RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 LEMD1Q68G75 181 aa12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 OCC1Q8TAD7 63 aa12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 SSBP3Q9BWW4 388 aaPredicted RBP12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 GSX1Q9H4S2 264 aaPredicted RBP12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 SLC45A2Q9UMX9 530 aa12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 ZNF835Q9Y2P0 537 aa12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 LINC00312Q9Y6C7 94 aa12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 PMS2P5A8MQ11 134 aa12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 FCN1O00602 326 aa12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 LGALS4P56470 323 aa12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 SSX2Q16385 188 aa12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 PRSS8Q16651 343 aa12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 NCBP2LA6PVI3 153 aaKnown RBP12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 UPK2O00526 184 aa12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 CEACAM4O75871 244 aa12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 PYYP10082 97 aa12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 PYY3Q5JQD4 70 aa12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 TPPP3Q9BW30 176 aa12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 FKBP11Q9NYL4 201 aa12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 YTHDF2Q9Y5A9 579 aaKnown RBP12.53□□□□□ -0.4
TMEM55B-207ENST00000557041 E7EQL1 145 aa12.52□□□□□ -0.4
TMEM55B-207ENST00000557041 CD33P20138 364 aa12.52□□□□□ -0.4
TMEM55B-207ENST00000557041 NPPCP23582 126 aa12.52□□□□□ -0.4
TMEM55B-207ENST00000557041 IL3RAP26951 378 aa12.52□□□□□ -0.4
TMEM55B-207ENST00000557041 VDAC2P45880 294 aaPredicted RBP12.52□□□□□ -0.4
TMEM55B-207ENST00000557041 OR8I2Q8N0Y5 310 aa12.52□□□□□ -0.4
TMEM55B-207ENST00000557041 OR4C13Q8NGP0 309 aa12.52□□□□□ -0.4
TMEM55B-207ENST00000557041 TPSG1Q9NRR2 321 aa12.52□□□□□ -0.4
TMEM55B-207ENST00000557041 TECRQ9NZ01 308 aaKnown RBP12.52□□□□□ -0.4
TMEM55B-207ENST00000557041 TMEM178BH3BS89 294 aa12.52□□□□□ -0.41
TMEM55B-207ENST00000557041 GAMTQ14353 236 aa12.52□□□□□ -0.41
TMEM55B-207ENST00000557041 IGHV3-35A0A0C4DH35 117 aa12.52□□□□□ -0.41
TMEM55B-207ENST00000557041 CA1P00915 261 aaPredicted RBP12.52□□□□□ -0.41
TMEM55B-207ENST00000557041 KDF1Q8NAX2 398 aaPredicted RBP12.52□□□□□ -0.41
TMEM55B-207ENST00000557041 SFRP2Q96HF1 295 aa12.52□□□□□ -0.41
TMEM55B-207ENST00000557041 LINC00479Q96M42 142 aa12.52□□□□□ -0.41
TMEM55B-207ENST00000557041 FBXL15Q9H469 300 aa12.52□□□□□ -0.41
TMEM55B-207ENST00000557041 NAT8BQ9UHF3 227 aa12.52□□□□□ -0.41
TMEM55B-207ENST00000557041 KMT2EQ8IZD2 1858 aa12.51□□□□□ -0.41
TMEM55B-207ENST00000557041 RBFOX2O43251 390 aaKnown RBP eCLIP12.51□□□□□ -0.41
TMEM55B-207ENST00000557041 LYZP61626 148 aa12.51□□□□□ -0.41
TMEM55B-207ENST00000557041 RNASE7Q9H1E1 156 aaKnown RBP12.51□□□□□ -0.41
TMEM55B-207ENST00000557041 POLQO75417 2590 aa12.51□□□□□ -0.41
TMEM55B-207ENST00000557041 LHBP01229 141 aa12.51□□□□□ -0.41
TMEM55B-207ENST00000557041 NTF3P20783 257 aa12.51□□□□□ -0.41
TMEM55B-207ENST00000557041 CAMPP49913 170 aa12.51□□□□□ -0.41
TMEM55B-207ENST00000557041 MMDQ15546 238 aa12.51□□□□□ -0.41
TMEM55B-207ENST00000557041 LINC01551Q86U37 167 aa12.51□□□□□ -0.41
TMEM55B-207ENST00000557041 ANAPC16Q96DE5 110 aa12.51□□□□□ -0.41
TMEM55B-207ENST00000557041 THBDP07204 575 aa12.5□□□□□ -0.41
TMEM55B-207ENST00000557041 PNKDQ8N490 385 aa12.5□□□□□ -0.41
TMEM55B-207ENST00000557041 ZNF430Q9H8G1 570 aaPredicted RBP12.5□□□□□ -0.41
TMEM55B-207ENST00000557041 ZNF355PQ9NSJ1 428 aa12.5□□□□□ -0.41
TMEM55B-207ENST00000557041 PITPNC1Q9UKF7 332 aa12.5□□□□□ -0.41
TMEM55B-207ENST00000557041 SETD2Q9BYW2 2564 aaPredicted RBP12.5□□□□□ -0.41
TMEM55B-207ENST00000557041 SPENQ96T58 3664 aaKnown RBP12.5□□□□□ -0.41
TMEM55B-207ENST00000557041 TSTD3H0UI37 97 aa12.5□□□□□ -0.41
TMEM55B-207ENST00000557041 CNTFRP26992 372 aa12.5□□□□□ -0.41
TMEM55B-207ENST00000557041 WASHC3Q9Y3C0 194 aa12.5□□□□□ -0.41
TMEM55B-207ENST00000557041 SNURFLB1AK76 121 aa12.5□□□□□ -0.41
TMEM55B-207ENST00000557041 NUBP1P53384 320 aa12.5□□□□□ -0.41
TMEM55B-207ENST00000557041 UBE2G1P62253 170 aa12.5□□□□□ -0.41
TMEM55B-207ENST00000557041 CENPWQ5EE01 88 aa12.5□□□□□ -0.41
TMEM55B-207ENST00000557041 SLC25A48Q6ZT89 311 aaKnown RBP12.5□□□□□ -0.41
TMEM55B-207ENST00000557041 IGHV3OR16-8A0A075B7F1 116 aa12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 PPIAL4CA0A0B4J2A2 164 aa12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 SLC25A5P05141 298 aaKnown RBP12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 PPIAL4GP0DN37 164 aa12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 C10orf113Q5VZT2 155 aa12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 TMEM170AQ8WVE7 144 aa12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 SRD5A3Q9H8P0 318 aa12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 E7EUB6 86 aa12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 IGHV2-5P01817 119 aa12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 STAG3L2P0CL84 134 aa12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 STAG3L3P0CL85 134 aa12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 CFHR2P36980 270 aa12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 LY6DQ14210 128 aa12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 BATFQ16520 125 aa12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 VSTM2AQ8TAG5 236 aa12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 PTPN13Q12923 2485 aa12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 P0C879 139 aa12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 ELOVL5Q9NYP7 299 aa12.49□□□□□ -0.41
TMEM55B-207ENST00000557041 APOBEC3AP31941 199 aaPredicted RBP12.48□□□□□ -0.41
TMEM55B-207ENST00000557041 PRCDQ00LT1 54 aa12.48□□□□□ -0.41
TMEM55B-207ENST00000557041 FAM169BQ8N8A8 192 aa12.48□□□□□ -0.41
TMEM55B-207ENST00000557041 Q8NA96 180 aa12.48□□□□□ -0.41
TMEM55B-207ENST00000557041 OR1P1Q8NH06 330 aa12.48□□□□□ -0.41
TMEM55B-207ENST00000557041 CTSZQ9UBR2 303 aa12.48□□□□□ -0.41
TMEM55B-207ENST00000557041 RPL27AP46776 148 aaKnown RBP12.48□□□□□ -0.41
TMEM55B-207ENST00000557041 RPL19P84098 196 aaKnown RBP12.48□□□□□ -0.41
TMEM55B-207ENST00000557041 TMEM18Q96B42 140 aa12.48□□□□□ -0.41
TMEM55B-207ENST00000557041 TMEM14BQ9NUH8 114 aa12.48□□□□□ -0.41
TMEM55B-207ENST00000557041 HLA-DRB5Q30154 266 aa12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 OR1L6Q8NGR2 347 aa12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 RITA1Q96K30 269 aa12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 DNAJC4Q9NNZ3 241 aa12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 FOXA2Q9Y261 457 aaPredicted RBP12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 H0YJW9 148 aa12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 PMCHP20382 165 aa12.47□□□□□ -0.41
TMEM55B-207ENST00000557041 PRRX1P54821 245 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms