RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 ADARB2-AS1A8MUL3 147 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 LIPFP07098 398 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 CRYGBP07316 175 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 NPPCP23582 126 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 OR10J1P30954 320 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 ATP5G3P48201 142 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 BPIFB3P59826 476 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 FOXL1Q12952 345 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 GCSAMLQ5JQS6 135 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 DNLZQ5SXM8 178 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 FAM78BQ5VT40 261 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 SSMEM1Q8WWF3 244 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 C22orf15Q8WYQ4 148 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 ZNF430Q9H8G1 570 aaPredicted RBP7.84□□□□□ -1.15
RTF1-206ENST00000560447 CBLN4Q9NTU7 201 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 RAXQ9Y2V3 346 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 URGCP-MRPS24S4R325 110 aa7.84□□□□□ -1.15
RTF1-206ENST00000560447 PPIAL4CA0A0B4J2A2 164 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 MDFIC2A0A1B0GVS7 189 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 TCRBV4S1A1TA0A5B7 111 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 PPP5D1E7EU14 171 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 BUB1B-PAK6H3BSN5 160 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 M0R1W7 72 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 PHOX2AO14813 284 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 HIST1H2BKO60814 126 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 NDUFB4O95168 129 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 HIST1H2BJP06899 126 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 CRYGCP07315 174 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 C8orf88P0DMB2 117 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 PPIAL4GP0DN37 164 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 HIST1H2BOP23527 126 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 HIST1H2BBP33778 126 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 HIST1H2BDP58876 126 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 HIST1H2BCP62807 126 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 RPL19P84098 196 aaKnown RBP7.83□□□□□ -1.16
RTF1-206ENST00000560447 ADORA2A-AS1P86434 159 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 PRSS8Q16651 343 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 HIST2H2BEQ16778 126 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.83□□□□□ -1.16
RTF1-206ENST00000560447 C1orf122Q6ZSJ8 110 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 STXBP6Q8NFX7 210 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 OR2T10Q8NGZ9 312 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 LINC01560Q8TB33 94 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 HIST1H2BHQ93079 126 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 HIST1H2BNQ99877 126 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 HIST1H2BMQ99879 126 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 PITPNC1Q9UKF7 332 aa7.83□□□□□ -1.16
RTF1-206ENST00000560447 IGHV1-3A0A0C4DH29 117 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 PSMB11A5LHX3 300 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 OOSP1A8MZH6 123 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 PLAUP00749 431 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 TRGC2P03986 189 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 MYOD1P15172 320 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 COL8A2P25067 703 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 CEACAM3P40198 252 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 RPL27AP46776 148 aaKnown RBP7.82□□□□□ -1.16
RTF1-206ENST00000560447 UBE2G2P60604 165 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 COA6Q5JTJ3 125 aaKnown RBP7.82□□□□□ -1.16
RTF1-206ENST00000560447 C11orf71Q6IPW1 123 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 DTX2Q86UW9 622 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 KIR3DL3Q8N743 410 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 OR11H6Q8NGC7 330 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 OR1L6Q8NGR2 347 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 OR1P1Q8NH06 330 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 ACY3Q96HD9 319 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 TRGV9Q99603 122 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 SLC25A33Q9BSK2 321 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 SEPSECSQ9HD40 501 aaKnown RBP7.82□□□□□ -1.16
RTF1-206ENST00000560447 DNAJC4Q9NNZ3 241 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 ZNRD1Q9P1U0 126 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 INSIG2Q9Y5U4 225 aa7.82□□□□□ -1.16
RTF1-206ENST00000560447 RP1L1Q8IWN7 2480 aaPredicted RBP7.81□□□□□ -1.16
RTF1-206ENST00000560447 POLEQ07864 2286 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 IGKV1OR2-108A0A075B7D4 117 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 A0A1W2PPI3 338 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 CGB1A6NKQ9 187 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 LY6LH3BQJ8 138 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 SLC25A17O43808 307 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 ACTL6BO94805 426 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 OR10J4P0C629 311 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 TRGC1P0CF51 173 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 S100A2P29034 98 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 REG1BP48304 166 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 PLP1P60201 277 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 WT1-ASQ06250 92 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 PSG5Q15238 335 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 MRGPRG-AS1Q2M3A8 158 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 COX19Q49B96 90 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 MIR17HGQ75NE6 70 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 OR10W1Q8NGF6 305 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 RPEQ96AT9 228 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 SFRP2Q96HF1 295 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 GAR1Q9NY12 217 aaKnown RBP7.81□□□□□ -1.16
RTF1-206ENST00000560447 SIGLEC9Q9Y336 463 aa7.81□□□□□ -1.16
RTF1-206ENST00000560447 YTHDF2Q9Y5A9 579 aaKnown RBP7.81□□□□□ -1.16
RTF1-206ENST00000560447 TNCP24821 2201 aa7.8□□□□□ -1.16
RTF1-206ENST00000560447 SCO2A0A1W2PP80 73 aa7.8□□□□□ -1.16
RTF1-206ENST00000560447 IGLC7A0M8Q6 106 aa7.8□□□□□ -1.16
RTF1-206ENST00000560447 GOSR1O95249 250 aa7.8□□□□□ -1.16
RTF1-206ENST00000560447 DEFA4P12838 97 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms