RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 PHLDA2Q53GA4 152 aa12.65□□□□□ -0.38
CHGA-206ENST00000556876 TMEM41BQ5BJD5 291 aa12.65□□□□□ -0.38
CHGA-206ENST00000556876 TBC1D26Q86UD7 250 aa12.65□□□□□ -0.38
CHGA-206ENST00000556876 GPX8Q8TED1 209 aa12.65□□□□□ -0.38
CHGA-206ENST00000556876 ZNF486Q96H40 463 aaPredicted RBP12.65□□□□□ -0.38
CHGA-206ENST00000556876 SEC22AQ96IW7 307 aa12.65□□□□□ -0.38
CHGA-206ENST00000556876 FXYD6Q9H0Q3 95 aa12.65□□□□□ -0.38
CHGA-206ENST00000556876 C11orf68Q9H3H3 251 aaKnown RBP12.65□□□□□ -0.38
CHGA-206ENST00000556876 A0A087WXM4 84 aa12.64□□□□□ -0.39
CHGA-206ENST00000556876 A0A1W2PS18 150 aa12.64□□□□□ -0.39
CHGA-206ENST00000556876 INS-IGF2F8WCM5 200 aa12.64□□□□□ -0.39
CHGA-206ENST00000556876 DNASE2O00115 360 aaPredicted RBP12.64□□□□□ -0.39
CHGA-206ENST00000556876 FAM90A2PQ658T7 463 aa12.64□□□□□ -0.39
CHGA-206ENST00000556876 C11orf45Q8TAV5 145 aa12.64□□□□□ -0.39
CHGA-206ENST00000556876 ZNF600Q6ZNG1 722 aa12.63□□□□□ -0.39
CHGA-206ENST00000556876 APRG1Q8IVJ8 170 aa12.63□□□□□ -0.39
CHGA-206ENST00000556876 PDCD10Q9BUL8 212 aa12.63□□□□□ -0.39
CHGA-206ENST00000556876 IGHV3OR16-8A0A075B7F1 116 aa12.62□□□□□ -0.39
CHGA-206ENST00000556876 B3GALNT1O75752 331 aa12.62□□□□□ -0.39
CHGA-206ENST00000556876 TFPI2P48307 235 aa12.62□□□□□ -0.39
CHGA-206ENST00000556876 RND3P61587 244 aa12.62□□□□□ -0.39
CHGA-206ENST00000556876 EWSR1Q01844 656 aaKnown RBP eCLIP12.62□□□□□ -0.39
CHGA-206ENST00000556876 TMEM187Q14656 261 aa12.62□□□□□ -0.39
CHGA-206ENST00000556876 RBMS2Q15434 407 aaKnown RBP12.62□□□□□ -0.39
CHGA-206ENST00000556876 TCF24Q7RTU0 167 aa12.62□□□□□ -0.39
CHGA-206ENST00000556876 CENPSQ8N2Z9 138 aa12.62□□□□□ -0.39
CHGA-206ENST00000556876 OR11H2Q8NH07 326 aa12.62□□□□□ -0.39
CHGA-206ENST00000556876 C15orf40Q8WUR7 153 aa12.62□□□□□ -0.39
CHGA-206ENST00000556876 PINX1Q96BK5 328 aaKnown RBP12.62□□□□□ -0.39
CHGA-206ENST00000556876 NARS2Q96I59 477 aaKnown RBP12.62□□□□□ -0.39
CHGA-206ENST00000556876 VSIRQ9H7M9 311 aa12.62□□□□□ -0.39
CHGA-206ENST00000556876 DBX1A6NMT0 343 aa12.61□□□□□ -0.39
CHGA-206ENST00000556876 ST8SIA3O43173 380 aa12.61□□□□□ -0.39
CHGA-206ENST00000556876 TBPP20226 339 aa12.61□□□□□ -0.39
CHGA-206ENST00000556876 EIF2B2P49770 351 aaKnown RBP12.61□□□□□ -0.39
CHGA-206ENST00000556876 TOMM20LQ6UXN7 152 aa12.61□□□□□ -0.39
CHGA-206ENST00000556876 MRGPRFQ96AM1 343 aa12.61□□□□□ -0.39
CHGA-206ENST00000556876 YIPF6Q96EC8 236 aa12.61□□□□□ -0.39
CHGA-206ENST00000556876 COMMD3Q9UBI1 195 aa12.61□□□□□ -0.39
CHGA-206ENST00000556876 KMT2AQ03164 3969 aa12.61□□□□□ -0.39
CHGA-206ENST00000556876 C11orf94C9JXX5 98 aa12.6□□□□□ -0.39
CHGA-206ENST00000556876 IFNA17P01571 189 aa12.6□□□□□ -0.39
CHGA-206ENST00000556876 NPPCP23582 126 aa12.6□□□□□ -0.39
CHGA-206ENST00000556876 RPL11P62913 178 aaKnown RBP12.6□□□□□ -0.39
CHGA-206ENST00000556876 ARRDC1Q8N5I2 433 aa12.6□□□□□ -0.39
CHGA-206ENST00000556876 SLC35G3Q8N808 338 aa12.6□□□□□ -0.39
CHGA-206ENST00000556876 C2CD4CQ8TF44 421 aa12.6□□□□□ -0.39
CHGA-206ENST00000556876 ENY2Q9NPA8 101 aa12.6□□□□□ -0.39
CHGA-206ENST00000556876 CACFD1Q9UGQ2 172 aa12.6□□□□□ -0.39
CHGA-206ENST00000556876 IGKV3-7A0A075B6H7 116 aa12.59□□□□□ -0.39
CHGA-206ENST00000556876 TRAV30A0A087WSZ9 112 aa12.59□□□□□ -0.39
CHGA-206ENST00000556876 TNFAIP8O95379 198 aa12.59□□□□□ -0.39
CHGA-206ENST00000556876 CA1P00915 261 aaPredicted RBP12.59□□□□□ -0.39
CHGA-206ENST00000556876 RPL5P46777 297 aaKnown RBP12.59□□□□□ -0.39
CHGA-206ENST00000556876 AKR1C2P52895 323 aa12.59□□□□□ -0.39
CHGA-206ENST00000556876 MZT2AQ6P582 158 aa12.59□□□□□ -0.39
CHGA-206ENST00000556876 MORN3Q6PF18 240 aaPredicted RBP12.59□□□□□ -0.39
CHGA-206ENST00000556876 STHQ8IWL8 128 aa12.59□□□□□ -0.39
CHGA-206ENST00000556876 GBGT1Q8N5D6 347 aa12.59□□□□□ -0.39
CHGA-206ENST00000556876 ZFAND1Q8TCF1 268 aa12.59□□□□□ -0.39
CHGA-206ENST00000556876 AP3S1Q92572 193 aa12.59□□□□□ -0.39
CHGA-206ENST00000556876 RRNAD1Q96FB5 475 aaKnown RBP12.59□□□□□ -0.39
CHGA-206ENST00000556876 METTL26Q96S19 204 aa12.59□□□□□ -0.39
CHGA-206ENST00000556876 MS4A6AQ9H2W1 248 aa12.59□□□□□ -0.39
CHGA-206ENST00000556876 HRH4Q9H3N8 390 aa12.59□□□□□ -0.39
CHGA-206ENST00000556876 IGHV3-49A0A0A0MS15 119 aa12.58□□□□□ -0.4
CHGA-206ENST00000556876 TMEM50AO95807 157 aa12.58□□□□□ -0.4
CHGA-206ENST00000556876 IGKV1-39P01597 117 aa12.58□□□□□ -0.4
CHGA-206ENST00000556876 IGKV1D-39P04432 117 aa12.58□□□□□ -0.4
CHGA-206ENST00000556876 PGAM2P15259 253 aa12.58□□□□□ -0.4
CHGA-206ENST00000556876 RORCP51449 518 aa12.58□□□□□ -0.4
CHGA-206ENST00000556876 LSM3P62310 102 aaKnown RBP12.58□□□□□ -0.4
CHGA-206ENST00000556876 RNASE10Q5GAN6 216 aaKnown RBP12.58□□□□□ -0.4
CHGA-206ENST00000556876 PVRIGQ6DKI7 326 aa12.58□□□□□ -0.4
CHGA-206ENST00000556876 SNX29P2Q8IUI4 249 aa12.58□□□□□ -0.4
CHGA-206ENST00000556876 CCDC71LQ8N9Z2 235 aa12.58□□□□□ -0.4
CHGA-206ENST00000556876 GRAMD2BQ96HH9 432 aa12.58□□□□□ -0.4
CHGA-206ENST00000556876 PUS1Q9Y606 427 aaKnown RBP eCLIP12.58□□□□□ -0.4
CHGA-206ENST00000556876 RPS10-NUDT3A0A1W2PQS6 291 aa12.57□□□□□ -0.4
CHGA-206ENST00000556876 SPP1P10451 314 aa12.57□□□□□ -0.4
CHGA-206ENST00000556876 AP2S1P53680 142 aaPredicted RBP12.57□□□□□ -0.4
CHGA-206ENST00000556876 PIGPP57054 158 aa12.57□□□□□ -0.4
CHGA-206ENST00000556876 DEFB131AP59861 70 aa12.57□□□□□ -0.4
CHGA-206ENST00000556876 FAM219AQ8IW50 185 aa12.57□□□□□ -0.4
CHGA-206ENST00000556876 ST8SIA2Q92186 375 aa12.57□□□□□ -0.4
CHGA-206ENST00000556876 ZNF414Q96IQ9 312 aa12.57□□□□□ -0.4
CHGA-206ENST00000556876 COPZ2Q9P299 210 aa12.57□□□□□ -0.4
CHGA-206ENST00000556876 CLN5O75503 358 aa12.56□□□□□ -0.4
CHGA-206ENST00000556876 TGFBR1P36897 503 aa12.56□□□□□ -0.4
CHGA-206ENST00000556876 OR4X1Q8NH49 305 aa12.56□□□□□ -0.4
CHGA-206ENST00000556876 TMEM230Q96A57 120 aa12.56□□□□□ -0.4
CHGA-206ENST00000556876 FBXL17Q9UF56 701 aa12.56□□□□□ -0.4
CHGA-206ENST00000556876 IGHV3OR16-13A0A075B7E8 117 aa12.55□□□□□ -0.4
CHGA-206ENST00000556876 IGHV3-74A0A0B4J1X5 117 aa12.55□□□□□ -0.4
CHGA-206ENST00000556876 A0A0B4J293 547 aa12.55□□□□□ -0.4
CHGA-206ENST00000556876 C3orf85A0A1B0GTC6 90 aa12.55□□□□□ -0.4
CHGA-206ENST00000556876 IGHV3-48P01763 117 aa12.55□□□□□ -0.4
CHGA-206ENST00000556876 MIFP14174 115 aa12.55□□□□□ -0.4
CHGA-206ENST00000556876 CRYBB3P26998 211 aa12.55□□□□□ -0.4
CHGA-206ENST00000556876 HOXA1P49639 335 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms