RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 A0A1W2PRV1 198 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 C9JQL5 133 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 GEMIN2O14893 280 aaKnown RBP3.16□□□□□ -1.9
ATXN3-240ENST00000556339 NPFFO15130 113 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 HMGB3O15347 200 aaKnown RBP3.16□□□□□ -1.9
ATXN3-240ENST00000556339 ANGPTL7O43827 346 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 OR7C1O76099 320 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-240ENST00000556339 IFNA10P01566 189 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 IGKV1D-12P01611 117 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 OPN1MWP04001 364 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 FABP1P07148 127 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 SNRNP70P08621 437 aaKnown RBP3.16□□□□□ -1.9
ATXN3-240ENST00000556339 SRP19P09132 144 aaKnown RBP3.16□□□□□ -1.9
ATXN3-240ENST00000556339 OPN1MW2P0DN77 364 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 OPN1MW3P0DN78 364 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 AADACP22760 399 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 F2RP25116 425 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 NFYBP25208 207 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 ATP6V0CP27449 155 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 S100A2P29034 98 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 GLIPR1P48060 266 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 RND2P52198 227 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 SNRPEP62304 92 aaKnown RBP3.16□□□□□ -1.9
ATXN3-240ENST00000556339 HLA-DRB3P79483 266 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 PRB3Q04118 309 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-240ENST00000556339 PRDX4Q13162 271 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 LY6EQ16553 131 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 MRGPRG-AS1Q2M3A8 158 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 LBHQ53QV2 105 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-240ENST00000556339 PLCXD3Q63HM9 321 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 RNF144BQ7Z419 303 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 TBC1D26Q86UD7 250 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 FOXRED2Q8IWF2 684 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 ZDHHC23Q8IYP9 409 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 GCSAMQ8N6F7 178 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 FAM216BQ8N7L0 139 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 SLC35G3Q8N808 338 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 OR5D18Q8NGL1 313 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 OR5R1Q8NH85 324 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 LINC01006Q8NI28 216 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 FAM213BQ8TBF2 198 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 SCGB1C1Q8TD33 95 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 CD300LFQ8TDQ1 290 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 NPIPB3Q92617 1050 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 TOMM40LQ969M1 308 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 TXNDC17Q9BRA2 123 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 AGMATQ9BSE5 352 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 CABLES2Q9BTV7 478 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 TOLLIPQ9H0E2 274 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 SIRPDQ9H106 197 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 TMEM231Q9H6L2 316 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 WFDC1Q9HC57 220 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 KAAG1Q9UBP8 84 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 CTSZQ9UBR2 303 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 SLC25A10Q9UBX3 287 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-240ENST00000556339 OR2W1Q9Y3N9 320 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 VWFP04275 2813 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 TRRAPQ9Y4A5 3859 aa3.15□□□□□ -1.9
ATXN3-240ENST00000556339 TRBV24-1A0A075B6N3 115 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 IGKV1-27A0A075B6S5 117 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 A0A1B0GWJ7 208 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 C5orf63A6NC05 138 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 PCP4L1A6NKN8 68 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 TMEM210A6NLX4 147 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 ZNF729A6NN14 1252 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-240ENST00000556339 TMEM250H0YL14 139 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 H3BQ15 152 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 H3BUX3 64 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-240ENST00000556339 HSD17B6O14756 317 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 AGPAT2O15120 278 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 TXNL1O43396 289 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 CHST1O43916 411 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 PGLYRP1O75594 196 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-240ENST00000556339 LHBP01229 141 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 SERPINE2P07093 398 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 GPM6AP51674 278 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 UBE2E1P51965 193 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 DLX1P56177 255 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 FXYD4P59646 89 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 UBE2KP61086 200 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 RPL15P61313 204 aaKnown RBP3.15□□□□□ -1.91
ATXN3-240ENST00000556339 GNG3P63215 75 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 FABP9Q0Z7S8 132 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 KLRD1Q13241 179 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 NSUN5P1Q3KNT7 163 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 SP6Q3SY56 376 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 PHLDA2Q53GA4 152 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 KRBOX4Q5JUW0 171 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 SPIN3Q5JUX0 258 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 TEX36Q5VZQ5 186 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 NCR3LG1Q68D85 454 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 SLC35E4Q6ICL7 350 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 WDR82Q6UXN9 313 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 TMEM182Q6ZP80 229 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-240ENST00000556339 C1orf122Q6ZSJ8 110 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 Q6ZSV7 163 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 SLC25A26Q70HW3 274 aa3.15□□□□□ -1.91
ATXN3-240ENST00000556339 ZNF429Q86V71 674 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms