RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ZC4H2Q9NQZ6 224 aa8.37□□□□□ -1.07
TPM1-217ENST00000559108 MGAM2Q2M2H8 2515 aa8.37□□□□□ -1.07
TPM1-217ENST00000559108 C15orf62A8K5M9 175 aa8.36□□□□□ -1.07
TPM1-217ENST00000559108 SNRPGP15A8MWD9 76 aa8.36□□□□□ -1.07
TPM1-217ENST00000559108 CCNKO75909 580 aa8.36□□□□□ -1.07
TPM1-217ENST00000559108 MBPP02686 304 aaPredicted RBP8.36□□□□□ -1.07
TPM1-217ENST00000559108 DEFA4P12838 97 aa8.36□□□□□ -1.07
TPM1-217ENST00000559108 ADMP35318 185 aa8.36□□□□□ -1.07
TPM1-217ENST00000559108 H2BFSP57053 126 aa8.36□□□□□ -1.07
TPM1-217ENST00000559108 ATP5G2Q06055 141 aa8.36□□□□□ -1.07
TPM1-217ENST00000559108 IAH1Q2TAA2 248 aaPredicted RBP8.36□□□□□ -1.07
TPM1-217ENST00000559108 TREML4Q6UXN2 200 aa8.36□□□□□ -1.07
TPM1-217ENST00000559108 SLC24A4Q8NFF2 622 aa8.36□□□□□ -1.07
TPM1-217ENST00000559108 DTD1Q8TEA8 209 aa8.36□□□□□ -1.07
TPM1-217ENST00000559108 MISP3Q96FF7 219 aa8.36□□□□□ -1.07
TPM1-217ENST00000559108 USMG5Q96IX5 58 aa8.36□□□□□ -1.07
TPM1-217ENST00000559108 PDCD10Q9BUL8 212 aa8.36□□□□□ -1.07
TPM1-217ENST00000559108 NBEAL1Q6ZS30 2694 aa8.35□□□□□ -1.07
TPM1-217ENST00000559108 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.35□□□□□ -1.07
TPM1-217ENST00000559108 C13orf42A0A1B0GVH6 325 aa8.35□□□□□ -1.07
TPM1-217ENST00000559108 PRSS46E5RG02 174 aa8.35□□□□□ -1.07
TPM1-217ENST00000559108 H3BP45 60 aa8.35□□□□□ -1.07
TPM1-217ENST00000559108 GOSR2O14653 212 aa8.35□□□□□ -1.07
TPM1-217ENST00000559108 PRAF2O60831 178 aa8.35□□□□□ -1.07
TPM1-217ENST00000559108 MT-CO2P00403 227 aa8.35□□□□□ -1.07
TPM1-217ENST00000559108 CXCL3P19876 107 aa8.35□□□□□ -1.07
TPM1-217ENST00000559108 HOXD3P31249 432 aaPredicted RBP8.35□□□□□ -1.07
TPM1-217ENST00000559108 MYCNOSP40205 109 aa8.35□□□□□ -1.07
TPM1-217ENST00000559108 RGS21Q2M5E4 152 aa8.35□□□□□ -1.07
TPM1-217ENST00000559108 CLEC19AQ6UXS0 136 aa8.35□□□□□ -1.07
TPM1-217ENST00000559108 OR4F17Q8NGA8 305 aa8.35□□□□□ -1.07
TPM1-217ENST00000559108 DLX4Q92988 240 aaPredicted RBP8.35□□□□□ -1.07
TPM1-217ENST00000559108 OR4F4Q96R69 305 aa8.35□□□□□ -1.07
TPM1-217ENST00000559108 CHRDL1Q9BU40 450 aa8.35□□□□□ -1.07
TPM1-217ENST00000559108 HEYLQ9NQ87 328 aaPredicted RBP8.35□□□□□ -1.07
TPM1-217ENST00000559108 A0A0G2JLM5 398 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 PMS2P5A8MQ11 134 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 FAM25EA8MYX2 175 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 FAM90A26D6RGX4 464 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 WRBO00258 174 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 SYNGR2O43760 224 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 SSSCA1O60232 199 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 SCGB1D2O95969 90 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 DHFRP00374 187 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 HSPB1P04792 205 aaKnown RBP8.34□□□□□ -1.07
TPM1-217ENST00000559108 HIST1H1BP16401 226 aaKnown RBP8.34□□□□□ -1.07
TPM1-217ENST00000559108 NPY1RP25929 384 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 GPR183P32249 361 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 ERHP84090 104 aaKnown RBP8.34□□□□□ -1.07
TPM1-217ENST00000559108 ZNF616Q08AN1 781 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 C2orf83Q53S99 150 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 HAPLN4Q86UW8 402 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 WFDC9Q8NEX5 89 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 OR11H7Q8NGC8 314 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 DCUN1D4Q92564 292 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 PINX1Q96BK5 328 aaKnown RBP8.34□□□□□ -1.07
TPM1-217ENST00000559108 GPN1Q9HCN4 374 aaPredicted RBP8.34□□□□□ -1.07
TPM1-217ENST00000559108 GSKIPQ9P0R6 139 aa8.34□□□□□ -1.07
TPM1-217ENST00000559108 PEF1Q9UBV8 284 aaKnown RBP8.34□□□□□ -1.07
TPM1-217ENST00000559108 IGHV3-35A0A0C4DH35 117 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 C5orf51A6NDU8 294 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 LINC01619G3V211 115 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 H0YIZ8 118 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 K7EPK0 472 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 OR2C1O95371 312 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 IFNA21P01568 189 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 PF4P02776 101 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 IGLL1P15814 213 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 SNCAP37840 140 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 NKX2-1P43699 371 aaPredicted RBP8.33□□□□□ -1.08
TPM1-217ENST00000559108 FCN2Q15485 313 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 OXLD1Q5BKU9 147 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 UNQ9165/PRO28630Q6UXU0 137 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 IL34Q6ZMJ4 242 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 ADAMTSL5Q6ZMM2 481 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 VN1R17PQ8TDU5 208 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 EEF1AKMT3Q96AZ1 226 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 C2orf50Q96LR7 162 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 C21orf62Q9NYP8 219 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 NOTCH3Q9UM47 2321 aa8.33□□□□□ -1.08
TPM1-217ENST00000559108 OR2T8A6NH00 312 aa8.32□□□□□ -1.08
TPM1-217ENST00000559108 G3V4G9 280 aa8.32□□□□□ -1.08
TPM1-217ENST00000559108 CLEC3BP05452 202 aa8.32□□□□□ -1.08
TPM1-217ENST00000559108 CTSGP08311 255 aa8.32□□□□□ -1.08
TPM1-217ENST00000559108 ARL3P36405 182 aa8.32□□□□□ -1.08
TPM1-217ENST00000559108 HTR2BP41595 481 aa8.32□□□□□ -1.08
TPM1-217ENST00000559108 ARL16Q0P5N6 197 aa8.32□□□□□ -1.08
TPM1-217ENST00000559108 RAB32Q13637 225 aa8.32□□□□□ -1.08
TPM1-217ENST00000559108 KLF5Q13887 457 aaPredicted RBP8.32□□□□□ -1.08
TPM1-217ENST00000559108 GSG1LQ6UXU4 331 aa8.32□□□□□ -1.08
TPM1-217ENST00000559108 C1QL4Q86Z23 238 aa8.32□□□□□ -1.08
TPM1-217ENST00000559108 RANGRFQ9HD47 186 aaPredicted RBP8.32□□□□□ -1.08
TPM1-217ENST00000559108 ENY2Q9NPA8 101 aa8.32□□□□□ -1.08
TPM1-217ENST00000559108 MGAT4CQ9UBM8 478 aa8.32□□□□□ -1.08
TPM1-217ENST00000559108 NOTCH1P46531 2555 aa8.31□□□□□ -1.08
TPM1-217ENST00000559108 TRBV7-1A0A0A6YYK4 115 aa8.31□□□□□ -1.08
TPM1-217ENST00000559108 PIGBOS1A0A0B4J2F0 54 aa8.31□□□□□ -1.08
TPM1-217ENST00000559108 TGOLN2O43493 480 aa8.31□□□□□ -1.08
TPM1-217ENST00000559108 SSNA1O43805 119 aa8.31□□□□□ -1.08
TPM1-217ENST00000559108 IFNA10P01566 189 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms