RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 OR4S2Q8NH73 311 aa12.34□□□□□ -0.43
CDC42BPB-203ENST00000558867 RNASE11Q8TAA1 199 aaKnown RBP12.34□□□□□ -0.43
CDC42BPB-203ENST00000558867 SCARB1Q8WTV0 552 aa12.34□□□□□ -0.43
CDC42BPB-203ENST00000558867 ST8SIA2Q92186 375 aa12.34□□□□□ -0.43
CDC42BPB-203ENST00000558867 ARPC1AQ92747 370 aa12.34□□□□□ -0.43
CDC42BPB-203ENST00000558867 RAB40CQ96S21 281 aa12.34□□□□□ -0.43
CDC42BPB-203ENST00000558867 CSMD3Q7Z407 3707 aa12.33□□□□□ -0.44
CDC42BPB-203ENST00000558867 NBR2O15453 112 aa12.33□□□□□ -0.44
CDC42BPB-203ENST00000558867 S1PR2O95136 353 aa12.33□□□□□ -0.44
CDC42BPB-203ENST00000558867 CFDP00746 253 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPB-203ENST00000558867 RPL39P5Q59GN2 51 aa12.33□□□□□ -0.44
CDC42BPB-203ENST00000558867 CLLU1Q5K131 121 aa12.33□□□□□ -0.44
CDC42BPB-203ENST00000558867 Q6ZRM9 215 aa12.33□□□□□ -0.44
CDC42BPB-203ENST00000558867 LYRM2Q9NU23 88 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPB-203ENST00000558867 CACNG5Q9UF02 275 aa12.33□□□□□ -0.44
CDC42BPB-203ENST00000558867 IGHV7-81A0A0B4J1V7 117 aa12.32□□□□□ -0.44
CDC42BPB-203ENST00000558867 A0A1W2PN81 502 aa12.32□□□□□ -0.44
CDC42BPB-203ENST00000558867 MARCH11A6NNE9 402 aa12.32□□□□□ -0.44
CDC42BPB-203ENST00000558867 HSPB1P04792 205 aaKnown RBP12.32□□□□□ -0.44
CDC42BPB-203ENST00000558867 RRASP10301 218 aa12.32□□□□□ -0.44
CDC42BPB-203ENST00000558867 TPT1P13693 172 aaKnown RBP12.32□□□□□ -0.44
CDC42BPB-203ENST00000558867 CHRNA7P36544 502 aa12.32□□□□□ -0.44
CDC42BPB-203ENST00000558867 BAXQ07812 192 aa12.32□□□□□ -0.44
CDC42BPB-203ENST00000558867 ECSCRQ19T08 205 aa12.32□□□□□ -0.44
CDC42BPB-203ENST00000558867 C5orf64Q2M2E5 130 aa12.32□□□□□ -0.44
CDC42BPB-203ENST00000558867 OR2C3Q8N628 320 aa12.32□□□□□ -0.44
CDC42BPB-203ENST00000558867 SLC25A31Q9H0C2 315 aa12.32□□□□□ -0.44
CDC42BPB-203ENST00000558867 CYTL1Q9NRR1 136 aa12.32□□□□□ -0.44
CDC42BPB-203ENST00000558867 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPB-203ENST00000558867 HSPB7Q9UBY9 170 aa12.32□□□□□ -0.44
CDC42BPB-203ENST00000558867 FOXA2Q9Y261 457 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPB-203ENST00000558867 IGHV4OR15-8A0A075B7B6 117 aa12.31□□□□□ -0.44
CDC42BPB-203ENST00000558867 A0A087WW49 117 aa12.31□□□□□ -0.44
CDC42BPB-203ENST00000558867 MED6O75586 246 aa12.31□□□□□ -0.44
CDC42BPB-203ENST00000558867 NQO2P16083 231 aa12.31□□□□□ -0.44
CDC42BPB-203ENST00000558867 POLR2GP62487 172 aaKnown RBP eCLIP12.31□□□□□ -0.44
CDC42BPB-203ENST00000558867 H2BFWTQ7Z2G1 175 aa12.31□□□□□ -0.44
CDC42BPB-203ENST00000558867 AIFM2Q9BRQ8 373 aa12.31□□□□□ -0.44
CDC42BPB-203ENST00000558867 ZNF471Q9BX82 626 aaPredicted RBP12.31□□□□□ -0.44
CDC42BPB-203ENST00000558867 C19orf73Q9NVV2 129 aa12.31□□□□□ -0.44
CDC42BPB-203ENST00000558867 RPS10-NUDT3A0A1W2PQS6 291 aa12.3□□□□□ -0.44
CDC42BPB-203ENST00000558867 WRBO00258 174 aa12.3□□□□□ -0.44
CDC42BPB-203ENST00000558867 SYNGR2O43760 224 aa12.3□□□□□ -0.44
CDC42BPB-203ENST00000558867 FCGR3BO75015 233 aa12.3□□□□□ -0.44
CDC42BPB-203ENST00000558867 KRASP01116 189 aa12.3□□□□□ -0.44
CDC42BPB-203ENST00000558867 G6PCP35575 357 aa12.3□□□□□ -0.44
CDC42BPB-203ENST00000558867 HTR2BP41595 481 aa12.3□□□□□ -0.44
CDC42BPB-203ENST00000558867 PAX9P55771 341 aa12.3□□□□□ -0.44
CDC42BPB-203ENST00000558867 VAMP2P63027 116 aa12.3□□□□□ -0.44
CDC42BPB-203ENST00000558867 PLGLAQ15195 96 aa12.3□□□□□ -0.44
CDC42BPB-203ENST00000558867 BAP18Q8IXM2 172 aa12.3□□□□□ -0.44
CDC42BPB-203ENST00000558867 ZNF383Q8NA42 475 aa12.3□□□□□ -0.44
CDC42BPB-203ENST00000558867 ABHD5Q8WTS1 349 aa12.3□□□□□ -0.44
CDC42BPB-203ENST00000558867 SMIM8Q96KF7 97 aa12.3□□□□□ -0.44
CDC42BPB-203ENST00000558867 TUBA4BQ9H853 241 aa12.3□□□□□ -0.44
CDC42BPB-203ENST00000558867 LINC00862A6NCI5 91 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 SSSCA1O60232 199 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 ATP6V1G1O75348 118 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 SCAF4O95104 1147 aaKnown RBP12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 SPDEFO95238 335 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 HRASP01112 189 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 CT45A6P0DMU7 189 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 CT45A5P0DMU8 189 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 CT45A7P0DMV0 189 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 ERVK-16P61578 105 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 TNFRSF9Q07011 255 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 RTL8BQ17RB0 113 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 OR2B11Q5JQS5 317 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 Q8N1Y9 231 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 UBAC2Q8NBM4 344 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 NPBQ8NG41 125 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 OR5AN1Q8NGI8 311 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 OR52E5Q8NH55 327 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 ARV1Q9H2C2 271 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 SLC25A32Q9H2D1 315 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 FBXL17Q9UF56 701 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 STARD9Q9P2P6 4700 aa12.29□□□□□ -0.44
CDC42BPB-203ENST00000558867 TMEM50AO95807 157 aa12.28□□□□□ -0.44
CDC42BPB-203ENST00000558867 IGLV1-51P01701 117 aa12.28□□□□□ -0.44
CDC42BPB-203ENST00000558867 IL6RP08887 468 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPB-203ENST00000558867 FGF2P09038 288 aa12.28□□□□□ -0.44
CDC42BPB-203ENST00000558867 ZP3P21754 424 aa12.28□□□□□ -0.44
CDC42BPB-203ENST00000558867 RAB14P61106 215 aa12.28□□□□□ -0.44
CDC42BPB-203ENST00000558867 EWSR1Q01844 656 aaKnown RBP eCLIP12.28□□□□□ -0.44
CDC42BPB-203ENST00000558867 EIF5AL1Q6IS14 154 aaKnown RBP12.28□□□□□ -0.44
CDC42BPB-203ENST00000558867 GTSCR1Q86UQ5 136 aa12.28□□□□□ -0.44
CDC42BPB-203ENST00000558867 TMEM252Q8N6L7 170 aa12.28□□□□□ -0.44
CDC42BPB-203ENST00000558867 OSR1Q8TAX0 266 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPB-203ENST00000558867 LRRC20Q8TCA0 184 aa12.28□□□□□ -0.44
CDC42BPB-203ENST00000558867 CIB3Q96Q77 187 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPB-203ENST00000558867 ZC4H2Q9NQZ6 224 aa12.28□□□□□ -0.44
CDC42BPB-203ENST00000558867 TPSG1Q9NRR2 321 aa12.28□□□□□ -0.44
CDC42BPB-203ENST00000558867 MED9Q9NWA0 146 aa12.28□□□□□ -0.44
CDC42BPB-203ENST00000558867 NDUFA3O95167 84 aa12.27□□□□□ -0.45
CDC42BPB-203ENST00000558867 APOA2P02652 100 aa12.27□□□□□ -0.45
CDC42BPB-203ENST00000558867 CNTFRP26992 372 aa12.27□□□□□ -0.45
CDC42BPB-203ENST00000558867 CRIP2P52943 208 aaPredicted RBP12.27□□□□□ -0.45
CDC42BPB-203ENST00000558867 LINC00205P59089 165 aa12.27□□□□□ -0.45
CDC42BPB-203ENST00000558867 TPPP2P59282 170 aa12.27□□□□□ -0.45
CDC42BPB-203ENST00000558867 UBE2KP61086 200 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms