RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 TRAM1Q15629 374 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 TNXAQ16473 311 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 MRGPRG-AS1Q2M3A8 158 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 VMA21Q3ZAQ7 101 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 CCDC58Q4VC31 144 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 HSD17B12Q53GQ0 312 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 PVRIGQ6DKI7 326 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 CLEC19AQ6UXS0 136 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 MOB1BQ7L9L4 216 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 JAGN1Q8N5M9 183 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-239ENST00000556315 OR13C5Q8NGS8 318 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 OR6F1Q8NGZ6 308 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 OR5B3Q8NH48 314 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 THAP6Q8TBB0 222 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 ACOT12Q8WYK0 555 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 SLC25A46Q96AG3 418 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 GRAMD2BQ96HH9 432 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 FAAP24Q9BTP7 215 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 RNF126Q9BV68 326 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 CHMP1AQ9HD42 196 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-239ENST00000556315 SCRT2Q9NQ03 307 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 CKLFQ9UBR5 152 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 GHRLQ9UBU3 117 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 MGAT4AQ9UM21 535 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 ZNF257Q9Y2Q1 563 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 LSM2Q9Y333 95 aaKnown RBP3.5□□□□□ -1.85
ATXN3-239ENST00000556315 UFC1Q9Y3C8 167 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 HERC1Q15751 4861 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 HSPG2P98160 4391 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 TRBV6-6A0A0A6YYG2 114 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 TRBV7-1A0A0A6YYK4 115 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 LOC100506127A0A0U1RQW1 187 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 TRDV1A0A1B0GX56 115 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 PRSS47A8MTI9 375 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 C16orf90A8MZG2 172 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 DEFB4AO15263 64 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 CREBL2O60519 120 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-239ENST00000556315 DHFRP00374 187 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 IFNA10P01566 189 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 HIST1H1BP16401 226 aaKnown RBP3.49□□□□□ -1.85
ATXN3-239ENST00000556315 HLA-DMBP28068 263 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 WNT4P56705 351 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 TMEM187Q14656 261 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 CDK10Q15131 360 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 RTL8BQ17RB0 113 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 KLK9Q2XQG4 91 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 ZFP69Q49AA0 526 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 THOC7Q6I9Y2 204 aaKnown RBP3.49□□□□□ -1.85
ATXN3-239ENST00000556315 UNQ9165/PRO28630Q6UXU0 137 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 Q6ZR54 194 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 MMD2Q8IY49 270 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 TCTE3Q8IZS6 198 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 DUSP18Q8NEJ0 188 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 CD300LFQ8TDQ1 290 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 EEF1AKMT3Q96AZ1 226 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 SAT2Q96F10 170 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-239ENST00000556315 CYYR1Q96J86 154 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 SOSTQ9BQB4 213 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 CENPOQ9BU64 300 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 SRRQ9GZT4 340 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 OR51E2Q9H255 320 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 OR1A1Q9P1Q5 309 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 KLK9Q9UKQ9 250 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 PKHD1P08F94 4074 aa3.49□□□□□ -1.85
ATXN3-239ENST00000556315 DNAH6Q9C0G6 4158 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 TRAV8-7A0A075B6U6 113 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 TRBV5-5A0A0J9YX44 114 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 FABP12A6NFH5 140 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 S1PR2O95136 353 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 IFNA21P01568 189 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 IFNA17P01571 189 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 IGHV3-23P01764 117 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 CRYGCP07315 174 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 UBBP0CG47 229 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 HSMCR30P0CW71 290 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 IL7P13232 177 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 SSX1Q16384 188 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 IZUMO4Q1ZYL8 232 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 Q499Y3 187 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 YIF1BQ5BJH7 314 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 C1orf134Q5TEV5 83 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 PLET1Q6UQ28 207 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 ZNF767PQ75MW2 155 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 C6orf201Q7Z4U5 140 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 TPRA1Q86W33 373 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 APRG1Q8IVJ8 170 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 PHYHIPQ92561 330 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 UFD1Q92890 307 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 ADTRPQ96IZ2 230 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 ST6GAL2Q96JF0 529 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 CXorf58Q96LI9 332 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 SDHCQ99643 169 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-239ENST00000556315 C7orf50Q9BRJ6 194 aaKnown RBP3.48□□□□□ -1.85
ATXN3-239ENST00000556315 UQCC2Q9BRT2 126 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 NDUFAF3Q9BU61 184 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 ZNF430Q9H8G1 570 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-239ENST00000556315 Q9N2K0 584 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 SLC2A9Q9NRM0 540 aa3.48□□□□□ -1.85
ATXN3-239ENST00000556315 PLEKHJ1Q9NW61 149 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms