RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 ATOH7Q8N100 152 aa12.74□□□□□ -0.37
AP4E1-202ENST00000558439 AGMATQ9BSE5 352 aa12.74□□□□□ -0.37
AP4E1-202ENST00000558439 P01737 135 aa12.74□□□□□ -0.37
AP4E1-202ENST00000558439 PFN1P07737 140 aaKnown RBP12.74□□□□□ -0.37
AP4E1-202ENST00000558439 PYYP10082 97 aa12.74□□□□□ -0.37
AP4E1-202ENST00000558439 TMEM144Q7Z5S9 345 aa12.74□□□□□ -0.37
AP4E1-202ENST00000558439 ODF3L1Q8IXM7 274 aa12.74□□□□□ -0.37
AP4E1-202ENST00000558439 IL36BQ9NZH7 164 aa12.74□□□□□ -0.37
AP4E1-202ENST00000558439 CHD3Q12873 2000 aaKnown RBP12.73□□□□□ -0.37
AP4E1-202ENST00000558439 HYPMO75409 117 aa12.73□□□□□ -0.37
AP4E1-202ENST00000558439 Q56UQ5 140 aa12.73□□□□□ -0.37
AP4E1-202ENST00000558439 CSN1S1P47710 185 aa12.73□□□□□ -0.37
AP4E1-202ENST00000558439 LINC01560Q8TB33 94 aa12.73□□□□□ -0.37
AP4E1-202ENST00000558439 AP1S3Q96PC3 154 aa12.73□□□□□ -0.37
AP4E1-202ENST00000558439 SPRY4Q9C004 299 aa12.73□□□□□ -0.37
AP4E1-202ENST00000558439 TMEM106BQ9NUM4 274 aa12.73□□□□□ -0.37
AP4E1-202ENST00000558439 YTHDF2Q9Y5A9 579 aaKnown RBP12.73□□□□□ -0.37
AP4E1-202ENST00000558439 S4R3C0 116 aa12.73□□□□□ -0.37
AP4E1-202ENST00000558439 C17orf100A8MU93 164 aa12.73□□□□□ -0.37
AP4E1-202ENST00000558439 ZNF25P17030 456 aaPredicted RBP12.73□□□□□ -0.37
AP4E1-202ENST00000558439 JOSD1Q15040 202 aaPredicted RBP12.73□□□□□ -0.37
AP4E1-202ENST00000558439 Q6ZN92 141 aa12.73□□□□□ -0.37
AP4E1-202ENST00000558439 RASL11BQ9BPW5 248 aa12.73□□□□□ -0.37
AP4E1-202ENST00000558439 TMSB15BA0A087X1C1 80 aa12.73□□□□□ -0.37
AP4E1-202ENST00000558439 SERF1AO75920 110 aa12.73□□□□□ -0.37
AP4E1-202ENST00000558439 IGLV2-14P01704 120 aa12.73□□□□□ -0.37
AP4E1-202ENST00000558439 EAF1Q96JC9 268 aaPredicted RBP12.73□□□□□ -0.37
AP4E1-202ENST00000558439 EYSQ5T1H1 3165 aa12.72□□□□□ -0.37
AP4E1-202ENST00000558439 LINC00305Q7Z4B0 112 aa12.72□□□□□ -0.37
AP4E1-202ENST00000558439 TLN1Q9Y490 2541 aaKnown RBP12.72□□□□□ -0.37
AP4E1-202ENST00000558439 SPRNQ5BIV9 151 aa12.72□□□□□ -0.37
AP4E1-202ENST00000558439 OR4F17Q8NGA8 305 aa12.72□□□□□ -0.37
AP4E1-202ENST00000558439 SCRT1Q9BWW7 348 aa12.72□□□□□ -0.37
AP4E1-202ENST00000558439 C11orf1Q9H5F2 150 aa12.72□□□□□ -0.37
AP4E1-202ENST00000558439 TEX50A0A1B0GTY4 177 aa12.72□□□□□ -0.37
AP4E1-202ENST00000558439 PAFAH1B2P68402 229 aa12.72□□□□□ -0.37
AP4E1-202ENST00000558439 PRNTQ86SH4 94 aa12.72□□□□□ -0.37
AP4E1-202ENST00000558439 FAM19A2Q8N3H0 131 aa12.72□□□□□ -0.37
AP4E1-202ENST00000558439 ZNF114Q8NC26 417 aa12.72□□□□□ -0.37
AP4E1-202ENST00000558439 OSR1Q8TAX0 266 aaPredicted RBP12.72□□□□□ -0.37
AP4E1-202ENST00000558439 NOTCH3Q9UM47 2321 aa12.72□□□□□ -0.37
AP4E1-202ENST00000558439 TNFSF13O75888 250 aa12.71□□□□□ -0.37
AP4E1-202ENST00000558439 HTR1DP28221 377 aa12.71□□□□□ -0.37
AP4E1-202ENST00000558439 S100A7AQ86SG5 101 aa12.71□□□□□ -0.37
AP4E1-202ENST00000558439 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.71□□□□□ -0.37
AP4E1-202ENST00000558439 RPUSD1Q9UJJ7 312 aaKnown RBP12.71□□□□□ -0.37
AP4E1-202ENST00000558439 PLXNB1O43157 2135 aa12.71□□□□□ -0.37
AP4E1-202ENST00000558439 HIST1H1EP10412 219 aaKnown RBP12.71□□□□□ -0.37
AP4E1-202ENST00000558439 ARF6P62330 175 aa12.71□□□□□ -0.37
AP4E1-202ENST00000558439 ARSJQ5FYB0 599 aaPredicted RBP12.71□□□□□ -0.37
AP4E1-202ENST00000558439 LEMD1Q68G75 181 aa12.71□□□□□ -0.37
AP4E1-202ENST00000558439 ANKHD1Q8IWZ3 2542 aaKnown RBP12.71□□□□□ -0.37
AP4E1-202ENST00000558439 MC5RP33032 325 aa12.71□□□□□ -0.38
AP4E1-202ENST00000558439 LINC00312Q9Y6C7 94 aa12.71□□□□□ -0.38
AP4E1-202ENST00000558439 PLA2G2CQ5R387 149 aa12.7□□□□□ -0.38
AP4E1-202ENST00000558439 KLHDC1Q8N7A1 406 aa12.7□□□□□ -0.38
AP4E1-202ENST00000558439 FAM57AQ8TBR7 257 aa12.7□□□□□ -0.38
AP4E1-202ENST00000558439 CEP295Q9C0D2 2601 aa12.7□□□□□ -0.38
AP4E1-202ENST00000558439 CPAMD8Q8IZJ3 1885 aa12.7□□□□□ -0.38
AP4E1-202ENST00000558439 MMP23AO75900 390 aa12.7□□□□□ -0.38
AP4E1-202ENST00000558439 FOXA3P55318 350 aaPredicted RBP12.7□□□□□ -0.38
AP4E1-202ENST00000558439 SELENOTP62341 195 aa12.7□□□□□ -0.38
AP4E1-202ENST00000558439 ASCL5Q7RTU5 278 aa12.7□□□□□ -0.38
AP4E1-202ENST00000558439 C15orf65H3BRN8 121 aa12.7□□□□□ -0.38
AP4E1-202ENST00000558439 GNG7O60262 68 aa12.7□□□□□ -0.38
AP4E1-202ENST00000558439 GNG5P63218 68 aa12.7□□□□□ -0.38
AP4E1-202ENST00000558439 DAZAP2Q15038 168 aaPredicted RBP12.7□□□□□ -0.38
AP4E1-202ENST00000558439 OR52E5Q8NH55 327 aa12.7□□□□□ -0.38
AP4E1-202ENST00000558439 DIRC2Q96SL1 478 aa12.7□□□□□ -0.38
AP4E1-202ENST00000558439 FBXL15Q9H469 300 aa12.7□□□□□ -0.38
AP4E1-202ENST00000558439 PRCDQ00LT1 54 aa12.7□□□□□ -0.38
AP4E1-202ENST00000558439 LINC00469Q8N7U9 141 aa12.7□□□□□ -0.38
AP4E1-202ENST00000558439 TMEM186Q96B77 213 aa12.7□□□□□ -0.38
AP4E1-202ENST00000558439 IGHV3-35A0A0C4DH35 117 aa12.69□□□□□ -0.38
AP4E1-202ENST00000558439 IGHV1-69-2A0A0G2JMI3 117 aa12.69□□□□□ -0.38
AP4E1-202ENST00000558439 TM4SF5O14894 197 aa12.69□□□□□ -0.38
AP4E1-202ENST00000558439 C5orf30Q96GV9 206 aa12.69□□□□□ -0.38
AP4E1-202ENST00000558439 PGLYRP4Q96LB8 373 aa12.69□□□□□ -0.38
AP4E1-202ENST00000558439 CCL21O00585 134 aa12.69□□□□□ -0.38
AP4E1-202ENST00000558439 GPX4P36969 197 aaPredicted RBP12.69□□□□□ -0.38
AP4E1-202ENST00000558439 STXBP6Q8NFX7 210 aa12.69□□□□□ -0.38
AP4E1-202ENST00000558439 MT-ND6P03923 174 aa12.69□□□□□ -0.38
AP4E1-202ENST00000558439 GPR6P46095 362 aaPredicted RBP12.69□□□□□ -0.38
AP4E1-202ENST00000558439 CD69Q07108 199 aa12.69□□□□□ -0.38
AP4E1-202ENST00000558439 ZNF295-AS1Q8N0V1 137 aa12.69□□□□□ -0.38
AP4E1-202ENST00000558439 WNT10AQ9GZT5 417 aa12.69□□□□□ -0.38
AP4E1-202ENST00000558439 HLA-DQA1P01909 254 aa12.68□□□□□ -0.38
AP4E1-202ENST00000558439 CD24P25063 80 aa12.68□□□□□ -0.38
AP4E1-202ENST00000558439 DLX1P56177 255 aa12.68□□□□□ -0.38
AP4E1-202ENST00000558439 OR8B3Q8NGG8 313 aa12.68□□□□□ -0.38
AP4E1-202ENST00000558439 OR8B2Q96RD0 313 aa12.68□□□□□ -0.38
AP4E1-202ENST00000558439 HIGD1AQ9Y241 93 aa12.68□□□□□ -0.38
AP4E1-202ENST00000558439 IGHV2-70P01814 119 aa12.68□□□□□ -0.38
AP4E1-202ENST00000558439 FAM87AP0C7U9 286 aa12.68□□□□□ -0.38
AP4E1-202ENST00000558439 COX19Q49B96 90 aa12.68□□□□□ -0.38
AP4E1-202ENST00000558439 LINC00479Q96M42 142 aa12.68□□□□□ -0.38
AP4E1-202ENST00000558439 PARD6GQ9BYG4 376 aaPredicted RBP12.68□□□□□ -0.38
AP4E1-202ENST00000558439 AAMDCQ9H7C9 122 aa12.68□□□□□ -0.38
AP4E1-202ENST00000558439 RALYQ9UKM9 306 aaKnown RBP12.68□□□□□ -0.38
AP4E1-202ENST00000558439 MBD3L4A6NDZ8 208 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms