RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 SLIRPQ9GZT3 109 aaKnown RBP16.15■□□□□ 0.18
CRNDE-205ENST00000558952 HUWE1Q7Z6Z7 4374 aaKnown RBP16.15■□□□□ 0.18
CRNDE-205ENST00000558952 A0A0B4J293 547 aa16.14■□□□□ 0.17
CRNDE-205ENST00000558952 F8W735 103 aaPredicted RBP16.14■□□□□ 0.17
CRNDE-205ENST00000558952 ST8SIA3O43173 380 aa16.14■□□□□ 0.17
CRNDE-205ENST00000558952 MT-CO2P00403 227 aa16.14■□□□□ 0.17
CRNDE-205ENST00000558952 P0C879 139 aa16.14■□□□□ 0.17
CRNDE-205ENST00000558952 CITED4Q96RK1 184 aa16.14■□□□□ 0.17
CRNDE-205ENST00000558952 TXN2Q99757 166 aa16.14■□□□□ 0.17
CRNDE-205ENST00000558952 WFDC10AQ9H1F0 79 aa16.14■□□□□ 0.17
CRNDE-205ENST00000558952 ENY2Q9NPA8 101 aa16.14■□□□□ 0.17
CRNDE-205ENST00000558952 FABP12A6NFH5 140 aa16.13■□□□□ 0.17
CRNDE-205ENST00000558952 I3L2K1 104 aa16.13■□□□□ 0.17
CRNDE-205ENST00000558952 GSTZ1O43708 216 aaPredicted RBP16.13■□□□□ 0.17
CRNDE-205ENST00000558952 OR5AC1P0C628 307 aa16.13■□□□□ 0.17
CRNDE-205ENST00000558952 ADMP35318 185 aa16.13■□□□□ 0.17
CRNDE-205ENST00000558952 HOXA1P49639 335 aaPredicted RBP16.13■□□□□ 0.17
CRNDE-205ENST00000558952 LAMTOR1Q6IAA8 161 aa16.13■□□□□ 0.17
CRNDE-205ENST00000558952 RTBDNQ9BSG5 229 aaPredicted RBP16.13■□□□□ 0.17
CRNDE-205ENST00000558952 TMEM222Q9H0R3 208 aa16.13■□□□□ 0.17
CRNDE-205ENST00000558952 C5orf66Q9H5L9 145 aa16.13■□□□□ 0.17
CRNDE-205ENST00000558952 NAA60Q9H7X0 242 aa16.13■□□□□ 0.17
CRNDE-205ENST00000558952 SCP2D1Q9UJQ7 156 aa16.13■□□□□ 0.17
CRNDE-205ENST00000558952 ANKRD20A5PA0PJZ0 165 aa16.12■□□□□ 0.17
CRNDE-205ENST00000558952 CCDC160A6NGH7 325 aa16.12■□□□□ 0.17
CRNDE-205ENST00000558952 K7EMT4 169 aa16.12■□□□□ 0.17
CRNDE-205ENST00000558952 GNG7O60262 68 aa16.12■□□□□ 0.17
CRNDE-205ENST00000558952 CTSGP08311 255 aa16.12■□□□□ 0.17
CRNDE-205ENST00000558952 FCGR2BP31994 310 aaPredicted RBP16.12■□□□□ 0.17
CRNDE-205ENST00000558952 TNFSF8P32971 234 aa16.12■□□□□ 0.17
CRNDE-205ENST00000558952 SUB1P53999 127 aaKnown RBP eCLIP16.12■□□□□ 0.17
CRNDE-205ENST00000558952 DHODHQ02127 395 aa16.12■□□□□ 0.17
CRNDE-205ENST00000558952 FAM219AQ8IW50 185 aa16.12■□□□□ 0.17
CRNDE-205ENST00000558952 OR51S1Q8NGJ8 323 aa16.12■□□□□ 0.17
CRNDE-205ENST00000558952 GPR132Q9UNW8 380 aa16.12■□□□□ 0.17
CRNDE-205ENST00000558952 IGHV3OR16-8A0A075B7F1 116 aa16.11■□□□□ 0.17
CRNDE-205ENST00000558952 C15orf62A8K5M9 175 aa16.11■□□□□ 0.17
CRNDE-205ENST00000558952 INS-IGF2F8WCM5 200 aa16.11■□□□□ 0.17
CRNDE-205ENST00000558952 CORTO00230 105 aa16.11■□□□□ 0.17
CRNDE-205ENST00000558952 YIF1AO95070 293 aa16.11■□□□□ 0.17
CRNDE-205ENST00000558952 CDS2O95674 445 aa16.11■□□□□ 0.17
CRNDE-205ENST00000558952 LINC00322Q6ZN03 302 aaPredicted RBP16.11■□□□□ 0.17
CRNDE-205ENST00000558952 RBPMSQ93062 196 aaKnown RBP16.11■□□□□ 0.17
CRNDE-205ENST00000558952 SCGB3A2Q96PL1 93 aa16.11■□□□□ 0.17
CRNDE-205ENST00000558952 MCUBQ9NWR8 336 aa16.11■□□□□ 0.17
CRNDE-205ENST00000558952 TENM3Q9P273 2699 aa16.11■□□□□ 0.17
CRNDE-205ENST00000558952 A0A0G2JRQ6 117 aa16.1■□□□□ 0.17
CRNDE-205ENST00000558952 CRYM-AS1A6NIL9 109 aa16.1■□□□□ 0.17
CRNDE-205ENST00000558952 ZNF207O43670 478 aaKnown RBP16.1■□□□□ 0.17
CRNDE-205ENST00000558952 IGHV3-48P01763 117 aa16.1■□□□□ 0.17
CRNDE-205ENST00000558952 ETV6P41212 452 aa16.1■□□□□ 0.17
CRNDE-205ENST00000558952 DUSP18Q8NEJ0 188 aa16.1■□□□□ 0.17
CRNDE-205ENST00000558952 GLYATL2Q8WU03 294 aa16.1■□□□□ 0.17
CRNDE-205ENST00000558952 SPAG8Q99932 426 aaPredicted RBP16.1■□□□□ 0.17
CRNDE-205ENST00000558952 NXF2Q9GZY0 626 aaKnown RBP16.1■□□□□ 0.17
CRNDE-205ENST00000558952 RBMY1BA6NDE4 496 aaKnown RBP16.09■□□□□ 0.17
CRNDE-205ENST00000558952 RBMY1EA6NEQ0 496 aaKnown RBP16.09■□□□□ 0.17
CRNDE-205ENST00000558952 RBMY1DP0C7P1 496 aaKnown RBP16.09■□□□□ 0.17
CRNDE-205ENST00000558952 LYL1P12980 280 aa16.09■□□□□ 0.17
CRNDE-205ENST00000558952 NPBWR1P48145 328 aa16.09■□□□□ 0.17
CRNDE-205ENST00000558952 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.09■□□□□ 0.17
CRNDE-205ENST00000558952 KCNIP3Q9Y2W7 256 aa16.09■□□□□ 0.17
CRNDE-205ENST00000558952 TSPAN4O14817 238 aa16.08■□□□□ 0.16
CRNDE-205ENST00000558952 TMEM268Q5VZI3 342 aa16.08■□□□□ 0.16
CRNDE-205ENST00000558952 SELENOHQ8IZQ5 122 aaKnown RBP16.08■□□□□ 0.16
CRNDE-205ENST00000558952 SOSTQ9BQB4 213 aa16.08■□□□□ 0.16
CRNDE-205ENST00000558952 HIPK2Q9H2X6 1198 aa16.08■□□□□ 0.16
CRNDE-205ENST00000558952 RNASE2P10153 161 aaKnown RBP16.07■□□□□ 0.16
CRNDE-205ENST00000558952 S100A5P33763 92 aa16.07■□□□□ 0.16
CRNDE-205ENST00000558952 FAUP35544 74 aaKnown RBP16.07■□□□□ 0.16
CRNDE-205ENST00000558952 SPCS3P61009 180 aa16.07■□□□□ 0.16
CRNDE-205ENST00000558952 CASC10Q5T4H9 136 aa16.07■□□□□ 0.16
CRNDE-205ENST00000558952 LHFPL5Q8TAF8 219 aa16.07■□□□□ 0.16
CRNDE-205ENST00000558952 EDA2RQ9HAV5 297 aa16.07■□□□□ 0.16
CRNDE-205ENST00000558952 RETNQ9HD89 108 aa16.07■□□□□ 0.16
CRNDE-205ENST00000558952 STAB2Q8WWQ8 2551 aa16.06■□□□□ 0.16
CRNDE-205ENST00000558952 OR4C46A6NHA9 309 aa16.06■□□□□ 0.16
CRNDE-205ENST00000558952 PYDC2Q56P42 97 aa16.06■□□□□ 0.16
CRNDE-205ENST00000558952 Q6ZRM9 215 aa16.06■□□□□ 0.16
CRNDE-205ENST00000558952 TMEM116Q8NCL8 245 aa16.06■□□□□ 0.16
CRNDE-205ENST00000558952 OR52E5Q8NH55 327 aa16.06■□□□□ 0.16
CRNDE-205ENST00000558952 OR10C1Q96KK4 312 aa16.06■□□□□ 0.16
CRNDE-205ENST00000558952 GINS3Q9BRX5 216 aa16.06■□□□□ 0.16
CRNDE-205ENST00000558952 GGTLC1Q9BX51 225 aa16.06■□□□□ 0.16
CRNDE-205ENST00000558952 CACNG5Q9UF02 275 aa16.06■□□□□ 0.16
CRNDE-205ENST00000558952 SMPXQ9UHP9 88 aa16.06■□□□□ 0.16
CRNDE-205ENST00000558952 LOC102724200A0A096LPH7 203 aaPredicted RBP16.05■□□□□ 0.16
CRNDE-205ENST00000558952 IGHV7-4-1A0A0J9YVY3 117 aa16.05■□□□□ 0.16
CRNDE-205ENST00000558952 SCGB2A1O75556 95 aa16.05■□□□□ 0.16
CRNDE-205ENST00000558952 OPRK1P41145 380 aa16.05■□□□□ 0.16
CRNDE-205ENST00000558952 AP3S2P59780 193 aa16.05■□□□□ 0.16
CRNDE-205ENST00000558952 RHPN1-AS1Q9BWJ2 59 aa16.05■□□□□ 0.16
CRNDE-205ENST00000558952 TMEM56-RWDD3S4R434 201 aa16.05■□□□□ 0.16
CRNDE-205ENST00000558952 KMT2CQ8NEZ4 4911 aaKnown RBP16.04■□□□□ 0.16
CRNDE-205ENST00000558952 TRAV14DV4A0A0A6YYC5 116 aa16.04■□□□□ 0.16
CRNDE-205ENST00000558952 AKR1C4P17516 323 aa16.04■□□□□ 0.16
CRNDE-205ENST00000558952 BMI1P35226 326 aa16.04■□□□□ 0.16
CRNDE-205ENST00000558952 HTR2BP41595 481 aa16.04■□□□□ 0.16
CRNDE-205ENST00000558952 AARDQ4LEZ3 155 aa16.04■□□□□ 0.16
CRNDE-205ENST00000558952 PVRIGQ6DKI7 326 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms