RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 Q56UQ5 140 aa11.54□□□□□ -0.56
ACTN1-217ENST00000556203 TMEM128Q5BJH2 165 aa11.54□□□□□ -0.56
ACTN1-217ENST00000556203 ADAMTSL5Q6ZMM2 481 aa11.54□□□□□ -0.56
ACTN1-217ENST00000556203 OR52E5Q8NH55 327 aa11.54□□□□□ -0.56
ACTN1-217ENST00000556203 PINX1Q96BK5 328 aaKnown RBP11.54□□□□□ -0.56
ACTN1-217ENST00000556203 BSCL2Q96G97 398 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-217ENST00000556203 A0A0B4J2A0 478 aa11.53□□□□□ -0.56
ACTN1-217ENST00000556203 A6NHS1 94 aa11.53□□□□□ -0.56
ACTN1-217ENST00000556203 F8W735 103 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-217ENST00000556203 FOLR2P14207 255 aa11.53□□□□□ -0.56
ACTN1-217ENST00000556203 UNQ9165/PRO28630Q6UXU0 137 aa11.53□□□□□ -0.56
ACTN1-217ENST00000556203 LYZL2Q7Z4W2 148 aa11.53□□□□□ -0.56
ACTN1-217ENST00000556203 CENPSQ8N2Z9 138 aa11.53□□□□□ -0.56
ACTN1-217ENST00000556203 DYNLRB2Q8TF09 96 aa11.53□□□□□ -0.56
ACTN1-217ENST00000556203 ATP6V0BQ99437 205 aa11.53□□□□□ -0.56
ACTN1-217ENST00000556203 SHPKQ9UHJ6 478 aa11.53□□□□□ -0.56
ACTN1-217ENST00000556203 TMEM213A2RRL7 107 aa11.52□□□□□ -0.57
ACTN1-217ENST00000556203 NXPH3O95157 252 aa11.52□□□□□ -0.57
ACTN1-217ENST00000556203 SFT2D2O95562 160 aa11.52□□□□□ -0.57
ACTN1-217ENST00000556203 IGHV3-48P01763 117 aa11.52□□□□□ -0.57
ACTN1-217ENST00000556203 SULT1A3P0DMM9 295 aa11.52□□□□□ -0.57
ACTN1-217ENST00000556203 SULT1A4P0DMN0 295 aa11.52□□□□□ -0.57
ACTN1-217ENST00000556203 RNASE2P10153 161 aaKnown RBP11.52□□□□□ -0.57
ACTN1-217ENST00000556203 SUB1P53999 127 aaKnown RBP eCLIP11.52□□□□□ -0.57
ACTN1-217ENST00000556203 PPP1R1AQ13522 171 aa11.52□□□□□ -0.57
ACTN1-217ENST00000556203 CNPY1Q3B7I2 92 aa11.52□□□□□ -0.57
ACTN1-217ENST00000556203 NMSQ5H8A3 153 aa11.52□□□□□ -0.57
ACTN1-217ENST00000556203 LCN12Q6JVE5 192 aa11.52□□□□□ -0.57
ACTN1-217ENST00000556203 SPSB3Q6PJ21 355 aa11.52□□□□□ -0.57
ACTN1-217ENST00000556203 CACNG8Q8WXS5 425 aa11.52□□□□□ -0.57
ACTN1-217ENST00000556203 ZNF436Q9C0F3 470 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-217ENST00000556203 CENPXA8MT69 81 aa11.51□□□□□ -0.57
ACTN1-217ENST00000556203 CEBPZOSA8MTT3 80 aa11.51□□□□□ -0.57
ACTN1-217ENST00000556203 A8MWP6 167 aa11.51□□□□□ -0.57
ACTN1-217ENST00000556203 NDUFB6O95139 128 aa11.51□□□□□ -0.57
ACTN1-217ENST00000556203 CBLN1P23435 193 aa11.51□□□□□ -0.57
ACTN1-217ENST00000556203 MFAP4P55083 255 aa11.51□□□□□ -0.57
ACTN1-217ENST00000556203 CD69Q07108 199 aa11.51□□□□□ -0.57
ACTN1-217ENST00000556203 SMCO1Q147U7 214 aa11.51□□□□□ -0.57
ACTN1-217ENST00000556203 ANKRD55Q3KP44 614 aa11.51□□□□□ -0.57
ACTN1-217ENST00000556203 CD300EQ496F6 205 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-217ENST00000556203 TM4SF20Q53R12 229 aa11.51□□□□□ -0.57
ACTN1-217ENST00000556203 B9D2Q9BPU9 175 aa11.51□□□□□ -0.57
ACTN1-217ENST00000556203 C7orf50Q9BRJ6 194 aaKnown RBP11.51□□□□□ -0.57
ACTN1-217ENST00000556203 CHRDL1Q9BU40 450 aa11.51□□□□□ -0.57
ACTN1-217ENST00000556203 PALMDQ9NP74 551 aa11.51□□□□□ -0.57
ACTN1-217ENST00000556203 GAR1Q9NY12 217 aaKnown RBP11.51□□□□□ -0.57
ACTN1-217ENST00000556203 SMAD5-AS1Q9Y6J3 95 aa11.51□□□□□ -0.57
ACTN1-217ENST00000556203 PIGBOS1A0A0B4J2F0 54 aa11.5□□□□□ -0.57
ACTN1-217ENST00000556203 IZUMO1RA6ND01 250 aa11.5□□□□□ -0.57
ACTN1-217ENST00000556203 CORTO00230 105 aa11.5□□□□□ -0.57
ACTN1-217ENST00000556203 NUPL2O15504 423 aaKnown RBP11.5□□□□□ -0.57
ACTN1-217ENST00000556203 BTCP35070 178 aa11.5□□□□□ -0.57
ACTN1-217ENST00000556203 ADMP35318 185 aa11.5□□□□□ -0.57
ACTN1-217ENST00000556203 DEFB114Q30KQ6 69 aa11.5□□□□□ -0.57
ACTN1-217ENST00000556203 PVRIGQ6DKI7 326 aa11.5□□□□□ -0.57
ACTN1-217ENST00000556203 OR2K2Q8NGT1 345 aa11.5□□□□□ -0.57
ACTN1-217ENST00000556203 TMEM190Q8WZ59 177 aa11.5□□□□□ -0.57
ACTN1-217ENST00000556203 TXN2Q99757 166 aa11.5□□□□□ -0.57
ACTN1-217ENST00000556203 CACFD1Q9UGQ2 172 aa11.5□□□□□ -0.57
ACTN1-217ENST00000556203 FLVCR2Q9UPI3 526 aa11.5□□□□□ -0.57
ACTN1-217ENST00000556203 UFC1Q9Y3C8 167 aa11.5□□□□□ -0.57
ACTN1-217ENST00000556203 SELENOKQ9Y6D0 94 aa11.5□□□□□ -0.57
ACTN1-217ENST00000556203 DUXBA0A1W2PPF3 345 aa11.49□□□□□ -0.57
ACTN1-217ENST00000556203 NDUFA4O00483 81 aa11.49□□□□□ -0.57
ACTN1-217ENST00000556203 CTSGP08311 255 aa11.49□□□□□ -0.57
ACTN1-217ENST00000556203 FCGR2BP31994 310 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-217ENST00000556203 HTR2BP41595 481 aa11.49□□□□□ -0.57
ACTN1-217ENST00000556203 BSXQ3C1V8 233 aa11.49□□□□□ -0.57
ACTN1-217ENST00000556203 C11orf87Q6NUJ2 197 aa11.49□□□□□ -0.57
ACTN1-217ENST00000556203 LRTM2Q8N967 370 aa11.49□□□□□ -0.57
ACTN1-217ENST00000556203 UXS1Q8NBZ7 420 aa11.49□□□□□ -0.57
ACTN1-217ENST00000556203 DUSP18Q8NEJ0 188 aa11.49□□□□□ -0.57
ACTN1-217ENST00000556203 HEYLQ9NQ87 328 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-217ENST00000556203 TECRQ9NZ01 308 aaKnown RBP11.49□□□□□ -0.57
ACTN1-217ENST00000556203 A0A1B0GU03 582 aa11.48□□□□□ -0.57
ACTN1-217ENST00000556203 PLA2G10O15496 165 aa11.48□□□□□ -0.57
ACTN1-217ENST00000556203 GNG7O60262 68 aa11.48□□□□□ -0.57
ACTN1-217ENST00000556203 OPRK1P41145 380 aa11.48□□□□□ -0.57
ACTN1-217ENST00000556203 ELLP55199 621 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-217ENST00000556203 UBE2MP61081 183 aaKnown RBP11.48□□□□□ -0.57
ACTN1-217ENST00000556203 RELQ04864 619 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-217ENST00000556203 TNFRSF9Q07011 255 aa11.48□□□□□ -0.57
ACTN1-217ENST00000556203 LINC00299Q6ZSB3 139 aa11.48□□□□□ -0.57
ACTN1-217ENST00000556203 SLC24A4Q8NFF2 622 aa11.48□□□□□ -0.57
ACTN1-217ENST00000556203 OR1S1Q8NH92 325 aa11.48□□□□□ -0.57
ACTN1-217ENST00000556203 MARC2Q969Z3 335 aa11.48□□□□□ -0.57
ACTN1-217ENST00000556203 C20orf24Q9BUV8 137 aa11.48□□□□□ -0.57
ACTN1-217ENST00000556203 CCDC32Q9BV29 185 aa11.48□□□□□ -0.57
ACTN1-217ENST00000556203 HIPK2Q9H2X6 1198 aa11.48□□□□□ -0.57
ACTN1-217ENST00000556203 MLXQ9UH92 298 aa11.48□□□□□ -0.57
ACTN1-217ENST00000556203 IGHV3OR16-8A0A075B7F1 116 aa11.47□□□□□ -0.57
ACTN1-217ENST00000556203 C9orf170A2RU37 121 aa11.47□□□□□ -0.57
ACTN1-217ENST00000556203 LYRM1O43325 122 aa11.47□□□□□ -0.57
ACTN1-217ENST00000556203 C8orf88P0DMB2 117 aa11.47□□□□□ -0.57
ACTN1-217ENST00000556203 ANXA7P20073 488 aaKnown RBP11.47□□□□□ -0.57
ACTN1-217ENST00000556203 NPBWR1P48145 328 aa11.47□□□□□ -0.57
ACTN1-217ENST00000556203 MLANAQ16655 118 aa11.47□□□□□ -0.57
ACTN1-217ENST00000556203 BTNL8Q6UX41 500 aa11.47□□□□□ -0.57
ACTN1-217ENST00000556203 GTSCR1Q86UQ5 136 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms