RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 TMEM231Q9H6L2 316 aa10□□□□□ -0.81
ACTN1-219ENST00000556432 SCRT2Q9NQ03 307 aa10□□□□□ -0.81
ACTN1-219ENST00000556432 COMMD9Q9P000 198 aa10□□□□□ -0.81
ACTN1-219ENST00000556432 MARCH11A6NNE9 402 aa9.99□□□□□ -0.81
ACTN1-219ENST00000556432 PTHLHP12272 177 aa9.99□□□□□ -0.81
ACTN1-219ENST00000556432 MYL9P24844 172 aa9.99□□□□□ -0.81
ACTN1-219ENST00000556432 EMP1P54849 157 aa9.99□□□□□ -0.81
ACTN1-219ENST00000556432 TOMM20LQ6UXN7 152 aa9.99□□□□□ -0.81
ACTN1-219ENST00000556432 TMEM17Q86X19 198 aa9.99□□□□□ -0.81
ACTN1-219ENST00000556432 OR1P1Q8NH06 330 aa9.99□□□□□ -0.81
ACTN1-219ENST00000556432 PINX1Q96BK5 328 aaKnown RBP9.99□□□□□ -0.81
ACTN1-219ENST00000556432 TMEM56Q96MV1 263 aa9.99□□□□□ -0.81
ACTN1-219ENST00000556432 TXN2Q99757 166 aa9.99□□□□□ -0.81
ACTN1-219ENST00000556432 VSIRQ9H7M9 311 aa9.99□□□□□ -0.81
ACTN1-219ENST00000556432 ACOT13Q9NPJ3 140 aa9.99□□□□□ -0.81
ACTN1-219ENST00000556432 SCN3BQ9NY72 215 aa9.99□□□□□ -0.81
ACTN1-219ENST00000556432 HERC1Q15751 4861 aa9.99□□□□□ -0.81
ACTN1-219ENST00000556432 PPYP01298 95 aa9.98□□□□□ -0.81
ACTN1-219ENST00000556432 HTN3P15516 51 aa9.98□□□□□ -0.81
ACTN1-219ENST00000556432 HSPA13P48723 471 aa9.98□□□□□ -0.81
ACTN1-219ENST00000556432 TNP2Q05952 138 aa9.98□□□□□ -0.81
ACTN1-219ENST00000556432 TSPAN14Q8NG11 270 aa9.98□□□□□ -0.81
ACTN1-219ENST00000556432 MOB3AQ96BX8 217 aa9.98□□□□□ -0.81
ACTN1-219ENST00000556432 DMBT1Q9UGM3 2413 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-219ENST00000556432 SMIM30A4D0T7 59 aa9.97□□□□□ -0.81
ACTN1-219ENST00000556432 SSX5O60225 188 aa9.97□□□□□ -0.81
ACTN1-219ENST00000556432 MT-CO2P00403 227 aa9.97□□□□□ -0.81
ACTN1-219ENST00000556432 KRASP01116 189 aa9.97□□□□□ -0.81
ACTN1-219ENST00000556432 RAB3BP20337 219 aa9.97□□□□□ -0.81
ACTN1-219ENST00000556432 MLLT11Q13015 90 aaPredicted RBP9.97□□□□□ -0.81
ACTN1-219ENST00000556432 ZNF818PQ6ZRF7 136 aa9.97□□□□□ -0.81
ACTN1-219ENST00000556432 TPRA1Q86W33 373 aa9.97□□□□□ -0.81
ACTN1-219ENST00000556432 CSNK1G2-AS1Q8NCQ2 148 aa9.97□□□□□ -0.81
ACTN1-219ENST00000556432 BEST4Q8NFU0 473 aa9.97□□□□□ -0.81
ACTN1-219ENST00000556432 PRNDQ9UKY0 176 aa9.97□□□□□ -0.81
ACTN1-219ENST00000556432 PUS1Q9Y606 427 aaKnown RBP eCLIP9.97□□□□□ -0.81
ACTN1-219ENST00000556432 TRAV1-2A0A0B4J238 106 aa9.96□□□□□ -0.82
ACTN1-219ENST00000556432 I3L2K1 104 aa9.96□□□□□ -0.82
ACTN1-219ENST00000556432 K7EQG2 157 aa9.96□□□□□ -0.82
ACTN1-219ENST00000556432 RLN1P04808 185 aa9.96□□□□□ -0.82
ACTN1-219ENST00000556432 FCER2P06734 321 aa9.96□□□□□ -0.82
ACTN1-219ENST00000556432 SPART-AS1P0CW21 52 aa9.96□□□□□ -0.82
ACTN1-219ENST00000556432 G6PCP35575 357 aa9.96□□□□□ -0.82
ACTN1-219ENST00000556432 NUTF2P61970 127 aaKnown RBP9.96□□□□□ -0.82
ACTN1-219ENST00000556432 RNF212Q495C1 297 aa9.96□□□□□ -0.82
ACTN1-219ENST00000556432 GRAMD2BQ96HH9 432 aa9.96□□□□□ -0.82
ACTN1-219ENST00000556432 FAM210BQ96KR6 192 aa9.96□□□□□ -0.82
ACTN1-219ENST00000556432 C1QTNF4Q9BXJ3 329 aa9.96□□□□□ -0.82
ACTN1-219ENST00000556432 XCL2Q9UBD3 114 aa9.96□□□□□ -0.82
ACTN1-219ENST00000556432 RAB26Q9ULW5 256 aa9.96□□□□□ -0.82
ACTN1-219ENST00000556432 A0A1W2PS18 150 aa9.95□□□□□ -0.82
ACTN1-219ENST00000556432 SCGNO76038 276 aa9.95□□□□□ -0.82
ACTN1-219ENST00000556432 NPPCP23582 126 aa9.95□□□□□ -0.82
ACTN1-219ENST00000556432 HERV-K104P61576 105 aa9.95□□□□□ -0.82
ACTN1-219ENST00000556432 PSMG4Q5JS54 123 aa9.95□□□□□ -0.82
ACTN1-219ENST00000556432 ZNF600Q6ZNG1 722 aa9.95□□□□□ -0.82
ACTN1-219ENST00000556432 NARS2Q96I59 477 aaKnown RBP9.95□□□□□ -0.82
ACTN1-219ENST00000556432 MGLLQ99685 303 aa9.95□□□□□ -0.82
ACTN1-219ENST00000556432 FKBP11Q9NYL4 201 aa9.95□□□□□ -0.82
ACTN1-219ENST00000556432 TMED3Q9Y3Q3 217 aa9.95□□□□□ -0.82
ACTN1-219ENST00000556432 RGS10O43665 173 aa9.94□□□□□ -0.82
ACTN1-219ENST00000556432 LPAR6P43657 344 aa9.94□□□□□ -0.82
ACTN1-219ENST00000556432 P2RY1P47900 373 aa9.94□□□□□ -0.82
ACTN1-219ENST00000556432 NPBWR1P48145 328 aa9.94□□□□□ -0.82
ACTN1-219ENST00000556432 METTL26Q96S19 204 aa9.94□□□□□ -0.82
ACTN1-219ENST00000556432 DUSP21Q9H596 190 aa9.94□□□□□ -0.82
ACTN1-219ENST00000556432 RNF167Q9H6Y7 350 aa9.94□□□□□ -0.82
ACTN1-219ENST00000556432 IGHV3OR16-12A0A075B7B8 117 aa9.93□□□□□ -0.82
ACTN1-219ENST00000556432 TMEM189A5PLL7 270 aa9.93□□□□□ -0.82
ACTN1-219ENST00000556432 DBX1A6NMT0 343 aa9.93□□□□□ -0.82
ACTN1-219ENST00000556432 F2RP25116 425 aa9.93□□□□□ -0.82
ACTN1-219ENST00000556432 DHRS2Q13268 280 aa9.93□□□□□ -0.82
ACTN1-219ENST00000556432 ZNF367Q7RTV3 350 aa9.93□□□□□ -0.82
ACTN1-219ENST00000556432 FCAMRQ8WWV6 532 aa9.93□□□□□ -0.82
ACTN1-219ENST00000556432 BORCS5Q969J3 196 aa9.93□□□□□ -0.82
ACTN1-219ENST00000556432 RAB40CQ96S21 281 aa9.93□□□□□ -0.82
ACTN1-219ENST00000556432 TSC22D3Q99576 134 aa9.93□□□□□ -0.82
ACTN1-219ENST00000556432 ATG101Q9BSB4 218 aa9.93□□□□□ -0.82
ACTN1-219ENST00000556432 ZFAND3Q9H8U3 227 aa9.93□□□□□ -0.82
ACTN1-219ENST00000556432 TPRKBQ9Y3C4 175 aa9.93□□□□□ -0.82
ACTN1-219ENST00000556432 A0A1B0GU03 582 aa9.92□□□□□ -0.82
ACTN1-219ENST00000556432 HELTA6NFD8 242 aa9.92□□□□□ -0.82
ACTN1-219ENST00000556432 FGF9P31371 208 aaPredicted RBP9.92□□□□□ -0.82
ACTN1-219ENST00000556432 EIF2B2P49770 351 aaKnown RBP9.92□□□□□ -0.82
ACTN1-219ENST00000556432 DCANP1Q8TF63 244 aa9.92□□□□□ -0.82
ACTN1-219ENST00000556432 NACAE9PAV3 2078 aa9.91□□□□□ -0.82
ACTN1-219ENST00000556432 TEX48A0A1B0GUV7 120 aa9.91□□□□□ -0.82
ACTN1-219ENST00000556432 PPP5CP53041 499 aa9.91□□□□□ -0.82
ACTN1-219ENST00000556432 C22orf42Q6IC83 251 aa9.91□□□□□ -0.82
ACTN1-219ENST00000556432 TMEM88Q6PEY1 159 aa9.91□□□□□ -0.82
ACTN1-219ENST00000556432 PRSS48Q7RTY5 328 aa9.91□□□□□ -0.82
ACTN1-219ENST00000556432 HOGA1Q86XE5 327 aa9.91□□□□□ -0.82
ACTN1-219ENST00000556432 C6orf223Q8N319 242 aa9.91□□□□□ -0.82
ACTN1-219ENST00000556432 OR4A16Q8NH70 328 aa9.91□□□□□ -0.82
ACTN1-219ENST00000556432 NIPSNAP3BQ9BS92 247 aa9.91□□□□□ -0.82
ACTN1-219ENST00000556432 Q9H521 79 aa9.91□□□□□ -0.82
ACTN1-219ENST00000556432 DAPK2Q9UIK4 370 aa9.91□□□□□ -0.82
ACTN1-219ENST00000556432 LRP1BQ9NZR2 4599 aa9.9□□□□□ -0.82
ACTN1-219ENST00000556432 TRAV18A0A075B6X5 111 aa9.9□□□□□ -0.82
ACTN1-219ENST00000556432 PGLYRP1O75594 196 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms