RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 MLXQ9UH92 298 aa9.5□□□□□ -0.89
LRRC28-214ENST00000559433 A0A0G2JRQ6 117 aa9.49□□□□□ -0.89
LRRC28-214ENST00000559433 ZNF785A8K8V0 405 aa9.49□□□□□ -0.89
LRRC28-214ENST00000559433 F8W735 103 aaPredicted RBP9.49□□□□□ -0.89
LRRC28-214ENST00000559433 C3orf84H3BNL1 204 aa9.49□□□□□ -0.89
LRRC28-214ENST00000559433 HOXA1P49639 335 aaPredicted RBP9.49□□□□□ -0.89
LRRC28-214ENST00000559433 ANKRD55Q3KP44 614 aa9.49□□□□□ -0.89
LRRC28-214ENST00000559433 PYDC2Q56P42 97 aa9.49□□□□□ -0.89
LRRC28-214ENST00000559433 BTNL8Q6UX41 500 aa9.49□□□□□ -0.89
LRRC28-214ENST00000559433 RBPMS2Q6ZRY4 209 aaKnown RBP9.49□□□□□ -0.89
LRRC28-214ENST00000559433 SLC16A13Q7RTY0 426 aa9.49□□□□□ -0.89
LRRC28-214ENST00000559433 TMEM61Q8N0U2 210 aa9.49□□□□□ -0.89
LRRC28-214ENST00000559433 TMEM190Q8WZ59 177 aa9.49□□□□□ -0.89
LRRC28-214ENST00000559433 MARC2Q969Z3 335 aa9.49□□□□□ -0.89
LRRC28-214ENST00000559433 PINX1Q96BK5 328 aaKnown RBP9.49□□□□□ -0.89
LRRC28-214ENST00000559433 CHRDL1Q9BU40 450 aa9.49□□□□□ -0.89
LRRC28-214ENST00000559433 GAR1Q9NY12 217 aaKnown RBP9.49□□□□□ -0.89
LRRC28-214ENST00000559433 SCP2D1Q9UJQ7 156 aa9.49□□□□□ -0.89
LRRC28-214ENST00000559433 GPR132Q9UNW8 380 aa9.49□□□□□ -0.89
LRRC28-214ENST00000559433 CRYM-AS1A6NIL9 109 aa9.48□□□□□ -0.89
LRRC28-214ENST00000559433 I3L2K1 104 aa9.48□□□□□ -0.89
LRRC28-214ENST00000559433 NDUFA4O00483 81 aa9.48□□□□□ -0.89
LRRC28-214ENST00000559433 CDS2O95674 445 aa9.48□□□□□ -0.89
LRRC28-214ENST00000559433 MT-CO2P00403 227 aa9.48□□□□□ -0.89
LRRC28-214ENST00000559433 CD7P09564 240 aa9.48□□□□□ -0.89
LRRC28-214ENST00000559433 S100A5P33763 92 aa9.48□□□□□ -0.89
LRRC28-214ENST00000559433 SNCAP37840 140 aa9.48□□□□□ -0.89
LRRC28-214ENST00000559433 ELLP55199 621 aaPredicted RBP9.48□□□□□ -0.89
LRRC28-214ENST00000559433 DHODHQ02127 395 aa9.48□□□□□ -0.89
LRRC28-214ENST00000559433 GLYATL2Q8WU03 294 aa9.48□□□□□ -0.89
LRRC28-214ENST00000559433 RBPMSQ93062 196 aaKnown RBP9.48□□□□□ -0.89
LRRC28-214ENST00000559433 SPATA25Q9BR10 227 aa9.48□□□□□ -0.89
LRRC28-214ENST00000559433 C20orf24Q9BUV8 137 aa9.48□□□□□ -0.89
LRRC28-214ENST00000559433 RBM38Q9H0Z9 239 aaKnown RBP9.48□□□□□ -0.89
LRRC28-214ENST00000559433 ENY2Q9NPA8 101 aa9.48□□□□□ -0.89
LRRC28-214ENST00000559433 DAZ1Q9NQZ3 744 aaKnown RBP9.48□□□□□ -0.89
LRRC28-214ENST00000559433 MRPL27Q9P0M9 148 aaKnown RBP9.48□□□□□ -0.89
LRRC28-214ENST00000559433 IGHV3OR16-8A0A075B7F1 116 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 OR11H12B2RN74 326 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 NUPL2O15504 423 aaKnown RBP9.47□□□□□ -0.89
LRRC28-214ENST00000559433 SCAF4O95104 1147 aaKnown RBP9.47□□□□□ -0.89
LRRC28-214ENST00000559433 IGHV3-48P01763 117 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 C8orf88P0DMB2 117 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 ADMP35318 185 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 ETV6P41212 452 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 MFAP4P55083 255 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 PRR20EP86478 221 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 PRR20CP86479 221 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 PRR20DP86480 221 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 PRR20BP86481 221 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 PRR20AP86496 221 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 HAGHQ16775 308 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 TMEM268Q5VZI3 342 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 FAM219AQ8IW50 185 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 SELENOHQ8IZQ5 122 aaKnown RBP9.47□□□□□ -0.89
LRRC28-214ENST00000559433 OR52B4Q8NGK2 314 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 LHFPL5Q8TAF8 219 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 SCGB3A2Q96PL1 93 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 TM2D3Q9BRN9 247 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 V9GYH0 126 aa9.47□□□□□ -0.89
LRRC28-214ENST00000559433 INS-IGF2F8WCM5 200 aa9.46□□□□□ -0.9
LRRC28-214ENST00000559433 ZNF207O43670 478 aaKnown RBP9.46□□□□□ -0.9
LRRC28-214ENST00000559433 GNG7O60262 68 aa9.46□□□□□ -0.9
LRRC28-214ENST00000559433 CTSGP08311 255 aa9.46□□□□□ -0.9
LRRC28-214ENST00000559433 LYL1P12980 280 aa9.46□□□□□ -0.9
LRRC28-214ENST00000559433 FCGR2BP31994 310 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-214ENST00000559433 FAUP35544 74 aaKnown RBP9.46□□□□□ -0.9
LRRC28-214ENST00000559433 SUB1P53999 127 aaKnown RBP eCLIP9.46□□□□□ -0.9
LRRC28-214ENST00000559433 AP3S2P59780 193 aa9.46□□□□□ -0.9
LRRC28-214ENST00000559433 RELQ04864 619 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-214ENST00000559433 KLF9Q13886 244 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-214ENST00000559433 LAMTOR1Q6IAA8 161 aa9.46□□□□□ -0.9
LRRC28-214ENST00000559433 Q6ZRM9 215 aa9.46□□□□□ -0.9
LRRC28-214ENST00000559433 TOMM5Q8N4H5 51 aa9.46□□□□□ -0.9
LRRC28-214ENST00000559433 DEFB125Q8N687 156 aa9.46□□□□□ -0.9
LRRC28-214ENST00000559433 MUC7Q8TAX7 377 aa9.46□□□□□ -0.9
LRRC28-214ENST00000559433 TRIM63Q969Q1 353 aa9.46□□□□□ -0.9
LRRC28-214ENST00000559433 TXN2Q99757 166 aa9.46□□□□□ -0.9
LRRC28-214ENST00000559433 WFDC10AQ9H1F0 79 aa9.46□□□□□ -0.9
LRRC28-214ENST00000559433 SRD5A3Q9H8P0 318 aa9.46□□□□□ -0.9
LRRC28-214ENST00000559433 PRR13Q9NZ81 148 aa9.46□□□□□ -0.9
LRRC28-214ENST00000559433 CACNG5Q9UF02 275 aa9.46□□□□□ -0.9
LRRC28-214ENST00000559433 TRAV25A0A0B4J276 109 aa9.45□□□□□ -0.9
LRRC28-214ENST00000559433 ZNF701M0R085 212 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-214ENST00000559433 YIF1AO95070 293 aa9.45□□□□□ -0.9
LRRC28-214ENST00000559433 RNASE2P10153 161 aaKnown RBP9.45□□□□□ -0.9
LRRC28-214ENST00000559433 AKR1C4P17516 323 aa9.45□□□□□ -0.9
LRRC28-214ENST00000559433 SPCS3P61009 180 aa9.45□□□□□ -0.9
LRRC28-214ENST00000559433 ZNF79Q15937 498 aa9.45□□□□□ -0.9
LRRC28-214ENST00000559433 TMEM230Q96A57 120 aa9.45□□□□□ -0.9
LRRC28-214ENST00000559433 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-214ENST00000559433 KCNIP3Q9Y2W7 256 aa9.45□□□□□ -0.9
LRRC28-214ENST00000559433 TMEM56-RWDD3S4R434 201 aa9.45□□□□□ -0.9
LRRC28-214ENST00000559433 C15orf62A8K5M9 175 aa9.44□□□□□ -0.9
LRRC28-214ENST00000559433 K7EMT4 169 aa9.44□□□□□ -0.9
LRRC28-214ENST00000559433 CORTO00230 105 aa9.44□□□□□ -0.9
LRRC28-214ENST00000559433 TMEM187Q14656 261 aa9.44□□□□□ -0.9
LRRC28-214ENST00000559433 AARDQ4LEZ3 155 aa9.44□□□□□ -0.9
LRRC28-214ENST00000559433 SPANXN2Q5MJ10 180 aa9.44□□□□□ -0.9
LRRC28-214ENST00000559433 CCDC190Q86UF4 302 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms