RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 MARC2Q969Z3 335 aa9.96□□□□□ -0.82
SMAD3-213ENST00000560175 GPR146Q96CH1 333 aa9.96□□□□□ -0.82
SMAD3-213ENST00000560175 PLEKHA3Q9HB20 300 aa9.96□□□□□ -0.82
SMAD3-213ENST00000560175 PALMDQ9NP74 551 aa9.96□□□□□ -0.82
SMAD3-213ENST00000560175 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.96□□□□□ -0.82
SMAD3-213ENST00000560175 GAR1Q9NY12 217 aaKnown RBP9.96□□□□□ -0.82
SMAD3-213ENST00000560175 NDUFA13Q9P0J0 144 aa9.96□□□□□ -0.82
SMAD3-213ENST00000560175 MRPL27Q9P0M9 148 aaKnown RBP9.96□□□□□ -0.82
SMAD3-213ENST00000560175 KCNIP3Q9Y2W7 256 aa9.96□□□□□ -0.82
SMAD3-213ENST00000560175 OR2T8A6NH00 312 aa9.95□□□□□ -0.82
SMAD3-213ENST00000560175 K7EMT4 169 aa9.95□□□□□ -0.82
SMAD3-213ENST00000560175 NDUFA4O00483 81 aa9.95□□□□□ -0.82
SMAD3-213ENST00000560175 IGHV4-30-4P0DP06 118 aa9.95□□□□□ -0.82
SMAD3-213ENST00000560175 RNASE2P10153 161 aaKnown RBP9.95□□□□□ -0.82
SMAD3-213ENST00000560175 FAUP35544 74 aaKnown RBP9.95□□□□□ -0.82
SMAD3-213ENST00000560175 SPCS3P61009 180 aa9.95□□□□□ -0.82
SMAD3-213ENST00000560175 TM4SF20Q53R12 229 aa9.95□□□□□ -0.82
SMAD3-213ENST00000560175 LINC00322Q6ZN03 302 aaPredicted RBP9.95□□□□□ -0.82
SMAD3-213ENST00000560175 TOMM5Q8N4H5 51 aa9.95□□□□□ -0.82
SMAD3-213ENST00000560175 UXS1Q8NBZ7 420 aa9.95□□□□□ -0.82
SMAD3-213ENST00000560175 TMEM190Q8WZ59 177 aa9.95□□□□□ -0.82
SMAD3-213ENST00000560175 SRRQ9GZT4 340 aa9.95□□□□□ -0.82
SMAD3-213ENST00000560175 MCUBQ9NWR8 336 aa9.95□□□□□ -0.82
SMAD3-213ENST00000560175 MLXQ9UH92 298 aa9.95□□□□□ -0.82
SMAD3-213ENST00000560175 DNAH7Q8WXX0 4024 aa9.95□□□□□ -0.82
SMAD3-213ENST00000560175 TRAV25A0A0B4J276 109 aa9.94□□□□□ -0.82
SMAD3-213ENST00000560175 ZNF320A2RRD8 509 aa9.94□□□□□ -0.82
SMAD3-213ENST00000560175 MT-CO2P00403 227 aa9.94□□□□□ -0.82
SMAD3-213ENST00000560175 IFNA17P01571 189 aa9.94□□□□□ -0.82
SMAD3-213ENST00000560175 MFAP4P55083 255 aa9.94□□□□□ -0.82
SMAD3-213ENST00000560175 SPANXN2Q5MJ10 180 aa9.94□□□□□ -0.82
SMAD3-213ENST00000560175 TMEM268Q5VZI3 342 aa9.94□□□□□ -0.82
SMAD3-213ENST00000560175 CACNG8Q8WXS5 425 aa9.94□□□□□ -0.82
SMAD3-213ENST00000560175 SDHCQ99643 169 aaPredicted RBP9.94□□□□□ -0.82
SMAD3-213ENST00000560175 SLC25A21Q9BQT8 299 aaPredicted RBP9.94□□□□□ -0.82
SMAD3-213ENST00000560175 CACFD1Q9UGQ2 172 aa9.94□□□□□ -0.82
SMAD3-213ENST00000560175 UFC1Q9Y3C8 167 aa9.94□□□□□ -0.82
SMAD3-213ENST00000560175 U3KQK5 164 aa9.94□□□□□ -0.82
SMAD3-213ENST00000560175 IGHV3-21A0A0B4J1V1 117 aa9.93□□□□□ -0.82
SMAD3-213ENST00000560175 A0A0B4J2A0 478 aa9.93□□□□□ -0.82
SMAD3-213ENST00000560175 TMEM128Q5BJH2 165 aa9.93□□□□□ -0.82
SMAD3-213ENST00000560175 SPINK9Q5DT21 86 aa9.93□□□□□ -0.82
SMAD3-213ENST00000560175 NMSQ5H8A3 153 aa9.93□□□□□ -0.82
SMAD3-213ENST00000560175 SLC35G3Q8N808 338 aa9.93□□□□□ -0.82
SMAD3-213ENST00000560175 LRTM2Q8N967 370 aa9.93□□□□□ -0.82
SMAD3-213ENST00000560175 OR10C1Q96KK4 312 aa9.93□□□□□ -0.82
SMAD3-213ENST00000560175 WWC2-AS2Q96NR7 200 aa9.93□□□□□ -0.82
SMAD3-213ENST00000560175 ASCL2Q99929 193 aa9.93□□□□□ -0.82
SMAD3-213ENST00000560175 TM2D3Q9BRN9 247 aa9.93□□□□□ -0.82
SMAD3-213ENST00000560175 DAZ1Q9NQZ3 744 aaKnown RBP9.93□□□□□ -0.82
SMAD3-213ENST00000560175 SHPKQ9UHJ6 478 aa9.93□□□□□ -0.82
SMAD3-213ENST00000560175 IGHV3-35A0A0C4DH35 117 aa9.92□□□□□ -0.82
SMAD3-213ENST00000560175 C15orf62A8K5M9 175 aa9.92□□□□□ -0.82
SMAD3-213ENST00000560175 CORTO00230 105 aa9.92□□□□□ -0.82
SMAD3-213ENST00000560175 AKR1C4P17516 323 aa9.92□□□□□ -0.82
SMAD3-213ENST00000560175 SNCAP37840 140 aa9.92□□□□□ -0.82
SMAD3-213ENST00000560175 SUB1P53999 127 aaKnown RBP eCLIP9.92□□□□□ -0.82
SMAD3-213ENST00000560175 BAK1Q16611 211 aa9.92□□□□□ -0.82
SMAD3-213ENST00000560175 ZNF57Q68EA5 555 aaPredicted RBP9.92□□□□□ -0.82
SMAD3-213ENST00000560175 GTSCR1Q86UQ5 136 aa9.92□□□□□ -0.82
SMAD3-213ENST00000560175 TMEM61Q8N0U2 210 aa9.92□□□□□ -0.82
SMAD3-213ENST00000560175 DYNLRB2Q8TF09 96 aa9.92□□□□□ -0.82
SMAD3-213ENST00000560175 MISP3Q96FF7 219 aa9.92□□□□□ -0.82
SMAD3-213ENST00000560175 PDCD10Q9BUL8 212 aa9.92□□□□□ -0.82
SMAD3-213ENST00000560175 FNDC4Q9H6D8 234 aaPredicted RBP9.92□□□□□ -0.82
SMAD3-213ENST00000560175 CACNG5Q9UF02 275 aa9.92□□□□□ -0.82
SMAD3-213ENST00000560175 PIGBOS1A0A0B4J2F0 54 aa9.91□□□□□ -0.82
SMAD3-213ENST00000560175 NUPL2O15504 423 aaKnown RBP9.91□□□□□ -0.82
SMAD3-213ENST00000560175 PITX3O75364 302 aa9.91□□□□□ -0.82
SMAD3-213ENST00000560175 TMEM50AO95807 157 aa9.91□□□□□ -0.82
SMAD3-213ENST00000560175 CD7P09564 240 aa9.91□□□□□ -0.82
SMAD3-213ENST00000560175 SRPXP78539 464 aa9.91□□□□□ -0.82
SMAD3-213ENST00000560175 RELQ04864 619 aaPredicted RBP9.91□□□□□ -0.82
SMAD3-213ENST00000560175 C2orf83Q53S99 150 aa9.91□□□□□ -0.82
SMAD3-213ENST00000560175 Q56UQ5 140 aa9.91□□□□□ -0.82
SMAD3-213ENST00000560175 LYZL2Q7Z4W2 148 aa9.91□□□□□ -0.82
SMAD3-213ENST00000560175 RNASE11Q8TAA1 199 aaKnown RBP9.91□□□□□ -0.82
SMAD3-213ENST00000560175 WDR89Q96FK6 387 aaPredicted RBP9.91□□□□□ -0.82
SMAD3-213ENST00000560175 NEURL2Q9BR09 285 aa9.91□□□□□ -0.82
SMAD3-213ENST00000560175 HSPB7Q9UBY9 170 aa9.91□□□□□ -0.82
SMAD3-213ENST00000560175 DUXBA0A1W2PPF3 345 aa9.9□□□□□ -0.82
SMAD3-213ENST00000560175 TSPAN4O14817 238 aa9.9□□□□□ -0.82
SMAD3-213ENST00000560175 SULT1A3P0DMM9 295 aa9.9□□□□□ -0.82
SMAD3-213ENST00000560175 SULT1A4P0DMN0 295 aa9.9□□□□□ -0.82
SMAD3-213ENST00000560175 HTR2BP41595 481 aa9.9□□□□□ -0.82
SMAD3-213ENST00000560175 NPBWR1P48145 328 aa9.9□□□□□ -0.82
SMAD3-213ENST00000560175 CCR6P51684 374 aa9.9□□□□□ -0.82
SMAD3-213ENST00000560175 BTNL8Q6UX41 500 aa9.9□□□□□ -0.82
SMAD3-213ENST00000560175 LGI3Q8N145 548 aa9.9□□□□□ -0.82
SMAD3-213ENST00000560175 UBAC2Q8NBM4 344 aa9.9□□□□□ -0.82
SMAD3-213ENST00000560175 DUSP18Q8NEJ0 188 aa9.9□□□□□ -0.82
SMAD3-213ENST00000560175 OR4X1Q8NH49 305 aa9.9□□□□□ -0.82
SMAD3-213ENST00000560175 TMEM170AQ8WVE7 144 aa9.9□□□□□ -0.82
SMAD3-213ENST00000560175 PRR13Q9NZ81 148 aa9.9□□□□□ -0.82
SMAD3-213ENST00000560175 NBEAL2Q6ZNJ1 2754 aa9.9□□□□□ -0.83
SMAD3-213ENST00000560175 A0A1B0GU03 582 aa9.89□□□□□ -0.83
SMAD3-213ENST00000560175 NAP1L6A6NFF2 107 aa9.89□□□□□ -0.83
SMAD3-213ENST00000560175 IGHV3-48P01763 117 aa9.89□□□□□ -0.83
SMAD3-213ENST00000560175 SLC25A6P12236 298 aa9.89□□□□□ -0.83
SMAD3-213ENST00000560175 ANXA3P12429 323 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms