RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 DEFB114Q30KQ6 69 aa11.22□□□□□ -0.61
RABGGTA-211ENST00000559850 FAM106AQ4KMX7 169 aa11.22□□□□□ -0.61
RABGGTA-211ENST00000559850 ZNF114Q8NC26 417 aa11.22□□□□□ -0.61
RABGGTA-211ENST00000559850 SIGLEC8Q9NYZ4 499 aa11.22□□□□□ -0.61
RABGGTA-211ENST00000559850 MLXQ9UH92 298 aa11.22□□□□□ -0.61
RABGGTA-211ENST00000559850 ZNF207O43670 478 aaKnown RBP11.21□□□□□ -0.61
RABGGTA-211ENST00000559850 LCN12Q6JVE5 192 aa11.21□□□□□ -0.61
RABGGTA-211ENST00000559850 UXS1Q8NBZ7 420 aa11.21□□□□□ -0.61
RABGGTA-211ENST00000559850 OR1L6Q8NGR2 347 aa11.21□□□□□ -0.61
RABGGTA-211ENST00000559850 WDR89Q96FK6 387 aaPredicted RBP11.21□□□□□ -0.61
RABGGTA-211ENST00000559850 ZNF414Q96IQ9 312 aa11.21□□□□□ -0.61
RABGGTA-211ENST00000559850 SCGB3A2Q96PL1 93 aa11.21□□□□□ -0.61
RABGGTA-211ENST00000559850 SDHCQ99643 169 aaPredicted RBP11.21□□□□□ -0.61
RABGGTA-211ENST00000559850 TMEM56-RWDD3S4R434 201 aa11.21□□□□□ -0.61
RABGGTA-211ENST00000559850 ZNF785A8K8V0 405 aa11.2□□□□□ -0.62
RABGGTA-211ENST00000559850 A8MWP6 167 aa11.2□□□□□ -0.62
RABGGTA-211ENST00000559850 RNASE2P10153 161 aaKnown RBP11.2□□□□□ -0.62
RABGGTA-211ENST00000559850 SNCAP37840 140 aa11.2□□□□□ -0.62
RABGGTA-211ENST00000559850 CCR6P51684 374 aa11.2□□□□□ -0.62
RABGGTA-211ENST00000559850 GUCA2BQ16661 112 aa11.2□□□□□ -0.62
RABGGTA-211ENST00000559850 LYZL2Q7Z4W2 148 aa11.2□□□□□ -0.62
RABGGTA-211ENST00000559850 SBSPONQ8IVN8 264 aa11.2□□□□□ -0.62
RABGGTA-211ENST00000559850 GALNT14Q96FL9 552 aa11.2□□□□□ -0.62
RABGGTA-211ENST00000559850 BSCL2Q96G97 398 aaPredicted RBP11.2□□□□□ -0.62
RABGGTA-211ENST00000559850 C20orf24Q9BUV8 137 aa11.2□□□□□ -0.62
RABGGTA-211ENST00000559850 ZNF436Q9C0F3 470 aaPredicted RBP11.2□□□□□ -0.62
RABGGTA-211ENST00000559850 ENY2Q9NPA8 101 aa11.2□□□□□ -0.62
RABGGTA-211ENST00000559850 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.2□□□□□ -0.62
RABGGTA-211ENST00000559850 KCNIP3Q9Y2W7 256 aa11.2□□□□□ -0.62
RABGGTA-211ENST00000559850 CTSGP08311 255 aa11.19□□□□□ -0.62
RABGGTA-211ENST00000559850 IGHV4-30-4P0DP06 118 aa11.19□□□□□ -0.62
RABGGTA-211ENST00000559850 INPP1P49441 399 aa11.19□□□□□ -0.62
RABGGTA-211ENST00000559850 MFAP4P55083 255 aa11.19□□□□□ -0.62
RABGGTA-211ENST00000559850 MLANAQ16655 118 aa11.19□□□□□ -0.62
RABGGTA-211ENST00000559850 TRIQKQ629K1 86 aa11.19□□□□□ -0.62
RABGGTA-211ENST00000559850 BTNL8Q6UX41 500 aa11.19□□□□□ -0.62
RABGGTA-211ENST00000559850 FAM219AQ8IW50 185 aa11.19□□□□□ -0.62
RABGGTA-211ENST00000559850 TMEM190Q8WZ59 177 aa11.19□□□□□ -0.62
RABGGTA-211ENST00000559850 WFDC10AQ9H1F0 79 aa11.19□□□□□ -0.62
RABGGTA-211ENST00000559850 MRPL36Q9P0J6 103 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-211ENST00000559850 SCAF4O95104 1147 aaKnown RBP11.18□□□□□ -0.62
RABGGTA-211ENST00000559850 CD7P09564 240 aa11.18□□□□□ -0.62
RABGGTA-211ENST00000559850 VAMP1P23763 118 aa11.18□□□□□ -0.62
RABGGTA-211ENST00000559850 SPCS3P61009 180 aa11.18□□□□□ -0.62
RABGGTA-211ENST00000559850 ANKRD55Q3KP44 614 aa11.18□□□□□ -0.62
RABGGTA-211ENST00000559850 TMEM61Q8N0U2 210 aa11.18□□□□□ -0.62
RABGGTA-211ENST00000559850 OR2K2Q8NGT1 345 aa11.18□□□□□ -0.62
RABGGTA-211ENST00000559850 NDUFA13Q9P0J0 144 aa11.18□□□□□ -0.62
RABGGTA-211ENST00000559850 UFC1Q9Y3C8 167 aa11.18□□□□□ -0.62
RABGGTA-211ENST00000559850 IGHV3-49A0A0A0MS15 119 aa11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 CEBPZOSA8MTT3 80 aa11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 INS-IGF2F8WCM5 200 aa11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 SULT1A3P0DMM9 295 aa11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 SULT1A4P0DMN0 295 aa11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 CD81P60033 236 aa11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 PPP1R1AQ13522 171 aa11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 AARDQ4LEZ3 155 aa11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 NMSQ5H8A3 153 aa11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 SPSB3Q6PJ21 355 aa11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 GTSCR1Q86UQ5 136 aa11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 LGI3Q8N145 548 aa11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 IL22RA2Q969J5 263 aa11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 FNDC4Q9H6D8 234 aaPredicted RBP11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 PALMDQ9NP74 551 aa11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 HEYLQ9NQ87 328 aaPredicted RBP11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 TECRQ9NZ01 308 aaKnown RBP11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 FLVCR2Q9UPI3 526 aa11.17□□□□□ -0.62
RABGGTA-211ENST00000559850 A0A0B4J2A0 478 aa11.16□□□□□ -0.62
RABGGTA-211ENST00000559850 NDUFA4O00483 81 aa11.16□□□□□ -0.62
RABGGTA-211ENST00000559850 NUPL2O15504 423 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-211ENST00000559850 GNG7O60262 68 aa11.16□□□□□ -0.62
RABGGTA-211ENST00000559850 YIF1AO95070 293 aa11.16□□□□□ -0.62
RABGGTA-211ENST00000559850 C8orf88P0DMB2 117 aa11.16□□□□□ -0.62
RABGGTA-211ENST00000559850 ANXA3P12429 323 aa11.16□□□□□ -0.62
RABGGTA-211ENST00000559850 IL7P13232 177 aa11.16□□□□□ -0.62
RABGGTA-211ENST00000559850 PVRIGQ6DKI7 326 aa11.16□□□□□ -0.62
RABGGTA-211ENST00000559850 OR52E5Q8NH55 327 aa11.16□□□□□ -0.62
RABGGTA-211ENST00000559850 SLC25A21Q9BQT8 299 aaPredicted RBP11.16□□□□□ -0.62
RABGGTA-211ENST00000559850 NEURL2Q9BR09 285 aa11.16□□□□□ -0.62
RABGGTA-211ENST00000559850 C19orf73Q9NVV2 129 aa11.16□□□□□ -0.62
RABGGTA-211ENST00000559850 MRPL27Q9P0M9 148 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-211ENST00000559850 SHPKQ9UHJ6 478 aa11.16□□□□□ -0.62
RABGGTA-211ENST00000559850 U3KQK5 164 aa11.16□□□□□ -0.62
RABGGTA-211ENST00000559850 NHLRC4P0CG21 123 aaPredicted RBP11.15□□□□□ -0.62
RABGGTA-211ENST00000559850 OPRK1P41145 380 aa11.15□□□□□ -0.62
RABGGTA-211ENST00000559850 SUB1P53999 127 aaKnown RBP eCLIP11.15□□□□□ -0.62
RABGGTA-211ENST00000559850 SMCO1Q147U7 214 aa11.15□□□□□ -0.62
RABGGTA-211ENST00000559850 BSXQ3C1V8 233 aa11.15□□□□□ -0.62
RABGGTA-211ENST00000559850 TMEM128Q5BJH2 165 aa11.15□□□□□ -0.62
RABGGTA-211ENST00000559850 CENPSQ8N2Z9 138 aa11.15□□□□□ -0.62
RABGGTA-211ENST00000559850 DEFB125Q8N687 156 aa11.15□□□□□ -0.62
RABGGTA-211ENST00000559850 DUSP18Q8NEJ0 188 aa11.15□□□□□ -0.62
RABGGTA-211ENST00000559850 TMEM170AQ8WVE7 144 aa11.15□□□□□ -0.62
RABGGTA-211ENST00000559850 ATP6V0BQ99437 205 aa11.15□□□□□ -0.62
RABGGTA-211ENST00000559850 TXN2Q99757 166 aa11.15□□□□□ -0.62
RABGGTA-211ENST00000559850 RBKSQ9H477 322 aa11.15□□□□□ -0.62
RABGGTA-211ENST00000559850 IGHV3OR16-13A0A075B7E8 117 aa11.14□□□□□ -0.63
RABGGTA-211ENST00000559850 IGHV3-74A0A0B4J1X5 117 aa11.14□□□□□ -0.63
RABGGTA-211ENST00000559850 SFT2D2O95562 160 aa11.14□□□□□ -0.63
RABGGTA-211ENST00000559850 FCGR2BP31994 310 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms