RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 OR51H1Q8NH63 302 aa8.9□□□□□ -0.98
PSEN1-221ENST00000557293 RAB40CQ96S21 281 aa8.9□□□□□ -0.98
PSEN1-221ENST00000557293 ACOT13Q9NPJ3 140 aa8.9□□□□□ -0.98
PSEN1-221ENST00000557293 MARCH11A6NNE9 402 aa8.89□□□□□ -0.99
PSEN1-221ENST00000557293 PDCD5O14737 125 aa8.89□□□□□ -0.99
PSEN1-221ENST00000557293 LPAR6P43657 344 aa8.89□□□□□ -0.99
PSEN1-221ENST00000557293 MLLT11Q13015 90 aaPredicted RBP8.89□□□□□ -0.99
PSEN1-221ENST00000557293 CATR1Q13166 79 aa8.89□□□□□ -0.99
PSEN1-221ENST00000557293 ZNF367Q7RTV3 350 aa8.89□□□□□ -0.99
PSEN1-221ENST00000557293 MISP3Q96FF7 219 aa8.89□□□□□ -0.99
PSEN1-221ENST00000557293 GINS3Q9BRX5 216 aa8.89□□□□□ -0.99
PSEN1-221ENST00000557293 PUS1Q9Y606 427 aaKnown RBP eCLIP8.89□□□□□ -0.99
PSEN1-221ENST00000557293 GNG7O60262 68 aa8.88□□□□□ -0.99
PSEN1-221ENST00000557293 TMEM50AO95807 157 aa8.88□□□□□ -0.99
PSEN1-221ENST00000557293 KRASP01116 189 aa8.88□□□□□ -0.99
PSEN1-221ENST00000557293 EIF4EP06730 217 aaKnown RBP8.88□□□□□ -0.99
PSEN1-221ENST00000557293 SPART-AS1P0CW21 52 aa8.88□□□□□ -0.99
PSEN1-221ENST00000557293 GNRHRP30968 328 aa8.88□□□□□ -0.99
PSEN1-221ENST00000557293 RCN1Q15293 331 aa8.88□□□□□ -0.99
PSEN1-221ENST00000557293 ZNF705AQ6ZN79 300 aaPredicted RBP8.88□□□□□ -0.99
PSEN1-221ENST00000557293 BEST4Q8NFU0 473 aa8.88□□□□□ -0.99
PSEN1-221ENST00000557293 STXBP6Q8NFX7 210 aa8.88□□□□□ -0.99
PSEN1-221ENST00000557293 FCAMRQ8WWV6 532 aa8.88□□□□□ -0.99
PSEN1-221ENST00000557293 NEU1Q99519 415 aa8.88□□□□□ -0.99
PSEN1-221ENST00000557293 DUSP21Q9H596 190 aa8.88□□□□□ -0.99
PSEN1-221ENST00000557293 C8orf4Q9NR00 106 aa8.88□□□□□ -0.99
PSEN1-221ENST00000557293 XCL2Q9UBD3 114 aa8.88□□□□□ -0.99
PSEN1-221ENST00000557293 ZNF705FA8MVS1 300 aaPredicted RBP8.87□□□□□ -0.99
PSEN1-221ENST00000557293 ZNF705DP0CH99 300 aaPredicted RBP8.87□□□□□ -0.99
PSEN1-221ENST00000557293 ZNF705BP0CI00 300 aaPredicted RBP8.87□□□□□ -0.99
PSEN1-221ENST00000557293 RAB3BP20337 219 aa8.87□□□□□ -0.99
PSEN1-221ENST00000557293 F2RP25116 425 aa8.87□□□□□ -0.99
PSEN1-221ENST00000557293 CRYBB3P26998 211 aa8.87□□□□□ -0.99
PSEN1-221ENST00000557293 G6PCP35575 357 aa8.87□□□□□ -0.99
PSEN1-221ENST00000557293 FXYD4P59646 89 aa8.87□□□□□ -0.99
PSEN1-221ENST00000557293 GNG2P59768 71 aa8.87□□□□□ -0.99
PSEN1-221ENST00000557293 AADACL3Q5VUY0 350 aa8.87□□□□□ -0.99
PSEN1-221ENST00000557293 ZNF600Q6ZNG1 722 aa8.87□□□□□ -0.99
PSEN1-221ENST00000557293 HOGA1Q86XE5 327 aa8.87□□□□□ -0.99
PSEN1-221ENST00000557293 ZNF114Q8NC26 417 aa8.87□□□□□ -0.99
PSEN1-221ENST00000557293 TMEM56Q96MV1 263 aa8.87□□□□□ -0.99
PSEN1-221ENST00000557293 MGLLQ99685 303 aa8.87□□□□□ -0.99
PSEN1-221ENST00000557293 DMBT1Q9UGM3 2413 aaPredicted RBP8.86□□□□□ -0.99
PSEN1-221ENST00000557293 PGLYRP1O75594 196 aaPredicted RBP8.86□□□□□ -0.99
PSEN1-221ENST00000557293 NPPCP23582 126 aa8.86□□□□□ -0.99
PSEN1-221ENST00000557293 PPP5CP53041 499 aa8.86□□□□□ -0.99
PSEN1-221ENST00000557293 DKK2Q9UBU2 259 aa8.86□□□□□ -0.99
PSEN1-221ENST00000557293 PRNDQ9UKY0 176 aa8.86□□□□□ -0.99
PSEN1-221ENST00000557293 U3KQE9 123 aa8.86□□□□□ -0.99
PSEN1-221ENST00000557293 NBDYA0A0U1RRE5 68 aa8.85□□□□□ -0.99
PSEN1-221ENST00000557293 SMIM30A4D0T7 59 aa8.85□□□□□ -0.99
PSEN1-221ENST00000557293 H3BMM0 161 aa8.85□□□□□ -0.99
PSEN1-221ENST00000557293 SNAPC5O75971 98 aa8.85□□□□□ -0.99
PSEN1-221ENST00000557293 P2RY1P47900 373 aa8.85□□□□□ -0.99
PSEN1-221ENST00000557293 EMP1P54849 157 aa8.85□□□□□ -0.99
PSEN1-221ENST00000557293 ARPC4P59998 168 aa8.85□□□□□ -0.99
PSEN1-221ENST00000557293 ERVK-16P61578 105 aa8.85□□□□□ -0.99
PSEN1-221ENST00000557293 C6orf223Q8N319 242 aa8.85□□□□□ -0.99
PSEN1-221ENST00000557293 ZNRF2Q8NHG8 242 aa8.85□□□□□ -0.99
PSEN1-221ENST00000557293 PINX1Q96BK5 328 aaKnown RBP8.85□□□□□ -0.99
PSEN1-221ENST00000557293 MOB3AQ96BX8 217 aa8.85□□□□□ -0.99
PSEN1-221ENST00000557293 YTHDF1Q9BYJ9 559 aaKnown RBP8.85□□□□□ -0.99
PSEN1-221ENST00000557293 SCN3BQ9NY72 215 aa8.85□□□□□ -0.99
PSEN1-221ENST00000557293 MRPL36Q9P0J6 103 aaKnown RBP8.85□□□□□ -0.99
PSEN1-221ENST00000557293 TRDV1A0A1B0GX56 115 aa8.84□□□□□ -0.99
PSEN1-221ENST00000557293 A0A1W2PS18 150 aa8.84□□□□□ -0.99
PSEN1-221ENST00000557293 CASQ2O14958 399 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-221ENST00000557293 RLN1P04808 185 aa8.84□□□□□ -0.99
PSEN1-221ENST00000557293 FCER2P06734 321 aa8.84□□□□□ -0.99
PSEN1-221ENST00000557293 NPBWR1P48145 328 aa8.84□□□□□ -0.99
PSEN1-221ENST00000557293 FAM3BP58499 235 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-221ENST00000557293 KRTAP10-2P60368 255 aa8.84□□□□□ -0.99
PSEN1-221ENST00000557293 OXA1LQ15070 435 aa8.84□□□□□ -0.99
PSEN1-221ENST00000557293 MLANAQ16655 118 aa8.84□□□□□ -0.99
PSEN1-221ENST00000557293 PSMG4Q5JS54 123 aa8.84□□□□□ -0.99
PSEN1-221ENST00000557293 OGFRL1Q5TC84 451 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-221ENST00000557293 FAM222AQ5U5X8 452 aa8.84□□□□□ -0.99
PSEN1-221ENST00000557293 TMEM88Q6PEY1 159 aa8.84□□□□□ -0.99
PSEN1-221ENST00000557293 SPATA12Q7Z6I5 190 aa8.84□□□□□ -0.99
PSEN1-221ENST00000557293 TMEM17Q86X19 198 aa8.84□□□□□ -0.99
PSEN1-221ENST00000557293 NIPSNAP3BQ9BS92 247 aa8.84□□□□□ -0.99
PSEN1-221ENST00000557293 C1QTNF4Q9BXJ3 329 aa8.84□□□□□ -0.99
PSEN1-221ENST00000557293 TMEM231Q9H6L2 316 aa8.84□□□□□ -0.99
PSEN1-221ENST00000557293 FKBP11Q9NYL4 201 aa8.84□□□□□ -0.99
PSEN1-221ENST00000557293 TMEM189A5PLL7 270 aa8.83□□□□□ -1
PSEN1-221ENST00000557293 SMIM9A6NGZ8 99 aa8.83□□□□□ -1
PSEN1-221ENST00000557293 IGKV1-39P01597 117 aa8.83□□□□□ -1
PSEN1-221ENST00000557293 IGKV1D-39P04432 117 aa8.83□□□□□ -1
PSEN1-221ENST00000557293 INAFM2P0DMQ5 153 aa8.83□□□□□ -1
PSEN1-221ENST00000557293 FGF9P31371 208 aaPredicted RBP8.83□□□□□ -1
PSEN1-221ENST00000557293 DHRS2Q13268 280 aa8.83□□□□□ -1
PSEN1-221ENST00000557293 DHRS11Q6UWP2 260 aa8.83□□□□□ -1
PSEN1-221ENST00000557293 SEC22AQ96IW7 307 aa8.83□□□□□ -1
PSEN1-221ENST00000557293 RNF167Q9H6Y7 350 aa8.83□□□□□ -1
PSEN1-221ENST00000557293 TRAV18A0A075B6X5 111 aa8.82□□□□□ -1
PSEN1-221ENST00000557293 RGS10O43665 173 aa8.82□□□□□ -1
PSEN1-221ENST00000557293 HTN3P15516 51 aa8.82□□□□□ -1
PSEN1-221ENST00000557293 HSPE1P61604 102 aaKnown RBP8.82□□□□□ -1
PSEN1-221ENST00000557293 PRCDQ00LT1 54 aa8.82□□□□□ -1
PSEN1-221ENST00000557293 C16orf54Q6UWD8 224 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms