RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, human

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPB-206	ENST00000559790		A0A087WXM4	84 aa		13.78	□□□□□ -0.2
CDC42BPB-206	ENST00000559790		A0A0G2JRQ6	117 aa		13.78	□□□□□ -0.2
CDC42BPB-206	ENST00000559790	NUPL2	O15504	423 aa	Known RBP	13.78	□□□□□ -0.2
CDC42BPB-206	ENST00000559790	PI3	P19957	117 aa		13.78	□□□□□ -0.2
CDC42BPB-206	ENST00000559790	RND3	P61587	244 aa		13.78	□□□□□ -0.2
CDC42BPB-206	ENST00000559790	LAMTOR1	Q6IAA8	161 aa		13.78	□□□□□ -0.2
CDC42BPB-206	ENST00000559790	FAM24B	Q8N5W8	94 aa		13.78	□□□□□ -0.2
CDC42BPB-206	ENST00000559790	TMEM116	Q8NCL8	245 aa		13.78	□□□□□ -0.2
CDC42BPB-206	ENST00000559790	CMTM3	Q96MX0	182 aa		13.78	□□□□□ -0.2
CDC42BPB-206	ENST00000559790	NAA50	Q9GZZ1	169 aa	Known RBP	13.78	□□□□□ -0.2
CDC42BPB-206	ENST00000559790	VSIR	Q9H7M9	311 aa		13.78	□□□□□ -0.2
CDC42BPB-206	ENST00000559790		A0A0B4J293	547 aa		13.77	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	MFAP4	P55083	255 aa		13.77	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	HSPE1	P61604	102 aa	Known RBP	13.77	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	REL	Q04864	619 aa	Predicted RBP	13.77	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	TOMM20L	Q6UXN7	152 aa		13.77	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	H2BFWT	Q7Z2G1	175 aa		13.77	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	STPG3	Q8N7X2	389 aa		13.77	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	ST8SIA2	Q92186	375 aa		13.77	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	TXN2	Q99757	166 aa		13.77	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	HECTD4	Q9Y4D8	3996 aa		13.77	□□□□□ -0.21
CDC42BPB-206	ENST00000559790		A0A1B0GU03	582 aa		13.76	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	INS-IGF2	F8WCM5	200 aa		13.76	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	LY6G6C	O95867	125 aa		13.76	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	TSPAN5	P62079	268 aa		13.76	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	RNASE12	Q5GAN4	147 aa	Known RBP	13.76	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	OR4D10	Q8NGI6	311 aa		13.76	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.76	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	KLK11	Q9UBX7	282 aa		13.76	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	IGKV3-7	A0A075B6H7	116 aa		13.75	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	TNFAIP8	O95379	198 aa		13.75	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	SMIM18	P0DKX4	95 aa		13.75	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	RNASE2	P10153	161 aa	Known RBP	13.75	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	TFPI2	P48307	235 aa		13.75	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	LPCAT3	Q6P1A2	487 aa		13.75	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	RPP25L	Q8N5L8	163 aa	Known RBP	13.75	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	OR4A16	Q8NH70	328 aa		13.75	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	ST8SIA3	O43173	380 aa		13.74	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	CTF1	Q16619	201 aa		13.74	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	BSX	Q3C1V8	233 aa		13.74	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	GBGT1	Q8N5D6	347 aa		13.74	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	OR52I2	Q8NH67	350 aa		13.74	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	PINX1	Q96BK5	328 aa	Known RBP	13.74	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	HERC2	O95714	4834 aa		13.74	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	GNG7	O60262	68 aa		13.73	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	CD3D	P04234	171 aa		13.73	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	GIG44	P09565	113 aa	Predicted RBP	13.73	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	PIGP	P57054	158 aa		13.73	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	TCF24	Q7RTU0	167 aa		13.73	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	ABHD1	Q96SE0	405 aa		13.73	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	C11orf68	Q9H3H3	251 aa	Known RBP	13.73	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	TRAV14DV4	A0A0A6YYC5	116 aa		13.72	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	YIF1A	O95070	293 aa		13.72	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	GABARAP	O95166	117 aa		13.72	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	AARD	Q4LEZ3	155 aa		13.72	□□□□□ -0.21
CDC42BPB-206	ENST00000559790		Q6ZRM9	215 aa		13.72	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	LHFPL5	Q8TAF8	219 aa		13.72	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.72	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	ZNF486	Q96H40	463 aa	Predicted RBP	13.72	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	CSTL1	Q9H114	145 aa		13.72	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	MS4A6A	Q9H2W1	248 aa		13.72	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	MIXL1	Q9H2W2	232 aa		13.72	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	MTFP1	Q9UDX5	166 aa		13.72	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	IGHV3-66	A0A0C4DH42	116 aa		13.71	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	DEDD	O75618	318 aa		13.71	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	DFFB	O76075	338 aa		13.71	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	TMEM50A	O95807	157 aa		13.71	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	CD74	P04233	296 aa		13.71	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	UCP1	P25874	307 aa		13.71	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	PPP5C	P53041	499 aa		13.71	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	MLANA	Q16655	118 aa		13.71	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	ZNF600	Q6ZNG1	722 aa		13.71	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	ARRDC1	Q8N5I2	433 aa		13.71	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	GATAD1	Q8WUU5	269 aa		13.71	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	VCX3A	Q9NNX9	186 aa		13.71	□□□□□ -0.21
CDC42BPB-206	ENST00000559790	IGKV1-17	P01599	117 aa		13.7	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	S100G	P29377	79 aa		13.7	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	NANOS2	P60321	138 aa	Known RBP	13.7	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	SP6	Q3SY56	376 aa		13.7	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	RNASE10	Q5GAN6	216 aa	Known RBP	13.7	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	OR13C8	Q8NGS7	320 aa		13.7	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	C3orf85	A0A1B0GTC6	90 aa		13.69	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	SMIM31	A0A1B0GVY4	71 aa		13.69	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	MPTX1	A8MV57	137 aa		13.69	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	PGAM2	P15259	253 aa		13.69	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	ERH	P84090	104 aa	Known RBP	13.69	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	LEMD1	Q68G75	181 aa		13.69	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	SLC35G3	Q8N808	338 aa		13.69	□□□□□ -0.22
CDC42BPB-206	ENST00000559790		Q8NAQ8	132 aa		13.69	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	TMEM170A	Q8WVE7	144 aa		13.69	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	TRAV2	A0A0B4J234	112 aa		13.68	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	ETV6	P41212	452 aa		13.68	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	RORC	P51449	518 aa		13.68	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	AKR1C2	P52895	323 aa		13.68	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	DEFB131A	P59861	70 aa		13.68	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	PRR20E	P86478	221 aa		13.68	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	PRR20C	P86479	221 aa		13.68	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	PRR20D	P86480	221 aa		13.68	□□□□□ -0.22
CDC42BPB-206	ENST00000559790	PRR20B	P86481	221 aa		13.68	□□□□□ -0.22

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