RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 CSN3P07498 182 aa8.15□□□□□ -1.1
LINC00239-201ENST00000556973 HOXA1P49639 335 aaPredicted RBP8.15□□□□□ -1.1
LINC00239-201ENST00000556973 SMCO1Q147U7 214 aa8.15□□□□□ -1.1
LINC00239-201ENST00000556973 NMSQ5H8A3 153 aa8.15□□□□□ -1.1
LINC00239-201ENST00000556973 DEFB121Q5J5C9 76 aa8.15□□□□□ -1.1
LINC00239-201ENST00000556973 SPSB3Q6PJ21 355 aa8.15□□□□□ -1.1
LINC00239-201ENST00000556973 BSCL2Q96G97 398 aaPredicted RBP8.15□□□□□ -1.1
LINC00239-201ENST00000556973 TXN2Q99757 166 aa8.15□□□□□ -1.1
LINC00239-201ENST00000556973 GAR1Q9NY12 217 aaKnown RBP8.15□□□□□ -1.1
LINC00239-201ENST00000556973 C21orf62Q9NYP8 219 aa8.15□□□□□ -1.1
LINC00239-201ENST00000556973 ZNF256Q9Y2P7 627 aaPredicted RBP8.15□□□□□ -1.1
LINC00239-201ENST00000556973 A0A1B0GU03 582 aa8.14□□□□□ -1.11
LINC00239-201ENST00000556973 ZNF320A2RRD8 509 aa8.14□□□□□ -1.11
LINC00239-201ENST00000556973 OR2T8A6NH00 312 aa8.14□□□□□ -1.11
LINC00239-201ENST00000556973 LYRM1O43325 122 aa8.14□□□□□ -1.11
LINC00239-201ENST00000556973 SLC25A6P12236 298 aa8.14□□□□□ -1.11
LINC00239-201ENST00000556973 GPR183P32249 361 aa8.14□□□□□ -1.11
LINC00239-201ENST00000556973 BTCP35070 178 aa8.14□□□□□ -1.11
LINC00239-201ENST00000556973 HTR2BP41595 481 aa8.14□□□□□ -1.11
LINC00239-201ENST00000556973 MFAP4P55083 255 aa8.14□□□□□ -1.11
LINC00239-201ENST00000556973 PPP1R1AQ13522 171 aa8.14□□□□□ -1.11
LINC00239-201ENST00000556973 DCTN2Q13561 401 aaKnown RBP8.14□□□□□ -1.11
LINC00239-201ENST00000556973 ANKRD55Q3KP44 614 aa8.14□□□□□ -1.11
LINC00239-201ENST00000556973 PVRIGQ6DKI7 326 aa8.14□□□□□ -1.11
LINC00239-201ENST00000556973 PINX1Q96BK5 328 aaKnown RBP8.14□□□□□ -1.11
LINC00239-201ENST00000556973 HIPK2Q9H2X6 1198 aa8.14□□□□□ -1.11
LINC00239-201ENST00000556973 HEYLQ9NQ87 328 aaPredicted RBP8.14□□□□□ -1.11
LINC00239-201ENST00000556973 IGHV3-21A0A0B4J1V1 117 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 C9orf170A2RU37 121 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 CEBPZOSA8MTT3 80 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 TGOLN2O43493 480 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 LY86O95711 162 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 MT-CO2P00403 227 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 OR4E1P0C645 316 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 RNASE2P10153 161 aaKnown RBP8.13□□□□□ -1.11
LINC00239-201ENST00000556973 GP9P14770 177 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 SPNP16150 400 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 FCGR2BP31994 310 aaPredicted RBP8.13□□□□□ -1.11
LINC00239-201ENST00000556973 ZNF846Q147U1 533 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 BSXQ3C1V8 233 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 Q56UQ5 140 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 UBAC2Q8NBM4 344 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 PRR25Q96S07 402 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 ZNF436Q9C0F3 470 aaPredicted RBP8.13□□□□□ -1.11
LINC00239-201ENST00000556973 WDR12Q9GZL7 423 aaKnown RBP8.13□□□□□ -1.11
LINC00239-201ENST00000556973 PALMDQ9NP74 551 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 ZC4H2Q9NQZ6 224 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 HSPB7Q9UBY9 170 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 FLVCR2Q9UPI3 526 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 TMED3Q9Y3Q3 217 aa8.13□□□□□ -1.11
LINC00239-201ENST00000556973 C2orf70A6NJV1 201 aa8.12□□□□□ -1.11
LINC00239-201ENST00000556973 F8W735 103 aaPredicted RBP8.12□□□□□ -1.11
LINC00239-201ENST00000556973 NUPL2O15504 423 aaKnown RBP8.12□□□□□ -1.11
LINC00239-201ENST00000556973 TCRBP04435 133 aa8.12□□□□□ -1.11
LINC00239-201ENST00000556973 CTSGP08311 255 aa8.12□□□□□ -1.11
LINC00239-201ENST00000556973 FOLR2P14207 255 aa8.12□□□□□ -1.11
LINC00239-201ENST00000556973 CBLN1P23435 193 aa8.12□□□□□ -1.11
LINC00239-201ENST00000556973 ELLP55199 621 aaPredicted RBP8.12□□□□□ -1.11
LINC00239-201ENST00000556973 TNFRSF9Q07011 255 aa8.12□□□□□ -1.11
LINC00239-201ENST00000556973 C2orf83Q53S99 150 aa8.12□□□□□ -1.11
LINC00239-201ENST00000556973 NOXA1Q86UR1 476 aa8.12□□□□□ -1.11
LINC00239-201ENST00000556973 DUSP18Q8NEJ0 188 aa8.12□□□□□ -1.11
LINC00239-201ENST00000556973 OR2K2Q8NGT1 345 aa8.12□□□□□ -1.11
LINC00239-201ENST00000556973 OR1S1Q8NH92 325 aa8.12□□□□□ -1.11
LINC00239-201ENST00000556973 COQ8AQ8NI60 647 aa8.12□□□□□ -1.11
LINC00239-201ENST00000556973 TECRQ9NZ01 308 aaKnown RBP8.12□□□□□ -1.11
LINC00239-201ENST00000556973 UFC1Q9Y3C8 167 aa8.12□□□□□ -1.11
LINC00239-201ENST00000556973 LSM4Q9Y4Z0 139 aaKnown RBP8.12□□□□□ -1.11
LINC00239-201ENST00000556973 NOTCH1P46531 2555 aa8.12□□□□□ -1.11
LINC00239-201ENST00000556973 IGHV3-35A0A0C4DH35 117 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 A8MWP6 167 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 NDUFA4O00483 81 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 GNG7O60262 68 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 PITX3O75364 302 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 NXPH3O95157 252 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 HOXB5P09067 269 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 ANXA7P20073 488 aaKnown RBP8.11□□□□□ -1.11
LINC00239-201ENST00000556973 NPBWR1P48145 328 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 ATP5IP56385 69 aaPredicted RBP8.11□□□□□ -1.11
LINC00239-201ENST00000556973 RELQ04864 619 aaPredicted RBP8.11□□□□□ -1.11
LINC00239-201ENST00000556973 DHRS2Q13268 280 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 DEFB114Q30KQ6 69 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 C4orf46Q504U0 113 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 MZT2BQ6NZ67 158 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 ADAMTSL5Q6ZMM2 481 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 LYG2Q86SG7 212 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 HAPLN4Q86UW8 402 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 SLC24A4Q8NFF2 622 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 RNASEH2CQ8TDP1 164 aaKnown RBP8.11□□□□□ -1.11
LINC00239-201ENST00000556973 DTD1Q8TEA8 209 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 MARC2Q969Z3 335 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 CHRDL1Q9BU40 450 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 MRPL27Q9P0M9 148 aaKnown RBP8.11□□□□□ -1.11
LINC00239-201ENST00000556973 U3KQ87 197 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 NOTCH3Q9UM47 2321 aa8.11□□□□□ -1.11
LINC00239-201ENST00000556973 FAM240BA0A1B0GVZ2 78 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 RPS10-NUDT3A0A1W2PQS6 291 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 FAM90A26D6RGX4 464 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 K7EMT4 169 aa8.1□□□□□ -1.11
LINC00239-201ENST00000556973 MED6O75586 246 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms