RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 IFNGR2P38484 337 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 MAP2K4P45985 399 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 SUB1P53999 127 aaKnown RBP eCLIP3.83□□□□□ -1.8
RTF1-204ENST00000558117 DLX6P56179 175 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 TAS2R60P59551 318 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 TSPAN5P62079 268 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 RPL31P62899 125 aaKnown RBP3.83□□□□□ -1.8
RTF1-204ENST00000558117 PRKCDQ05655 676 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 TSPAN31Q12999 210 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 DYNC1I2Q13409 638 aaKnown RBP3.83□□□□□ -1.8
RTF1-204ENST00000558117 ASAH1Q13510 395 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 HES1Q14469 280 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 KRTAP13-3Q3SY46 172 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 C10orf128Q5T292 105 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 FAM27BQ5VT28 67 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 SMARCD3Q6STE5 483 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 IL34Q6ZMJ4 242 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 Q6ZN92 141 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 AHSA2Q719I0 299 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 ZNF767PQ75MW2 155 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 OAFQ86UD1 273 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 ENTHD1Q8IYW4 607 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 C6orf223Q8N319 242 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 OR4M1Q8NGD0 313 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 OR52L1Q8NGH7 329 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 OR13D1Q8NGV5 346 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 FANK1Q8TC84 345 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 LRRC29Q8WV35 223 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 GGTLC1Q9BX51 225 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 GABARAPL3Q9BY60 117 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 CCDC90BQ9GZT6 254 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 C20orf85Q9H1P6 137 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 C8orf4Q9NR00 106 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 KCNIP1Q9NZI2 227 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 DNAJC27Q9NZQ0 273 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 IER3IP1Q9Y5U9 82 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 V9GY05 133 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 TRAV36DV7A0A075B6V5 113 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 IGKV1D-43A0A0B4J1Z2 117 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 KIR2DL5BA0A0G2JN68 375 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 KIR2DL5BA0A0G2JPC4 375 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 FAM183AA6NL82 134 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 TMEM210A6NLX4 147 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 C17orf98A8MV24 154 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 C11orf94C9JXX5 98 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 H7C1C5 153 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 TNFAIP8O95379 198 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 BGLAPP02818 100 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 CST2P09228 141 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 MAS1LP35410 378 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 RBM34P42696 430 aaKnown RBP3.82□□□□□ -1.8
RTF1-204ENST00000558117 RANBP1P43487 201 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 FXYD6P3P58550 94 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 LCN6P62502 163 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 ESRRGP62508 458 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 PAFAH1B2P68402 229 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 MADCAM1Q13477 382 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 OR8G1Q15617 311 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 SGCAQ16586 387 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 DEFB135Q30KP9 77 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 RFX4Q33E94 735 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 ZBED5Q49AG3 693 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 SAPCD1Q5SSQ6 148 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 OTPQ5XKR4 325 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 LCN12Q6JVE5 192 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 RASSF6Q6ZTQ3 369 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 KIR2DL5AQ8N109 375 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 Q8N402 240 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 LINC00471Q8N535 108 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 OR10R2Q8NGX6 335 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 OR4K13Q8NH42 304 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 KIR2DL5BQ8NHK3 375 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 TEX47Q8TBZ9 253 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 APH1BQ8WW43 257 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 SLC7A6Q92536 515 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 RDH12Q96NR8 316 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 ERMAPQ96PL5 475 aaPredicted RBP3.82□□□□□ -1.8
RTF1-204ENST00000558117 APOL4Q9BPW4 351 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 COPS4Q9BT78 406 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 RSG1Q9BU20 258 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 OR52D1Q9H346 318 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 TXNIPQ9H3M7 391 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 RERGLQ9H628 205 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 PLSCR3Q9NRY6 295 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 RHBDL2Q9NX52 303 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 CALYQ9NYX4 217 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 PRO0461Q9UI25 63 aa3.82□□□□□ -1.8
RTF1-204ENST00000558117 TRAV8-7A0A075B6U6 113 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 LOC102724200A0A096LPH7 203 aaPredicted RBP3.81□□□□□ -1.8
RTF1-204ENST00000558117 ARRDC5A6NEK1 342 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 DHRS7CA6NNS2 312 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 F6UB75 175 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 NUPL2O15504 423 aaKnown RBP3.81□□□□□ -1.8
RTF1-204ENST00000558117 FGF16O43320 207 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 GATCO43716 136 aaKnown RBP3.81□□□□□ -1.8
RTF1-204ENST00000558117 RBBP9O75884 186 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 IFNA10P01566 189 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 GYPBP06028 91 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 MRPL3P09001 348 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms