RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 LGI3Q8N145 548 aa7.38□□□□□ -1.23
SRP54-210ENST00000556380 CENPSQ8N2Z9 138 aa7.38□□□□□ -1.23
SRP54-210ENST00000556380 OR52E5Q8NH55 327 aa7.38□□□□□ -1.23
SRP54-210ENST00000556380 ZNF502Q8TBZ5 544 aa7.38□□□□□ -1.23
SRP54-210ENST00000556380 VN1R17PQ8TDU5 208 aa7.38□□□□□ -1.23
SRP54-210ENST00000556380 GPR61Q9BZJ8 451 aa7.38□□□□□ -1.23
SRP54-210ENST00000556380 CACNG5Q9UF02 275 aa7.38□□□□□ -1.23
SRP54-210ENST00000556380 TBC1D24Q9ULP9 559 aa7.38□□□□□ -1.23
SRP54-210ENST00000556380 DNAH9Q9NYC9 4486 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 TRBV7-1A0A0A6YYK4 115 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 C9orf170A2RU37 121 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 SEC14L6B5MCN3 397 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 I3L2K1 104 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 CYB5BO43169 146 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 LYRM1O43325 122 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 PITX3O75364 302 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 IGHV3-23P01764 117 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 SPCS3P61009 180 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 IFITM3Q01628 133 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 ID3Q02535 119 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 ZNF846Q147U1 533 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 BSXQ3C1V8 233 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 SPINK9Q5DT21 86 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 C9orf66Q5T8R8 295 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 SLC25A24Q6NUK1 477 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 ACSM6Q6P461 480 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 OR1L6Q8NGR2 347 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 EEF1AKMT3Q96AZ1 226 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 CXorf58Q96LI9 332 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 PLEKHA3Q9HB20 300 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 THYN1Q9P016 225 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 S4R3C0 116 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 SORL1Q92673 2214 aa7.37□□□□□ -1.23
SRP54-210ENST00000556380 DUXBA0A1W2PPF3 345 aa7.36□□□□□ -1.23
SRP54-210ENST00000556380 PPP5D1E7EU14 171 aa7.36□□□□□ -1.23
SRP54-210ENST00000556380 GGCTO75223 188 aaKnown RBP7.36□□□□□ -1.23
SRP54-210ENST00000556380 IFNA17P01571 189 aa7.36□□□□□ -1.23
SRP54-210ENST00000556380 HLA-AP01891 365 aaKnown RBP7.36□□□□□ -1.23
SRP54-210ENST00000556380 PRB2P02812 416 aaPredicted RBP7.36□□□□□ -1.23
SRP54-210ENST00000556380 CLEC3BP05452 202 aa7.36□□□□□ -1.23
SRP54-210ENST00000556380 SULT1A3P0DMM9 295 aa7.36□□□□□ -1.23
SRP54-210ENST00000556380 SULT1A4P0DMN0 295 aa7.36□□□□□ -1.23
SRP54-210ENST00000556380 RNASE2P10153 161 aaKnown RBP7.36□□□□□ -1.23
SRP54-210ENST00000556380 ANXA7P20073 488 aaKnown RBP7.36□□□□□ -1.23
SRP54-210ENST00000556380 VAMP1P23763 118 aa7.36□□□□□ -1.23
SRP54-210ENST00000556380 INSL3P51460 131 aa7.36□□□□□ -1.23
SRP54-210ENST00000556380 MECP2P51608 486 aaKnown RBP7.36□□□□□ -1.23
SRP54-210ENST00000556380 SYNJ2BPP57105 145 aa7.36□□□□□ -1.23
SRP54-210ENST00000556380 ERHP84090 104 aaKnown RBP7.36□□□□□ -1.23
SRP54-210ENST00000556380 ASAH1Q13510 395 aa7.36□□□□□ -1.23
SRP54-210ENST00000556380 CLEC19AQ6UXS0 136 aa7.36□□□□□ -1.23
SRP54-210ENST00000556380 WFDC3Q8IUB2 231 aa7.36□□□□□ -1.23
SRP54-210ENST00000556380 RNASE11Q8TAA1 199 aaKnown RBP7.36□□□□□ -1.23
SRP54-210ENST00000556380 SCARB1Q8WTV0 552 aa7.36□□□□□ -1.23
SRP54-210ENST00000556380 ZNF414Q96IQ9 312 aa7.36□□□□□ -1.23
SRP54-210ENST00000556380 ATP6V0BQ99437 205 aa7.36□□□□□ -1.23
SRP54-210ENST00000556380 A0A1B0GU03 582 aa7.35□□□□□ -1.23
SRP54-210ENST00000556380 UPK1BO75841 260 aa7.35□□□□□ -1.23
SRP54-210ENST00000556380 OR2C1O95371 312 aa7.35□□□□□ -1.23
SRP54-210ENST00000556380 TCRBP04435 133 aa7.35□□□□□ -1.23
SRP54-210ENST00000556380 CSN3P07498 182 aa7.35□□□□□ -1.23
SRP54-210ENST00000556380 OR4E1P0C645 316 aa7.35□□□□□ -1.23
SRP54-210ENST00000556380 SLC25A6P12236 298 aa7.35□□□□□ -1.23
SRP54-210ENST00000556380 TNFRSF9Q07011 255 aa7.35□□□□□ -1.23
SRP54-210ENST00000556380 DHRS2Q13268 280 aa7.35□□□□□ -1.23
SRP54-210ENST00000556380 SMCO1Q147U7 214 aa7.35□□□□□ -1.23
SRP54-210ENST00000556380 RPEL1Q2QD12 228 aa7.35□□□□□ -1.23
SRP54-210ENST00000556380 ADAMTSL5Q6ZMM2 481 aa7.35□□□□□ -1.23
SRP54-210ENST00000556380 GPHB5Q86YW7 130 aa7.35□□□□□ -1.23
SRP54-210ENST00000556380 OR9G4Q8NGQ1 327 aa7.35□□□□□ -1.23
SRP54-210ENST00000556380 TMEM170AQ8WVE7 144 aa7.35□□□□□ -1.23
SRP54-210ENST00000556380 AURKAIP1Q9NWT8 199 aaPredicted RBP7.35□□□□□ -1.23
SRP54-210ENST00000556380 C21orf62Q9NYP8 219 aa7.35□□□□□ -1.23
SRP54-210ENST00000556380 HSPB7Q9UBY9 170 aa7.35□□□□□ -1.23
SRP54-210ENST00000556380 IGHV3-21A0A0B4J1V1 117 aa7.34□□□□□ -1.23
SRP54-210ENST00000556380 WI2-2373I1.2A0A1W2PRP0 233 aa7.34□□□□□ -1.23
SRP54-210ENST00000556380 K7EIL1 84 aa7.34□□□□□ -1.23
SRP54-210ENST00000556380 LGALS9O00182 355 aa7.34□□□□□ -1.23
SRP54-210ENST00000556380 MT-CO2P00403 227 aa7.34□□□□□ -1.23
SRP54-210ENST00000556380 CTSGP08311 255 aa7.34□□□□□ -1.23
SRP54-210ENST00000556380 FCGR2BP31994 310 aaPredicted RBP7.34□□□□□ -1.23
SRP54-210ENST00000556380 ARL3P36405 182 aa7.34□□□□□ -1.23
SRP54-210ENST00000556380 C11orf87Q6NUJ2 197 aa7.34□□□□□ -1.23
SRP54-210ENST00000556380 MZT2BQ6NZ67 158 aa7.34□□□□□ -1.23
SRP54-210ENST00000556380 REC114Q7Z4M0 266 aa7.34□□□□□ -1.23
SRP54-210ENST00000556380 LYG2Q86SG7 212 aa7.34□□□□□ -1.23
SRP54-210ENST00000556380 MISP3Q96FF7 219 aa7.34□□□□□ -1.23
SRP54-210ENST00000556380 CHRDL1Q9BU40 450 aa7.34□□□□□ -1.23
SRP54-210ENST00000556380 PDCD10Q9BUL8 212 aa7.34□□□□□ -1.23
SRP54-210ENST00000556380 C20orf85Q9H1P6 137 aa7.34□□□□□ -1.23
SRP54-210ENST00000556380 SIGLEC8Q9NYZ4 499 aa7.34□□□□□ -1.23
SRP54-210ENST00000556380 TMED3Q9Y3Q3 217 aa7.34□□□□□ -1.23
SRP54-210ENST00000556380 TGOLN2O43493 480 aa7.33□□□□□ -1.24
SRP54-210ENST00000556380 SAP30O75446 220 aa7.33□□□□□ -1.24
SRP54-210ENST00000556380 IGLV1-51P01701 117 aa7.33□□□□□ -1.24
SRP54-210ENST00000556380 HOXB5P09067 269 aa7.33□□□□□ -1.24
SRP54-210ENST00000556380 GPR183P32249 361 aa7.33□□□□□ -1.24
SRP54-210ENST00000556380 SNCAP37840 140 aa7.33□□□□□ -1.24
SRP54-210ENST00000556380 HTR2BP41595 481 aa7.33□□□□□ -1.24
SRP54-210ENST00000556380 HOXA1P49639 335 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms