RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 CCDC28AQ8IWP9 274 aa8.66□□□□□ -1.02
SNRPA1-211ENST00000560433 ABHD5Q8WTS1 349 aa8.66□□□□□ -1.02
SNRPA1-211ENST00000560433 GGTLC1Q9BX51 225 aa8.66□□□□□ -1.02
SNRPA1-211ENST00000560433 KIAA1456Q9P272 454 aa8.66□□□□□ -1.02
SNRPA1-211ENST00000560433 TLN2Q9Y4G6 2542 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 TEX22C9J3V5 150 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 MSMBP08118 114 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 TMEM11P17152 192 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 DLK1P80370 383 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 HABP2Q14520 560 aaPredicted RBP8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 TEPPQ6URK8 271 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 TMEM219Q86XT9 240 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 OR2T10Q8NGZ9 312 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 PARD6GQ9BYG4 376 aaPredicted RBP8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 GSX1Q9H4S2 264 aaPredicted RBP8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 GNG13Q9P2W3 67 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 PXMP4Q9Y6I8 212 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 YIF1AO95070 293 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 CD5P06127 495 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 CD69Q07108 199 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 MINOS1Q5TGZ0 78 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 CCDC144NLQ6NUI1 221 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 GATAD1Q8WUU5 269 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 SLC39A9Q9NUM3 307 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 LSM4Q9Y4Z0 139 aaKnown RBP8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 DMRT1Q9Y5R6 373 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 MINOS1-NBL1R4GNA1 71 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 S4R3C0 116 aa8.65□□□□□ -1.02
SNRPA1-211ENST00000560433 A0A0U1RQK1 487 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 MAP1LC3B2A6NCE7 125 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 C17orf112F2Z3M2 114 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 LY86O95711 162 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 NDPQ00604 133 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 FXYD3Q14802 87 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 C5orf64Q2M2E5 130 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 AKIRIN2Q53H80 203 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 UQCC3Q6UW78 93 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 CENPVQ7Z7K6 275 aaPredicted RBP8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 STPG3Q8N7X2 389 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 RXFP4Q8TDU9 374 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 NPIPB3Q92617 1050 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 MALSU1Q96EH3 234 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 MAP1LC3BQ9GZQ8 125 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 FASNP49327 2511 aaKnown RBP8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 NUPL2O15504 423 aaKnown RBP8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 OR10J1P30954 320 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 B2MP61769 119 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 SPATA31B1PQ5VZV4 182 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 SLC16A13Q7RTY0 426 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 RAB24Q969Q5 203 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 SLC25A33Q9BSK2 321 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 GGACTQ9BVM4 153 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 POLR3KQ9Y2Y1 108 aaPredicted RBP8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 TIMM9Q9Y5J7 89 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 HECTD1Q9ULT8 2610 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 MXRA5Q9NR99 2828 aa8.64□□□□□ -1.03
SNRPA1-211ENST00000560433 RBFOX3A6NFN3 312 aa8.63□□□□□ -1.03
SNRPA1-211ENST00000560433 CX3CL1P78423 397 aa8.63□□□□□ -1.03
SNRPA1-211ENST00000560433 ZNF90Q03938 601 aa8.63□□□□□ -1.03
SNRPA1-211ENST00000560433 NPBQ8NG41 125 aa8.63□□□□□ -1.03
SNRPA1-211ENST00000560433 SEPSECSQ9HD40 501 aaKnown RBP8.63□□□□□ -1.03
SNRPA1-211ENST00000560433 TBL2Q9Y4P3 447 aaKnown RBP8.63□□□□□ -1.03
SNRPA1-211ENST00000560433 LINC01548A6NM66 108 aa8.63□□□□□ -1.03
SNRPA1-211ENST00000560433 NDUFA3O95167 84 aa8.63□□□□□ -1.03
SNRPA1-211ENST00000560433 TGFAP01135 160 aa8.63□□□□□ -1.03
SNRPA1-211ENST00000560433 DEFB113Q30KQ7 82 aa8.63□□□□□ -1.03
SNRPA1-211ENST00000560433 RNF5Q99942 180 aa8.63□□□□□ -1.03
SNRPA1-211ENST00000560433 HSPB9Q9BQS6 159 aa8.63□□□□□ -1.03
SNRPA1-211ENST00000560433 WNT10AQ9GZT5 417 aa8.63□□□□□ -1.03
SNRPA1-211ENST00000560433 IGHV1-69DA0A0B4J2H0 117 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 MDFIC2A0A1B0GVS7 189 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 NUDT19A8MXV4 375 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 B4DSR2 109 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 IGHV1-69P01742 117 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 FAM106CPP0CH98 169 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 RND2P52198 227 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 SUB1P53999 127 aaKnown RBP eCLIP8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 BTN1A1Q13410 526 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 LY6EQ16553 131 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 Q5PR19 223 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 TMEM144Q7Z5S9 345 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 Q8N6K4 173 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 LFNGQ8NES3 379 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 C20orf24Q9BUV8 137 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 DOK5Q9P104 306 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 CREBBPQ92793 2442 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 ITPR3Q14573 2671 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 A0A096LNT2 108 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 CDC34P49427 236 aaPredicted RBP8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 KIAA0141Q14154 515 aaPredicted RBP8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 ACOT6Q3I5F7 207 aaPredicted RBP8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 DPPA3Q6W0C5 159 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 Q8N9W7 124 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 MBD3L1Q8WWY6 194 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 PSMG3-AS1Q96PY0 264 aa8.62□□□□□ -1.03
SNRPA1-211ENST00000560433 A0A1W2PPV4 95 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 INS-IGF2F8WCM5 200 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 MT-CO2P00403 227 aa8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 SNRPCP09234 159 aaKnown RBP8.61□□□□□ -1.03
SNRPA1-211ENST00000560433 AKR1C3P42330 323 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms