RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 GIMAP1Q8WWP7 306 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 RPL36ALQ969Q0 106 aaKnown RBP3.88□□□□□ -1.79
LRRC28-208ENST00000558771 RAB3CQ96E17 227 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 CMTM3Q96MX0 182 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 C9orf16Q9BUW7 83 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 SLC25A32Q9H2D1 315 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 CLEC5AQ9NY25 188 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 BET1LQ9NYM9 111 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 C21orf62Q9NYP8 219 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 MGAT4CQ9UBM8 478 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 TBC1D24Q9ULP9 559 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 SPATA2Q9UM82 520 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 A0A075B6Q4 140 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 TRAV14DV4A0A0A6YYC5 116 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 TMEM272A0A1B0GTI8 110 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 K7EIM0 57 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 DNASE2O00115 360 aaPredicted RBP3.87□□□□□ -1.79
LRRC28-208ENST00000558771 UPK2O00526 184 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 MFNGO00587 321 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 NUPL2O15504 423 aaKnown RBP3.87□□□□□ -1.79
LRRC28-208ENST00000558771 DENRO43583 198 aaKnown RBP3.87□□□□□ -1.79
LRRC28-208ENST00000558771 CIB2O75838 187 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 DFFBO76075 338 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 SLC22A5O76082 557 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 YIF1AO95070 293 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 SERPINE2P07093 398 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 CTSGP08311 255 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 UCHL1P09936 223 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 SPP1P10451 314 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 NPY1RP25929 384 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 WT1-ASQ06250 92 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 RAB11BQ15907 218 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 SSX1Q16384 188 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 Q56UQ5 140 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 TMEM41BQ5BJD5 291 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 MORN3Q6PF18 240 aaPredicted RBP3.87□□□□□ -1.79
LRRC28-208ENST00000558771 Q6ZS49 121 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 TRPT1Q86TN4 253 aaKnown RBP3.87□□□□□ -1.79
LRRC28-208ENST00000558771 CCDC28AQ8IWP9 274 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 MS4A15Q8N5U1 240 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 NANOGP1Q8N7R0 232 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 CSNK1G2-AS1Q8NCQ2 148 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 ZNF555Q8NEP9 628 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 FAM3DQ96BQ1 224 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 OR10C1Q96KK4 312 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 ATP6V0BQ99437 205 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 HSD17B10Q99714 261 aaKnown RBP3.87□□□□□ -1.79
LRRC28-208ENST00000558771 SRSF8Q9BRL6 282 aaKnown RBP3.87□□□□□ -1.79
LRRC28-208ENST00000558771 CENPOQ9BU64 300 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 MS4A6AQ9H2W1 248 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 HRASLSQ9HDD0 168 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 TMEM14BQ9NUH8 114 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 SMPD3Q9NY59 655 aaPredicted RBP3.87□□□□□ -1.79
LRRC28-208ENST00000558771 TAS2R8Q9NYW2 309 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 AK6Q9Y3D8 172 aaKnown RBP3.87□□□□□ -1.79
LRRC28-208ENST00000558771 OR2W1Q9Y3N9 320 aa3.87□□□□□ -1.79
LRRC28-208ENST00000558771 KNCNA6PVL3 124 aa3.86□□□□□ -1.79
LRRC28-208ENST00000558771 CYB5BO43169 146 aa3.86□□□□□ -1.79
LRRC28-208ENST00000558771 ST8SIA3O43173 380 aa3.86□□□□□ -1.79
LRRC28-208ENST00000558771 TNFSF12O43508 249 aa3.86□□□□□ -1.79
LRRC28-208ENST00000558771 APOHP02749 345 aaPredicted RBP3.86□□□□□ -1.79
LRRC28-208ENST00000558771 EIF4EP06730 217 aaKnown RBP3.86□□□□□ -1.79
LRRC28-208ENST00000558771 TRAPPC2P0DI81 140 aa3.86□□□□□ -1.79
LRRC28-208ENST00000558771 TRAPPC2BP0DI82 140 aa3.86□□□□□ -1.79
LRRC28-208ENST00000558771 OR13C7P0DN81 318 aa3.86□□□□□ -1.79
LRRC28-208ENST00000558771 HIST1H1DP16402 221 aaKnown RBP3.86□□□□□ -1.79
LRRC28-208ENST00000558771 TALDO1P37837 337 aa3.86□□□□□ -1.79
LRRC28-208ENST00000558771 RELQ04864 619 aaPredicted RBP3.86□□□□□ -1.79
LRRC28-208ENST00000558771 KLF9Q13886 244 aaPredicted RBP3.86□□□□□ -1.79
LRRC28-208ENST00000558771 RNF212Q495C1 297 aa3.86□□□□□ -1.79
LRRC28-208ENST00000558771 ZNF367Q7RTV3 350 aa3.86□□□□□ -1.79
LRRC28-208ENST00000558771 OR10R2Q8NGX6 335 aa3.86□□□□□ -1.79
LRRC28-208ENST00000558771 DGCR14Q96DF8 476 aaKnown RBP3.86□□□□□ -1.79
LRRC28-208ENST00000558771 COMMD5Q9GZQ3 224 aa3.86□□□□□ -1.79
LRRC28-208ENST00000558771 VSIRQ9H7M9 311 aa3.86□□□□□ -1.79
LRRC28-208ENST00000558771 ELF5Q9UKW6 265 aaPredicted RBP3.86□□□□□ -1.79
LRRC28-208ENST00000558771 RAB22AQ9UL26 194 aa3.86□□□□□ -1.79
LRRC28-208ENST00000558771 F11RQ9Y624 299 aaKnown RBP3.86□□□□□ -1.79
LRRC28-208ENST00000558771 SRRM2Q9UQ35 2752 aaKnown RBP3.86□□□□□ -1.79
LRRC28-208ENST00000558771 TRAV2A0A0B4J234 112 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 IGHV3-66A0A0C4DH42 116 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 TEX50A0A1B0GTY4 177 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 EPM2AB3EWF7 344 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 HPRT1P00492 218 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 CD5P06127 495 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 CTXN2P0C2S0 81 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 INAFM2P0DMQ5 153 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 NQO2P16083 231 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 DTYMKP23919 212 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 GADD45AP24522 165 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 RASSF2P50749 326 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 TAS2R31P59538 309 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 POU2AF1Q16633 256 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 HES5Q5TA89 166 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 UBE2UQ5VVX9 321 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 THOC7Q6I9Y2 204 aaKnown RBP3.85□□□□□ -1.79
LRRC28-208ENST00000558771 LAIR2Q6ISS4 152 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 ZFP1Q6P2D0 407 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 ZNF773Q6PK81 442 aa3.85□□□□□ -1.79
LRRC28-208ENST00000558771 TMEM91Q6ZNR0 172 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms