RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 WT1-ASQ06250 92 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 BAK1Q16611 211 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 PDLIM3Q53GG5 364 aaPredicted RBP6.15□□□□□ -1.42
LRRC28-219ENST00000560483 FAM209BQ5JX69 171 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 ZNF343Q6P1L6 599 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 PLET1Q6UQ28 207 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 HAPLN4Q86UW8 402 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 SELENOHQ8IZQ5 122 aaKnown RBP6.15□□□□□ -1.42
LRRC28-219ENST00000560483 LGI3Q8N145 548 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 OR1L6Q8NGR2 347 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 OR1S1Q8NH92 325 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 PRR25Q96S07 402 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 SLC25A21Q9BQT8 299 aaPredicted RBP6.15□□□□□ -1.42
LRRC28-219ENST00000560483 SRSF8Q9BRL6 282 aaKnown RBP6.15□□□□□ -1.42
LRRC28-219ENST00000560483 HEYLQ9NQ87 328 aaPredicted RBP6.15□□□□□ -1.42
LRRC28-219ENST00000560483 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.15□□□□□ -1.42
LRRC28-219ENST00000560483 TMEM14BQ9NUH8 114 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 CACNG5Q9UF02 275 aa6.15□□□□□ -1.42
LRRC28-219ENST00000560483 PAIP2BQ9ULR5 123 aaKnown RBP6.15□□□□□ -1.42
LRRC28-219ENST00000560483 IGLV11-55A0A075B6I3 123 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.14□□□□□ -1.43
LRRC28-219ENST00000560483 TRBV7-1A0A0A6YYK4 115 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 TRBV9A0A0B4J1U6 114 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 PIGBOS1A0A0B4J2F0 54 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 MFSD2BA6NFX1 497 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 OR2T8A6NH00 312 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 CGB1A6NKQ9 187 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 H3BS24 57 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 GGCTO75223 188 aaKnown RBP6.14□□□□□ -1.43
LRRC28-219ENST00000560483 YIF1AO95070 293 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 OR2C1O95371 312 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 CDS2O95674 445 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 SULT1A3P0DMM9 295 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 SULT1A4P0DMN0 295 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 IL7P13232 177 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 INSL3P51460 131 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 PRCDQ00LT1 54 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 DCTN2Q13561 401 aaKnown RBP6.14□□□□□ -1.43
LRRC28-219ENST00000560483 FAM106AQ4KMX7 169 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 FAM219AQ8IW50 185 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 OR9G4Q8NGQ1 327 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 GLYATL2Q8WU03 294 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 DEDD2Q8WXF8 326 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 S100ZQ8WXG8 99 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 HIPK2Q9H2X6 1198 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 C21orf62Q9NYP8 219 aa6.14□□□□□ -1.43
LRRC28-219ENST00000560483 ZNF256Q9Y2P7 627 aaPredicted RBP6.14□□□□□ -1.43
LRRC28-219ENST00000560483 F11RQ9Y624 299 aaKnown RBP6.14□□□□□ -1.43
LRRC28-219ENST00000560483 SORL1Q92673 2214 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 A0A0B4J293 547 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 A0A0G2JRQ6 117 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 BMPR1BO00238 502 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 GNG7O60262 68 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 SCGB2A1O75556 95 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 BRI3O95415 125 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 IGHV3-48P01763 117 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 HOXB5P09067 269 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 OPRK1P41145 380 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 KRTAP10-11P60412 298 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 TMEM187Q14656 261 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 TMEM128Q5BJH2 165 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 ACSM6Q6P461 480 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 LYZL2Q7Z4W2 148 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 OR2C3Q8N628 320 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 UXS1Q8NBZ7 420 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 OR1P1Q8NH06 330 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 LHFPL5Q8TAF8 219 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 TMEM230Q96A57 120 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 GPR146Q96CH1 333 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 C7orf50Q9BRJ6 194 aaKnown RBP6.13□□□□□ -1.43
LRRC28-219ENST00000560483 C20orf24Q9BUV8 137 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 BATF3Q9NR55 127 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 SELENOKQ9Y6D0 94 aa6.13□□□□□ -1.43
LRRC28-219ENST00000560483 TRAV6A0A075B6T7 132 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 A0A0B4J2A0 478 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 FAM240BA0A1B0GVZ2 78 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 WI2-2373I1.2A0A1W2PRP0 233 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 WRBO00258 174 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 NUPL2O15504 423 aaKnown RBP6.12□□□□□ -1.43
LRRC28-219ENST00000560483 LYRM1O43325 122 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 TGOLN2O43493 480 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 SFT2D2O95562 160 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 MT-CO2P00403 227 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 IFNA10P01566 189 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 SPNP16150 400 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 MFAP4P55083 255 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 SPCS3P61009 180 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 PPP1R1AQ13522 171 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 KLF5Q13887 457 aaPredicted RBP6.12□□□□□ -1.43
LRRC28-219ENST00000560483 ZNF846Q147U1 533 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 SMCO1Q147U7 214 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 GUCA2BQ16661 112 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 KPRPQ5T749 579 aaPredicted RBP6.12□□□□□ -1.43
LRRC28-219ENST00000560483 MZT2BQ6NZ67 158 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 CADM3Q8N126 398 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 DUSP18Q8NEJ0 188 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 COQ8AQ8NI60 647 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 VN1R17PQ8TDU5 208 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 SCARB1Q8WTV0 552 aa6.12□□□□□ -1.43
LRRC28-219ENST00000560483 IL22RA2Q969J5 263 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms