RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 SLC24A4Q8NFF2 622 aa8.12□□□□□ -1.11
LRRC28-204ENST00000558172 RAB40CQ96S21 281 aa8.12□□□□□ -1.11
LRRC28-204ENST00000558172 ATP6V0BQ99437 205 aa8.12□□□□□ -1.11
LRRC28-204ENST00000558172 NMES1Q9C002 83 aa8.12□□□□□ -1.11
LRRC28-204ENST00000558172 MAGT1Q9H0U3 335 aa8.12□□□□□ -1.11
LRRC28-204ENST00000558172 MED28Q9H204 178 aa8.12□□□□□ -1.11
LRRC28-204ENST00000558172 GNB4Q9HAV0 340 aa8.12□□□□□ -1.11
LRRC28-204ENST00000558172 RANGRFQ9HD47 186 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-204ENST00000558172 MGAT4CQ9UBM8 478 aa8.12□□□□□ -1.11
LRRC28-204ENST00000558172 DMRT1Q9Y5R6 373 aa8.12□□□□□ -1.11
LRRC28-204ENST00000558172 IGHV3-11P01762 117 aa8.11□□□□□ -1.11
LRRC28-204ENST00000558172 MBPP02686 304 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-204ENST00000558172 HSPB1P04792 205 aaKnown RBP8.11□□□□□ -1.11
LRRC28-204ENST00000558172 IAPPP10997 89 aa8.11□□□□□ -1.11
LRRC28-204ENST00000558172 PVALBP20472 110 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-204ENST00000558172 MYCNOSP40205 109 aa8.11□□□□□ -1.11
LRRC28-204ENST00000558172 TAS2R30P59541 319 aa8.11□□□□□ -1.11
LRRC28-204ENST00000558172 POLR2GP62487 172 aaKnown RBP eCLIP8.11□□□□□ -1.11
LRRC28-204ENST00000558172 HIST2H2BDQ6DRA6 164 aa8.11□□□□□ -1.11
LRRC28-204ENST00000558172 C8orf86Q6ZUL3 223 aa8.11□□□□□ -1.11
LRRC28-204ENST00000558172 RNASEH2CQ8TDP1 164 aaKnown RBP8.11□□□□□ -1.11
LRRC28-204ENST00000558172 DPF1Q92782 380 aa8.11□□□□□ -1.11
LRRC28-204ENST00000558172 MISP3Q96FF7 219 aa8.11□□□□□ -1.11
LRRC28-204ENST00000558172 SMIM8Q96KF7 97 aa8.11□□□□□ -1.11
LRRC28-204ENST00000558172 GAR1Q9NY12 217 aaKnown RBP8.11□□□□□ -1.11
LRRC28-204ENST00000558172 PEF1Q9UBV8 284 aaKnown RBP8.11□□□□□ -1.11
LRRC28-204ENST00000558172 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.1□□□□□ -1.11
LRRC28-204ENST00000558172 RPS10-NUDT3A0A1W2PQS6 291 aa8.1□□□□□ -1.11
LRRC28-204ENST00000558172 I3L2K1 104 aa8.1□□□□□ -1.11
LRRC28-204ENST00000558172 L7N2F9 121 aa8.1□□□□□ -1.11
LRRC28-204ENST00000558172 TSC22D2O75157 780 aa8.1□□□□□ -1.11
LRRC28-204ENST00000558172 SIX6O95475 246 aa8.1□□□□□ -1.11
LRRC28-204ENST00000558172 RLN2P04090 185 aa8.1□□□□□ -1.11
LRRC28-204ENST00000558172 FCGR2BP31994 310 aaPredicted RBP8.1□□□□□ -1.11
LRRC28-204ENST00000558172 RRAS2P62070 204 aaPredicted RBP8.1□□□□□ -1.11
LRRC28-204ENST00000558172 VAMP2P63027 116 aa8.1□□□□□ -1.11
LRRC28-204ENST00000558172 ETFRF1Q6IPR1 90 aa8.1□□□□□ -1.11
LRRC28-204ENST00000558172 C18orf65Q6ZTR6 163 aa8.1□□□□□ -1.11
LRRC28-204ENST00000558172 OR11H1Q8NG94 326 aa8.1□□□□□ -1.11
LRRC28-204ENST00000558172 OR1N2Q8NGR9 330 aa8.1□□□□□ -1.11
LRRC28-204ENST00000558172 SCARB1Q8WTV0 552 aa8.1□□□□□ -1.11
LRRC28-204ENST00000558172 ASB13Q8WXK3 278 aa8.1□□□□□ -1.11
LRRC28-204ENST00000558172 PINX1Q96BK5 328 aaKnown RBP8.1□□□□□ -1.11
LRRC28-204ENST00000558172 OR5B12Q96R08 314 aa8.1□□□□□ -1.11
LRRC28-204ENST00000558172 TXN2Q99757 166 aa8.1□□□□□ -1.11
LRRC28-204ENST00000558172 C21orf62Q9NYP8 219 aa8.1□□□□□ -1.11
LRRC28-204ENST00000558172 PSENENQ9NZ42 101 aa8.1□□□□□ -1.11
LRRC28-204ENST00000558172 STRAPQ9Y3F4 350 aaKnown RBP8.1□□□□□ -1.11
LRRC28-204ENST00000558172 LSM5Q9Y4Y9 91 aaKnown RBP8.1□□□□□ -1.11
LRRC28-204ENST00000558172 LINC01619G3V211 115 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 K7EIM0 57 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 K7EPK0 472 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 CCL24O00175 119 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 SSSCA1O60232 199 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 MT-CO2P00403 227 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 PF4P02776 101 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 IFNA4P05014 189 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 OR8U8P0C7N1 319 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 OPRK1P41145 380 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 MFAP4P55083 255 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 H2BFSP57053 126 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 DEFA5Q01523 94 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 ZNF616Q08AN1 781 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 RAB32Q13637 225 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 FCN2Q15485 313 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 SPANXN5Q5MJ07 72 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 ZNF502Q8TBZ5 544 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 RAX2Q96IS3 184 aa8.09□□□□□ -1.11
LRRC28-204ENST00000558172 RCL1Q9Y2P8 373 aaKnown RBP8.09□□□□□ -1.11
LRRC28-204ENST00000558172 ANKRD34BA5PLL1 514 aa8.08□□□□□ -1.12
LRRC28-204ENST00000558172 MFSD2BA6NFX1 497 aa8.08□□□□□ -1.12
LRRC28-204ENST00000558172 C15orf62A8K5M9 175 aa8.08□□□□□ -1.12
LRRC28-204ENST00000558172 GGCTO75223 188 aaKnown RBP8.08□□□□□ -1.12
LRRC28-204ENST00000558172 SCAF4O95104 1147 aaKnown RBP8.08□□□□□ -1.12
LRRC28-204ENST00000558172 CLEC3BP05452 202 aa8.08□□□□□ -1.12
LRRC28-204ENST00000558172 PET100P0DJ07 73 aa8.08□□□□□ -1.12
LRRC28-204ENST00000558172 SLC25A4P12235 298 aa8.08□□□□□ -1.12
LRRC28-204ENST00000558172 CXCL3P19876 107 aa8.08□□□□□ -1.12
LRRC28-204ENST00000558172 ZP3P21754 424 aa8.08□□□□□ -1.12
LRRC28-204ENST00000558172 GPX4P36969 197 aaPredicted RBP8.08□□□□□ -1.12
LRRC28-204ENST00000558172 NPBWR1P48145 328 aa8.08□□□□□ -1.12
LRRC28-204ENST00000558172 PAX9P55771 341 aa8.08□□□□□ -1.12
LRRC28-204ENST00000558172 S100A10P60903 97 aa8.08□□□□□ -1.12
LRRC28-204ENST00000558172 FHL3Q13643 280 aa8.08□□□□□ -1.12
LRRC28-204ENST00000558172 CLEC19AQ6UXS0 136 aa8.08□□□□□ -1.12
LRRC28-204ENST00000558172 ETV3LQ6ZN32 361 aa8.08□□□□□ -1.12
LRRC28-204ENST00000558172 TMEM170AQ8WVE7 144 aa8.08□□□□□ -1.12
LRRC28-204ENST00000558172 CACNG8Q8WXS5 425 aa8.08□□□□□ -1.12
LRRC28-204ENST00000558172 ZNF436Q9C0F3 470 aaPredicted RBP8.08□□□□□ -1.12
LRRC28-204ENST00000558172 TRRAPQ9Y4A5 3859 aa8.08□□□□□ -1.12
LRRC28-204ENST00000558172 IGHV4OR15-8A0A075B7B6 117 aa8.07□□□□□ -1.12
LRRC28-204ENST00000558172 TRAV30A0A087WSZ9 112 aa8.07□□□□□ -1.12
LRRC28-204ENST00000558172 A0A087WW49 117 aa8.07□□□□□ -1.12
LRRC28-204ENST00000558172 IGHV3-21A0A0B4J1V1 117 aa8.07□□□□□ -1.12
LRRC28-204ENST00000558172 E5RGE8 158 aa8.07□□□□□ -1.12
LRRC28-204ENST00000558172 SCGB2A1O75556 95 aa8.07□□□□□ -1.12
LRRC28-204ENST00000558172 DEDDO75618 318 aa8.07□□□□□ -1.12
LRRC28-204ENST00000558172 TMEM50AO95807 157 aa8.07□□□□□ -1.12
LRRC28-204ENST00000558172 TSPAN15O95858 294 aa8.07□□□□□ -1.12
LRRC28-204ENST00000558172 IGHV3-23P01764 117 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms