S1PR2O95136 353 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 OR4A8P0C604 315 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms