RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 ETV7Q9Y603 341 aa7.4□□□□□ -1.22
SCFD1-220ENST00000556486 DNAH6Q9C0G6 4158 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 ANKRD65E5RJM6 399 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 UPK2O00526 184 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 XRCC3O43542 346 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 IGHV3-23P01764 117 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 HNRNPCP07910 306 aaKnown RBP eCLIP7.39□□□□□ -1.237e-6■□□□□ 10.8
SCFD1-220ENST00000556486 FCGR2CP31995 323 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 GPR183P32249 361 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 BMI1P35226 326 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 APOC4P55056 127 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 CATR1Q13166 79 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 SPSB3Q6PJ21 355 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 PET117Q6UWS5 81 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 IZUMO2Q6UXV1 221 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 RBPMS2Q6ZRY4 209 aaKnown RBP7.39□□□□□ -1.23
SCFD1-220ENST00000556486 SSX9Q7RTT3 188 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 GDPD1Q8N9F7 314 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 OR1L6Q8NGR2 347 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 SECTM1Q8WVN6 248 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 GIMAP1Q8WWP7 306 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 SLC25A38Q96DW6 304 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 CNBD2Q96M20 576 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 QTRT1Q9BXR0 403 aaKnown RBP7.39□□□□□ -1.23
SCFD1-220ENST00000556486 COMMD5Q9GZQ3 224 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 DAZ1Q9NQZ3 744 aaKnown RBP7.39□□□□□ -1.23
SCFD1-220ENST00000556486 CCL28Q9NRJ3 127 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 COMMD9Q9P000 198 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 RAB26Q9ULW5 256 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 S4R3C0 116 aa7.39□□□□□ -1.23
SCFD1-220ENST00000556486 A0A0A0MQY5 61 aa7.38□□□□□ -1.23
SCFD1-220ENST00000556486 SMIM30A4D0T7 59 aa7.38□□□□□ -1.23
SCFD1-220ENST00000556486 CYB5BO43169 146 aa7.38□□□□□ -1.23
SCFD1-220ENST00000556486 TGOLN2O43493 480 aa7.38□□□□□ -1.23
SCFD1-220ENST00000556486 REG1AP05451 166 aa7.38□□□□□ -1.23
SCFD1-220ENST00000556486 ARPC4P59998 168 aa7.38□□□□□ -1.23
SCFD1-220ENST00000556486 NANOS2P60321 138 aaKnown RBP7.38□□□□□ -1.23
SCFD1-220ENST00000556486 ZNF585BQ52M93 769 aa7.38□□□□□ -1.23
SCFD1-220ENST00000556486 PLET1Q6UQ28 207 aa7.38□□□□□ -1.23
SCFD1-220ENST00000556486 BORCS5Q969J3 196 aa7.38□□□□□ -1.23
SCFD1-220ENST00000556486 BSCL2Q96G97 398 aaPredicted RBP7.38□□□□□ -1.23
SCFD1-220ENST00000556486 HRASLSQ9HDD0 168 aa7.38□□□□□ -1.23
SCFD1-220ENST00000556486 UBQLN2Q9UHD9 624 aa7.38□□□□□ -1.23
SCFD1-220ENST00000556486 RRP15Q9Y3B9 282 aaKnown RBP7.38□□□□□ -1.23
SCFD1-220ENST00000556486 PKD1P98161 4303 aa7.38□□□□□ -1.23
SCFD1-220ENST00000556486 TRAV3A0A0B4J244 114 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 A0A1B0GVY2 172 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 K7EMT4 169 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 SULT1C2O00338 296 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 NDUFA4O00483 81 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 TNFSF12O43508 249 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 SERPINE2P07093 398 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 ZNF182P17025 639 aaPredicted RBP7.37□□□□□ -1.23
SCFD1-220ENST00000556486 GNRHRP30968 328 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 SDC2P34741 201 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 CBX5P45973 191 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 WT1-ASQ06250 92 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 ODF3L2Q3SX64 289 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 DHRS11Q6UWP2 260 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 Q6ZNX1 250 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 ZNF818PQ6ZRF7 136 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 TBC1D26Q86UD7 250 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 SLC38A6Q8IZM9 456 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 GVQW1Q8N7I0 195 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 OR5AP2Q8NGF4 316 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 RNF183Q96D59 192 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 SLC5A7Q9GZV3 580 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 AUNIPQ9H7T9 357 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 NDUFA4L2Q9NRX3 87 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 SSR3Q9UNL2 185 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 DNAH17Q9UFH2 4485 aa7.37□□□□□ -1.23
SCFD1-220ENST00000556486 TRAV18A0A075B6X5 111 aa7.36□□□□□ -1.23
SCFD1-220ENST00000556486 C15orf62A8K5M9 175 aa7.36□□□□□ -1.23
SCFD1-220ENST00000556486 TRAPPC2P0DI81 140 aa7.36□□□□□ -1.23
SCFD1-220ENST00000556486 TRAPPC2BP0DI82 140 aa7.36□□□□□ -1.23
SCFD1-220ENST00000556486 PTHLHP12272 177 aa7.36□□□□□ -1.23
SCFD1-220ENST00000556486 PSMB9P28065 219 aa7.36□□□□□ -1.23
SCFD1-220ENST00000556486 CST9LP1Q5W188 147 aa7.36□□□□□ -1.23
SCFD1-220ENST00000556486 LAMTOR1Q6IAA8 161 aa7.36□□□□□ -1.23
SCFD1-220ENST00000556486 OR10W1Q8NGF6 305 aa7.36□□□□□ -1.23
SCFD1-220ENST00000556486 OR1L8Q8NGR8 309 aa7.36□□□□□ -1.23
SCFD1-220ENST00000556486 OR5H6Q8NGV6 325 aa7.36□□□□□ -1.23
SCFD1-220ENST00000556486 DAZAP1Q96EP5 407 aaKnown RBP7.36□□□□□ -1.23
SCFD1-220ENST00000556486 YTHDF1Q9BYJ9 559 aaKnown RBP7.36□□□□□ -1.23
SCFD1-220ENST00000556486 FAM212BQ9NTI7 297 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-220ENST00000556486 ANAPC10Q9UM13 185 aa7.36□□□□□ -1.23
SCFD1-220ENST00000556486 F11RQ9Y624 299 aaKnown RBP7.36□□□□□ -1.23
SCFD1-220ENST00000556486 DNAH11Q96DT5 4516 aa7.35□□□□□ -1.23
SCFD1-220ENST00000556486 TEX50A0A1B0GTY4 177 aa7.35□□□□□ -1.23
SCFD1-220ENST00000556486 OR4C46A6NHA9 309 aa7.35□□□□□ -1.23
SCFD1-220ENST00000556486 K7EIM0 57 aa7.35□□□□□ -1.23
SCFD1-220ENST00000556486 S1PR2O95136 353 aa7.35□□□□□ -1.23
SCFD1-220ENST00000556486 OR13C7P0DN81 318 aa7.35□□□□□ -1.23
SCFD1-220ENST00000556486 RPL35AP18077 110 aaKnown RBP7.35□□□□□ -1.23
SCFD1-220ENST00000556486 F2RP25116 425 aa7.35□□□□□ -1.23
SCFD1-220ENST00000556486 FCGR2BP31994 310 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-220ENST00000556486 MFAP2P55001 183 aa7.35□□□□□ -1.23
SCFD1-220ENST00000556486 DMBX1Q8NFW5 382 aa7.35□□□□□ -1.23
SCFD1-220ENST00000556486 OR5B3Q8NH48 314 aa7.35□□□□□ -1.23
SCFD1-220ENST00000556486 OR51H1Q8NH63 302 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms