RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 HRH1P35367 487 aa13.37□□□□□ -0.27
VIPAS39-209ENST00000556909 TGFBR1P36897 503 aa13.37□□□□□ -0.27
VIPAS39-209ENST00000556909 PAFAH1B2P68402 229 aa13.37□□□□□ -0.27
VIPAS39-209ENST00000556909 PRCDQ00LT1 54 aa13.37□□□□□ -0.27
VIPAS39-209ENST00000556909 NEDD8Q15843 81 aa13.37□□□□□ -0.27
VIPAS39-209ENST00000556909 ST8SIA2Q92186 375 aa13.37□□□□□ -0.27
VIPAS39-209ENST00000556909 PINX1Q96BK5 328 aaKnown RBP13.37□□□□□ -0.27
VIPAS39-209ENST00000556909 SEC22AQ96IW7 307 aa13.37□□□□□ -0.27
VIPAS39-209ENST00000556909 GINS3Q9BRX5 216 aa13.37□□□□□ -0.27
VIPAS39-209ENST00000556909 Q9H521 79 aa13.37□□□□□ -0.27
VIPAS39-209ENST00000556909 FAM212BQ9NTI7 297 aaPredicted RBP13.37□□□□□ -0.27
VIPAS39-209ENST00000556909 IGKV1-39P01597 117 aa13.36□□□□□ -0.27
VIPAS39-209ENST00000556909 IGKV1D-39P04432 117 aa13.36□□□□□ -0.27
VIPAS39-209ENST00000556909 LEMD1Q68G75 181 aa13.36□□□□□ -0.27
VIPAS39-209ENST00000556909 TOMM20LQ6UXN7 152 aa13.36□□□□□ -0.27
VIPAS39-209ENST00000556909 TBC1D26Q86UD7 250 aa13.36□□□□□ -0.27
VIPAS39-209ENST00000556909 OR4A16Q8NH70 328 aa13.36□□□□□ -0.27
VIPAS39-209ENST00000556909 C2CD4CQ8TF44 421 aa13.36□□□□□ -0.27
VIPAS39-209ENST00000556909 VSIRQ9H7M9 311 aa13.36□□□□□ -0.27
VIPAS39-209ENST00000556909 KIAA1109Q2LD37 5005 aa13.36□□□□□ -0.27
VIPAS39-209ENST00000556909 APOHP02749 345 aaPredicted RBP13.35□□□□□ -0.27
VIPAS39-209ENST00000556909 CD5P06127 495 aa13.35□□□□□ -0.27
VIPAS39-209ENST00000556909 EIF4EP06730 217 aaKnown RBP13.35□□□□□ -0.27
VIPAS39-209ENST00000556909 HLA-DMAP28067 261 aa13.35□□□□□ -0.27
VIPAS39-209ENST00000556909 TMEM187Q14656 261 aa13.35□□□□□ -0.27
VIPAS39-209ENST00000556909 H2BFWTQ7Z2G1 175 aa13.35□□□□□ -0.27
VIPAS39-209ENST00000556909 LYSMD2Q8IV50 215 aa13.35□□□□□ -0.27
VIPAS39-209ENST00000556909 CROCCP3Q8IVE0 287 aa13.35□□□□□ -0.27
VIPAS39-209ENST00000556909 LILRB2Q8N423 598 aa13.35□□□□□ -0.27
VIPAS39-209ENST00000556909 SAMD12Q8N8I0 201 aa13.35□□□□□ -0.27
VIPAS39-209ENST00000556909 MRGPRFQ96AM1 343 aa13.35□□□□□ -0.27
VIPAS39-209ENST00000556909 MS4A6AQ9H2W1 248 aa13.35□□□□□ -0.27
VIPAS39-209ENST00000556909 ZFAND3Q9H8U3 227 aa13.35□□□□□ -0.27
VIPAS39-209ENST00000556909 ST8SIA3O43173 380 aa13.34□□□□□ -0.27
VIPAS39-209ENST00000556909 DFFBO76075 338 aa13.34□□□□□ -0.27
VIPAS39-209ENST00000556909 S100GP29377 79 aa13.34□□□□□ -0.27
VIPAS39-209ENST00000556909 PRSS3P35030 304 aa13.34□□□□□ -0.27
VIPAS39-209ENST00000556909 TCTAP57738 103 aa13.34□□□□□ -0.27
VIPAS39-209ENST00000556909 DEFB131AP59861 70 aa13.34□□□□□ -0.27
VIPAS39-209ENST00000556909 FAM24BQ8N5W8 94 aa13.34□□□□□ -0.27
VIPAS39-209ENST00000556909 FAT2Q9NYQ8 4349 aa13.33□□□□□ -0.27
VIPAS39-209ENST00000556909 TRAV2A0A0B4J234 112 aa13.33□□□□□ -0.28
VIPAS39-209ENST00000556909 IGHV3-66A0A0C4DH42 116 aa13.33□□□□□ -0.28
VIPAS39-209ENST00000556909 HSPE1P61604 102 aaKnown RBP13.33□□□□□ -0.28
VIPAS39-209ENST00000556909 LPCAT3Q6P1A2 487 aa13.33□□□□□ -0.28
VIPAS39-209ENST00000556909 Q8NAQ8 132 aa13.33□□□□□ -0.28
VIPAS39-209ENST00000556909 PUS1Q9Y606 427 aaKnown RBP eCLIP13.33□□□□□ -0.28
VIPAS39-209ENST00000556909 DNASE2O00115 360 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-209ENST00000556909 ATP6V1G2O95670 118 aa13.32□□□□□ -0.28
VIPAS39-209ENST00000556909 RPS19P39019 145 aaKnown RBP13.32□□□□□ -0.28
VIPAS39-209ENST00000556909 TSPAN5P62079 268 aa13.32□□□□□ -0.28
VIPAS39-209ENST00000556909 ERHP84090 104 aaKnown RBP13.32□□□□□ -0.28
VIPAS39-209ENST00000556909 SPINK9Q5DT21 86 aa13.32□□□□□ -0.28
VIPAS39-209ENST00000556909 ZNF600Q6ZNG1 722 aa13.32□□□□□ -0.28
VIPAS39-209ENST00000556909 GPX8Q8TED1 209 aa13.32□□□□□ -0.28
VIPAS39-209ENST00000556909 APLNQ9ULZ1 77 aa13.32□□□□□ -0.28
VIPAS39-209ENST00000556909 PCLOQ9Y6V0 5065 aa13.32□□□□□ -0.28
VIPAS39-209ENST00000556909 DNAH2Q9P225 4427 aa13.31□□□□□ -0.28
VIPAS39-209ENST00000556909 A0A1B0GU03 582 aa13.31□□□□□ -0.28
VIPAS39-209ENST00000556909 IGLL5B9A064 214 aa13.31□□□□□ -0.28
VIPAS39-209ENST00000556909 NPBWR1P48145 328 aa13.31□□□□□ -0.28
VIPAS39-209ENST00000556909 RPL11P62913 178 aaKnown RBP13.31□□□□□ -0.28
VIPAS39-209ENST00000556909 IZUMO4Q1ZYL8 232 aa13.31□□□□□ -0.28
VIPAS39-209ENST00000556909 STHQ8IWL8 128 aa13.31□□□□□ -0.28
VIPAS39-209ENST00000556909 DUSP18Q8NEJ0 188 aa13.31□□□□□ -0.28
VIPAS39-209ENST00000556909 HRH4Q9H3N8 390 aa13.31□□□□□ -0.28
VIPAS39-209ENST00000556909 C11orf94C9JXX5 98 aa13.3□□□□□ -0.28
VIPAS39-209ENST00000556909 GIG44P09565 113 aaPredicted RBP13.3□□□□□ -0.28
VIPAS39-209ENST00000556909 UCP3P55916 312 aa13.3□□□□□ -0.28
VIPAS39-209ENST00000556909 TMEM231Q9H6L2 316 aa13.3□□□□□ -0.28
VIPAS39-209ENST00000556909 RABAC1Q9UI14 185 aa13.3□□□□□ -0.28
VIPAS39-209ENST00000556909 IGHV4-28A0A0C4DH34 117 aa13.29□□□□□ -0.28
VIPAS39-209ENST00000556909 RBMY1A1P0DJD3 496 aaKnown RBP13.29□□□□□ -0.28
VIPAS39-209ENST00000556909 RBMY1CP0DJD4 496 aa13.29□□□□□ -0.28
VIPAS39-209ENST00000556909 LSM3P62310 102 aaKnown RBP13.29□□□□□ -0.28
VIPAS39-209ENST00000556909 RBMY1FQ15415 496 aaKnown RBP13.29□□□□□ -0.28
VIPAS39-209ENST00000556909 KCTD21Q4G0X4 260 aa13.29□□□□□ -0.28
VIPAS39-209ENST00000556909 TRPT1Q86TN4 253 aaKnown RBP13.29□□□□□ -0.28
VIPAS39-209ENST00000556909 DNAH17Q9UFH2 4485 aa13.29□□□□□ -0.28
VIPAS39-209ENST00000556909 PKHD1P08F94 4074 aa13.29□□□□□ -0.28
VIPAS39-209ENST00000556909 INS-IGF2F8WCM5 200 aa13.28□□□□□ -0.28
VIPAS39-209ENST00000556909 TMEM50AO95807 157 aa13.28□□□□□ -0.28
VIPAS39-209ENST00000556909 IGKV1-5P01602 117 aa13.28□□□□□ -0.28
VIPAS39-209ENST00000556909 C4BPBP20851 252 aa13.28□□□□□ -0.28
VIPAS39-209ENST00000556909 SNCAP37840 140 aa13.28□□□□□ -0.28
VIPAS39-209ENST00000556909 PVRIGQ6DKI7 326 aa13.28□□□□□ -0.28
VIPAS39-209ENST00000556909 SLC35G3Q8N808 338 aa13.28□□□□□ -0.28
VIPAS39-209ENST00000556909 SCPEP1Q9HB40 452 aa13.28□□□□□ -0.28
VIPAS39-209ENST00000556909 K7EQG2 157 aa13.27□□□□□ -0.29
VIPAS39-209ENST00000556909 P0C879 139 aa13.27□□□□□ -0.29
VIPAS39-209ENST00000556909 RCVRNP35243 200 aa13.27□□□□□ -0.29
VIPAS39-209ENST00000556909 TMEM41BQ5BJD5 291 aa13.27□□□□□ -0.29
VIPAS39-209ENST00000556909 SNX29P2Q8IUI4 249 aa13.27□□□□□ -0.29
VIPAS39-209ENST00000556909 STXBP6Q8NFX7 210 aa13.27□□□□□ -0.29
VIPAS39-209ENST00000556909 YIPF6Q96EC8 236 aa13.27□□□□□ -0.29
VIPAS39-209ENST00000556909 GRAMD2BQ96HH9 432 aa13.27□□□□□ -0.29
VIPAS39-209ENST00000556909 MRPL36Q9P0J6 103 aaKnown RBP13.27□□□□□ -0.29
VIPAS39-209ENST00000556909 A0A0B4J293 547 aa13.26□□□□□ -0.29
VIPAS39-209ENST00000556909 A0A1W2PS18 150 aa13.26□□□□□ -0.29
VIPAS39-209ENST00000556909 ZNF705EA8MWA4 302 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms