RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 TIMD4Q96H15 378 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 REEP6Q96HR9 211 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 LYSTQ99698 3801 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 ATP5SQ99766 215 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 HSPB9Q9BQS6 159 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 MARVELD1Q9BSK0 173 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 FAAP24Q9BTP7 215 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 RSPO3Q9BXY4 272 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-209ENST00000556353 DCAF13Q9NV06 445 aaKnown RBP2.98□□□□□ -1.93
PRPF39-209ENST00000556353 C1orf123Q9NWV4 160 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 ZNF226Q9NYT6 803 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 IL36GQ9NZH8 169 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 OR1A1Q9P1Q5 309 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 C14orf166Q9Y224 244 aaKnown RBP2.98□□□□□ -1.93
PRPF39-209ENST00000556353 TRAPPC4Q9Y296 219 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 TP53TG1Q9Y2A0 90 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 FIS1Q9Y3D6 152 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 AP4S1Q9Y587 144 aa2.98□□□□□ -1.93
PRPF39-209ENST00000556353 TRAV30A0A087WSZ9 112 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 A0A087WUJ7 227 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 TRAV39A0A0B4J263 110 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 IGHV2-70DA0A0C4DH43 119 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 A0A1W2PQD3 144 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 A0A1W2PRE2 83 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 TMEM218A2RU14 115 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 MAP1LC3B2A6NCE7 125 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 DHRS7CA6NNS2 312 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 C1orf196B1AJZ1 125 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 CLDN25C9JDP6 229 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 H0YL77 283 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 DEGS1O15121 323 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 MPDU1O75352 247 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 LY6HO94772 140 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 IGHV2-5P01817 119 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 DBIP07108 87 aaKnown RBP2.97□□□□□ -1.93
PRPF39-209ENST00000556353 LINC00032P0C843 101 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 UBBP0CG47 229 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 SMIM17P0DL12 118 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 OR5H8P0DN80 308 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 MYL12AP19105 171 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 RAB3BP20337 219 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 KIR2DS4P43632 304 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 CD164Q04900 197 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 ATXN7L3Q14CW9 347 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-209ENST00000556353 LTC4SQ16873 150 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 TMEM241Q24JQ0 296 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 LRRC75BQ2VPJ9 315 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 ATP6AP1LQ52LC2 224 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 DCST2Q5T1A1 773 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 NCMAPQ5T1S8 102 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 FAM162BQ5T6X4 162 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 CPTPQ5TA50 214 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 ZFAND6Q6FIF0 208 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 TBPL2Q6SJ96 375 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 ZNF620Q6ZNG0 422 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 SLC25A48Q6ZT89 311 aaKnown RBP2.97□□□□□ -1.93
PRPF39-209ENST00000556353 TCTE3Q8IZS6 198 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 CLECL1Q8IZS7 167 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 CBR4Q8N4T8 237 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 COX18Q8N8Q8 333 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 OR10G4Q8NGN3 311 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 OR9I1Q8NGQ6 314 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 OR5K1Q8NHB7 308 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 TWIST2Q8WVJ9 160 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 UPRTQ96BW1 309 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 P2RX4Q99571 388 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 TBX5Q99593 518 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 CMSS1Q9BQ75 279 aaKnown RBP2.97□□□□□ -1.93
PRPF39-209ENST00000556353 SCRT1Q9BWW7 348 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 TAPBPLQ9BX59 468 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 SNHG12Q9BXW3 62 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 MAP1LC3BQ9GZQ8 125 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 OR51J1Q9H342 316 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 CST9LQ9H4G1 147 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 Q9H521 79 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 SLC17A5Q9NRA2 495 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 SCN3BQ9NY72 215 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 SLC25A37Q9NYZ2 338 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 SS18L2Q9UHA2 77 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 HSPB8Q9UJY1 196 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 MCTS1Q9ULC4 181 aaKnown RBP2.97□□□□□ -1.93
PRPF39-209ENST00000556353 RCL1Q9Y2P8 373 aaKnown RBP2.97□□□□□ -1.93
PRPF39-209ENST00000556353 KLHDC2Q9Y2U9 406 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 EXOSC1Q9Y3B2 195 aaKnown RBP2.97□□□□□ -1.93
PRPF39-209ENST00000556353 LSM5Q9Y4Y9 91 aaKnown RBP2.97□□□□□ -1.93
PRPF39-209ENST00000556353 TENM3Q9P273 2699 aa2.97□□□□□ -1.93
PRPF39-209ENST00000556353 DYNC2H1Q8NCM8 4307 aaKnown RBP2.96□□□□□ -1.94
PRPF39-209ENST00000556353 STAB2Q8WWQ8 2551 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 A0A087WX48 190 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 TMEM72A0PK05 275 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 OR5H1A6NKK0 313 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 E7EQL1 145 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 G3V4G9 280 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 CCL25O15444 150 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 CD5LO43866 347 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 SEMG1P04279 462 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 FGF7P21781 194 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 CD34P28906 385 aa2.96□□□□□ -1.94
PRPF39-209ENST00000556353 RPL12P30050 165 aaKnown RBP2.96□□□□□ -1.94
PRPF39-209ENST00000556353 GLP1RP43220 463 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms