RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 ZNF414Q96IQ9 312 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 RARRES2Q99969 163 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 SRSF8Q9BRL6 282 aaKnown RBP7.05□□□□□ -1.28
SPG11-212ENST00000558790 COMMD5Q9GZQ3 224 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 CCDC90BQ9GZT6 254 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 DCSTAMPQ9H295 470 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 VCXQ9H320 206 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 CCL28Q9NRJ3 127 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 NDUFB11Q9NX14 153 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 TPRKBQ9Y3C4 175 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 SRRM2Q9UQ35 2752 aaKnown RBP7.04□□□□□ -1.28
SPG11-212ENST00000558790 MPTX1A8MV57 137 aa7.04□□□□□ -1.28
SPG11-212ENST00000558790 UPK2O00526 184 aa7.04□□□□□ -1.28
SPG11-212ENST00000558790 RBFOX2O43251 390 aaKnown RBP eCLIP7.04□□□□□ -1.28
SPG11-212ENST00000558790 IFNA4P05014 189 aa7.04□□□□□ -1.28
SPG11-212ENST00000558790 NQO2P16083 231 aa7.04□□□□□ -1.28
SPG11-212ENST00000558790 TFPI2P48307 235 aa7.04□□□□□ -1.28
SPG11-212ENST00000558790 AQP4P55087 323 aa7.04□□□□□ -1.28
SPG11-212ENST00000558790 GNG2P59768 71 aa7.04□□□□□ -1.28
SPG11-212ENST00000558790 MSMO1Q15800 293 aa7.04□□□□□ -1.28
SPG11-212ENST00000558790 TBCEQ15813 527 aaPredicted RBP7.04□□□□□ -1.28
SPG11-212ENST00000558790 POU2AF1Q16633 256 aa7.04□□□□□ -1.28
SPG11-212ENST00000558790 SPSB3Q6PJ21 355 aa7.04□□□□□ -1.28
SPG11-212ENST00000558790 ZNF773Q6PK81 442 aa7.04□□□□□ -1.28
SPG11-212ENST00000558790 PRSS48Q7RTY5 328 aa7.04□□□□□ -1.28
SPG11-212ENST00000558790 UBAC2Q8NBM4 344 aa7.04□□□□□ -1.28
SPG11-212ENST00000558790 OR11H2Q8NH07 326 aa7.04□□□□□ -1.28
SPG11-212ENST00000558790 RNF2Q99496 336 aa7.04□□□□□ -1.28
SPG11-212ENST00000558790 C6orf62Q9GZU0 229 aaPredicted RBP7.04□□□□□ -1.28
SPG11-212ENST00000558790 CSTL1Q9H114 145 aa7.04□□□□□ -1.28
SPG11-212ENST00000558790 C21orf62Q9NYP8 219 aa7.04□□□□□ -1.28
SPG11-212ENST00000558790 LRP1BQ9NZR2 4599 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 IGHV3-49A0A0A0MS15 119 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 C15orf62A8K5M9 175 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 K7EIM0 57 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 EBAG9O00559 213 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 CYB5BO43169 146 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 HPRT1P00492 218 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 CA1P00915 261 aaPredicted RBP7.03□□□□□ -1.28
SPG11-212ENST00000558790 PPYP01298 95 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 MBPP02686 304 aaPredicted RBP7.03□□□□□ -1.28
SPG11-212ENST00000558790 SERPINE2P07093 398 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 FGF2P09038 288 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 OR13C7P0DN81 318 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 FCGR2CP31995 323 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 ARPC4P59998 168 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 THOC7Q6I9Y2 204 aaKnown RBP7.03□□□□□ -1.28
SPG11-212ENST00000558790 C22orf42Q6IC83 251 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 SLC25A24Q6NUK1 477 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 ZNF367Q7RTV3 350 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 DMBX1Q8NFW5 382 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 OR51H1Q8NH63 302 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 LGALS14Q8TCE9 139 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 SCARB1Q8WTV0 552 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 APLNQ9ULZ1 77 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 ETV7Q9Y603 341 aa7.03□□□□□ -1.28
SPG11-212ENST00000558790 F11RQ9Y624 299 aaKnown RBP7.03□□□□□ -1.28
SPG11-212ENST00000558790 IGKV3-7A0A075B6H7 116 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 IGHV7-4-1A0A0J9YVY3 117 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 A0A1B0GVY2 172 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 TRDV1A0A1B0GX56 115 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 IGLL5B9A064 214 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 K7EMT4 169 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 CHEK1O14757 476 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 TRAPPC2P0DI81 140 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 TRAPPC2BP0DI82 140 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 TCTAP57738 103 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 FXYD4P59646 89 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 CATR1Q13166 79 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 Q56UQ5 140 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 ZNF818PQ6ZRF7 136 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 GVQW1Q8N7I0 195 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 BEST4Q8NFU0 473 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 LSM10Q969L4 123 aaKnown RBP7.02□□□□□ -1.29
SPG11-212ENST00000558790 ATP6V0BQ99437 205 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 RHPN1-AS1Q9BWJ2 59 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 KRTAP4-11Q9BYQ6 195 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 SLC5A7Q9GZV3 580 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 COMMD9Q9P000 198 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 C11orf21Q9P2W6 132 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 SMPXQ9UHP9 88 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 NACAE9PAV3 2078 aa7.02□□□□□ -1.29
SPG11-212ENST00000558790 IGHV3OR16-13A0A075B7E8 117 aa7.01□□□□□ -1.29
SPG11-212ENST00000558790 IGHV3-74A0A0B4J1X5 117 aa7.01□□□□□ -1.29
SPG11-212ENST00000558790 TEX50A0A1B0GTY4 177 aa7.01□□□□□ -1.29
SPG11-212ENST00000558790 XRCC3O43542 346 aa7.01□□□□□ -1.29
SPG11-212ENST00000558790 CTSGP08311 255 aa7.01□□□□□ -1.29
SPG11-212ENST00000558790 AADACL3Q5VUY0 350 aa7.01□□□□□ -1.29
SPG11-212ENST00000558790 SUMO4Q6EEV6 95 aa7.01□□□□□ -1.29
SPG11-212ENST00000558790 HSD17B13Q7Z5P4 300 aaPredicted RBP7.01□□□□□ -1.29
SPG11-212ENST00000558790 TMEM17Q86X19 198 aa7.01□□□□□ -1.29
SPG11-212ENST00000558790 GBGT1Q8N5D6 347 aa7.01□□□□□ -1.29
SPG11-212ENST00000558790 Q8NAQ8 132 aa7.01□□□□□ -1.29
SPG11-212ENST00000558790 TMEM116Q8NCL8 245 aa7.01□□□□□ -1.29
SPG11-212ENST00000558790 OR1L8Q8NGR8 309 aa7.01□□□□□ -1.29
SPG11-212ENST00000558790 OR10C1Q96KK4 312 aa7.01□□□□□ -1.29
SPG11-212ENST00000558790 HINT2Q9BX68 163 aa7.01□□□□□ -1.29
SPG11-212ENST00000558790 PLEKHA2Q9HB19 425 aa7.01□□□□□ -1.29
SPG11-212ENST00000558790 NDUFA4L2Q9NRX3 87 aa7.01□□□□□ -1.29
SPG11-212ENST00000558790 RHBDL2Q9NX52 303 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms