RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 GGACTQ9BVM4 153 aa9.59□□□□□ -0.87
HERC1-205ENST00000559886 ESM1Q9NQ30 184 aa9.59□□□□□ -0.87
HERC1-205ENST00000559886 CLDN34H7C241 214 aa9.58□□□□□ -0.88
HERC1-205ENST00000559886 DLK1P80370 383 aa9.58□□□□□ -0.88
HERC1-205ENST00000559886 ZNF266Q14584 549 aa9.58□□□□□ -0.88
HERC1-205ENST00000559886 VWC2Q2TAL6 325 aa9.58□□□□□ -0.88
HERC1-205ENST00000559886 C19orf54Q5BKX5 351 aa9.58□□□□□ -0.88
HERC1-205ENST00000559886 UNQ5815/PRO19632Q6UWF5 114 aa9.58□□□□□ -0.88
HERC1-205ENST00000559886 OR1L6Q8NGR2 347 aa9.58□□□□□ -0.88
HERC1-205ENST00000559886 NPFFR1Q9GZQ6 430 aa9.58□□□□□ -0.88
HERC1-205ENST00000559886 BORCS7-ASMTA0A0B4J1R7 106 aa9.58□□□□□ -0.88
HERC1-205ENST00000559886 G3V318 75 aa9.58□□□□□ -0.88
HERC1-205ENST00000559886 CORTO00230 105 aa9.58□□□□□ -0.88
HERC1-205ENST00000559886 DEFA4P12838 97 aa9.58□□□□□ -0.88
HERC1-205ENST00000559886 ECSCRQ19T08 205 aa9.58□□□□□ -0.88
HERC1-205ENST00000559886 FAM110DQ8TAY7 271 aaPredicted RBP9.58□□□□□ -0.88
HERC1-205ENST00000559886 ZNF418Q8TF45 676 aaPredicted RBP9.58□□□□□ -0.88
HERC1-205ENST00000559886 TMEM147Q9BVK8 224 aa9.58□□□□□ -0.88
HERC1-205ENST00000559886 UQCC1Q9NVA1 299 aa9.58□□□□□ -0.88
HERC1-205ENST00000559886 ZNF580Q9UK33 172 aa9.58□□□□□ -0.88
HERC1-205ENST00000559886 CUBNO60494 3623 aa9.58□□□□□ -0.88
HERC1-205ENST00000559886 FN1P02751 2386 aaKnown RBP9.57□□□□□ -0.88
HERC1-205ENST00000559886 GPX4P36969 197 aaPredicted RBP9.57□□□□□ -0.88
HERC1-205ENST00000559886 UBA52P62987 128 aaKnown RBP9.57□□□□□ -0.88
HERC1-205ENST00000559886 IFITM2Q01629 132 aa9.57□□□□□ -0.88
HERC1-205ENST00000559886 CD69Q07108 199 aa9.57□□□□□ -0.88
HERC1-205ENST00000559886 SLC25A24Q6NUK1 477 aa9.57□□□□□ -0.88
HERC1-205ENST00000559886 OR5T1Q8NG75 326 aa9.57□□□□□ -0.88
HERC1-205ENST00000559886 CACNG8Q8WXS5 425 aa9.57□□□□□ -0.88
HERC1-205ENST00000559886 ST8SIA2Q92186 375 aa9.57□□□□□ -0.88
HERC1-205ENST00000559886 PRSS22Q9GZN4 317 aa9.57□□□□□ -0.88
HERC1-205ENST00000559886 ARV1Q9H2C2 271 aa9.57□□□□□ -0.88
HERC1-205ENST00000559886 TRAV41A0A0B4J266 112 aa9.57□□□□□ -0.88
HERC1-205ENST00000559886 FNDC10F2Z333 226 aa9.57□□□□□ -0.88
HERC1-205ENST00000559886 TRIM77I1YAP6 450 aa9.57□□□□□ -0.88
HERC1-205ENST00000559886 AP4M1O00189 453 aa9.57□□□□□ -0.88
HERC1-205ENST00000559886 TPT1P13693 172 aaKnown RBP9.57□□□□□ -0.88
HERC1-205ENST00000559886 ARSJQ5FYB0 599 aaPredicted RBP9.57□□□□□ -0.88
HERC1-205ENST00000559886 FANCD2OSQ96PS1 177 aa9.57□□□□□ -0.88
HERC1-205ENST00000559886 FNDC4Q9H6D8 234 aaPredicted RBP9.57□□□□□ -0.88
HERC1-205ENST00000559886 SLA2Q9H6Q3 261 aa9.57□□□□□ -0.88
HERC1-205ENST00000559886 IGLV11-55A0A075B6I3 123 aa9.56□□□□□ -0.88
HERC1-205ENST00000559886 CFDP00746 253 aaPredicted RBP9.56□□□□□ -0.88
HERC1-205ENST00000559886 HILS1P60008 231 aa9.56□□□□□ -0.88
HERC1-205ENST00000559886 EIF5AP63241 154 aaKnown RBP9.56□□□□□ -0.88
HERC1-205ENST00000559886 EXOSC2Q13868 293 aaKnown RBP9.56□□□□□ -0.88
HERC1-205ENST00000559886 MLANAQ16655 118 aa9.56□□□□□ -0.88
HERC1-205ENST00000559886 KLK9Q2XQG4 91 aa9.56□□□□□ -0.88
HERC1-205ENST00000559886 TEX261Q6UWH6 196 aa9.56□□□□□ -0.88
HERC1-205ENST00000559886 BAP18Q8IXM2 172 aa9.56□□□□□ -0.88
HERC1-205ENST00000559886 MISP3Q96FF7 219 aa9.56□□□□□ -0.88
HERC1-205ENST00000559886 PARD6GQ9BYG4 376 aaPredicted RBP9.56□□□□□ -0.88
HERC1-205ENST00000559886 ZNF702PQ9H963 129 aa9.56□□□□□ -0.88
HERC1-205ENST00000559886 LINC00527Q9UJ94 153 aa9.56□□□□□ -0.88
HERC1-205ENST00000559886 KLK9Q9UKQ9 250 aa9.56□□□□□ -0.88
HERC1-205ENST00000559886 UBE2L5PA0A1B0GUS4 154 aa9.56□□□□□ -0.88
HERC1-205ENST00000559886 CYB5BO43169 146 aa9.56□□□□□ -0.88
HERC1-205ENST00000559886 IFNA5P01569 189 aa9.56□□□□□ -0.88
HERC1-205ENST00000559886 PRH1P02810 166 aa9.56□□□□□ -0.88
HERC1-205ENST00000559886 FAM157CP0CG43 387 aa9.56□□□□□ -0.88
HERC1-205ENST00000559886 MDKP21741 143 aaPredicted RBP9.56□□□□□ -0.88
HERC1-205ENST00000559886 OPRK1P41145 380 aa9.56□□□□□ -0.88
HERC1-205ENST00000559886 NOL4LQ96MY1 436 aaPredicted RBP9.56□□□□□ -0.88
HERC1-205ENST00000559886 GINS3Q9BRX5 216 aa9.56□□□□□ -0.88
HERC1-205ENST00000559886 GAMTQ14353 236 aa9.55□□□□□ -0.88
HERC1-205ENST00000559886 SLC16A13Q7RTY0 426 aa9.55□□□□□ -0.88
HERC1-205ENST00000559886 Q8N2B8 174 aa9.55□□□□□ -0.88
HERC1-205ENST00000559886 WDR61Q9GZS3 305 aaKnown RBP9.55□□□□□ -0.88
HERC1-205ENST00000559886 NPVFQ9HCQ7 196 aa9.55□□□□□ -0.88
HERC1-205ENST00000559886 FAM181BA6NEQ2 426 aa9.55□□□□□ -0.88
HERC1-205ENST00000559886 I3L2K1 104 aa9.55□□□□□ -0.88
HERC1-205ENST00000559886 SOX15O60248 233 aa9.55□□□□□ -0.88
HERC1-205ENST00000559886 CRLF1O75462 422 aa9.55□□□□□ -0.88
HERC1-205ENST00000559886 RNASE1P07998 156 aaKnown RBP9.55□□□□□ -0.88
HERC1-205ENST00000559886 PPIFP30405 207 aaKnown RBP9.55□□□□□ -0.88
HERC1-205ENST00000559886 ETFRF1Q6IPR1 90 aa9.55□□□□□ -0.88
HERC1-205ENST00000559886 TREML4Q6UXN2 200 aa9.55□□□□□ -0.88
HERC1-205ENST00000559886 WDR83OSQ9Y284 106 aa9.55□□□□□ -0.88
HERC1-205ENST00000559886 RPS10-NUDT3A0A1W2PQS6 291 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 SMCO3A2RU48 225 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 TSPAN9O75954 239 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 MT-CO2P00403 227 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 HIST1H1BP16401 226 aaKnown RBP9.54□□□□□ -0.88
HERC1-205ENST00000559886 TMEM95Q3KNT9 176 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 HSD17B11Q8NBQ5 300 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 ZNF680Q8NEM1 530 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 SCGB1C1Q8TD33 95 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 TAF15Q92804 592 aaKnown RBP eCLIP9.54□□□□□ -0.88
HERC1-205ENST00000559886 THYN1Q9P016 225 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 NF1P21359 2839 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 TRBV9A0A0B4J1U6 114 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 K7EIM0 57 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 RPL15P61313 204 aaKnown RBP9.54□□□□□ -0.88
HERC1-205ENST00000559886 CFHR3Q02985 330 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 TMEM144Q7Z5S9 345 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 OR2T6Q8NHC8 308 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 PHYHIPLQ96FC7 376 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 SLC35E1Q96K37 410 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 JMJD8Q96S16 334 aa9.54□□□□□ -0.88
HERC1-205ENST00000559886 LSM4Q9Y4Z0 139 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 210.2 ms