RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 ANKRD34BA5PLL1 514 aa10.94□□□□□ -0.66
SNX6-206ENST00000556162 WRBO00258 174 aa10.94□□□□□ -0.66
SNX6-206ENST00000556162 IFNA10P01566 189 aa10.94□□□□□ -0.66
SNX6-206ENST00000556162 HSPB1P04792 205 aaKnown RBP10.94□□□□□ -0.66
SNX6-206ENST00000556162 BSXQ3C1V8 233 aa10.94□□□□□ -0.66
SNX6-206ENST00000556162 FAM209BQ5JX69 171 aa10.94□□□□□ -0.66
SNX6-206ENST00000556162 PRR31Q5SQ13 230 aa10.94□□□□□ -0.66
SNX6-206ENST00000556162 NOXA1Q86UR1 476 aa10.94□□□□□ -0.66
SNX6-206ENST00000556162 SLC24A4Q8NFF2 622 aa10.94□□□□□ -0.66
SNX6-206ENST00000556162 VN1R17PQ8TDU5 208 aa10.94□□□□□ -0.66
SNX6-206ENST00000556162 C2orf50Q96LR7 162 aa10.94□□□□□ -0.66
SNX6-206ENST00000556162 CIB3Q96Q77 187 aaPredicted RBP10.94□□□□□ -0.66
SNX6-206ENST00000556162 RANGRFQ9HD47 186 aaPredicted RBP10.94□□□□□ -0.66
SNX6-206ENST00000556162 PEF1Q9UBV8 284 aaKnown RBP10.94□□□□□ -0.66
SNX6-206ENST00000556162 CORTO00230 105 aa10.93□□□□□ -0.66
SNX6-206ENST00000556162 LY86O95711 162 aa10.93□□□□□ -0.66
SNX6-206ENST00000556162 SCGB1D2O95969 90 aa10.93□□□□□ -0.66
SNX6-206ENST00000556162 ZNF616Q08AN1 781 aa10.93□□□□□ -0.66
SNX6-206ENST00000556162 C2orf83Q53S99 150 aa10.93□□□□□ -0.66
SNX6-206ENST00000556162 PINX1Q96BK5 328 aaKnown RBP10.93□□□□□ -0.66
SNX6-206ENST00000556162 ALG5Q9Y673 324 aa10.93□□□□□ -0.66
SNX6-206ENST00000556162 WNK1Q9H4A3 2382 aa10.93□□□□□ -0.66
SNX6-206ENST00000556162 TRBV7-1A0A0A6YYK4 115 aa10.93□□□□□ -0.66
SNX6-206ENST00000556162 MFSD2BA6NFX1 497 aa10.93□□□□□ -0.66
SNX6-206ENST00000556162 LINC01619G3V211 115 aa10.93□□□□□ -0.66
SNX6-206ENST00000556162 GOSR2O14653 212 aa10.93□□□□□ -0.66
SNX6-206ENST00000556162 IGHV3-23P01764 117 aa10.93□□□□□ -0.66
SNX6-206ENST00000556162 IAPPP10997 89 aa10.93□□□□□ -0.66
SNX6-206ENST00000556162 ATP5IP56385 69 aaPredicted RBP10.93□□□□□ -0.66
SNX6-206ENST00000556162 POLR2GP62487 172 aaKnown RBP eCLIP10.93□□□□□ -0.66
SNX6-206ENST00000556162 ETV3LQ6ZN32 361 aa10.93□□□□□ -0.66
SNX6-206ENST00000556162 SCARB1Q8WTV0 552 aa10.93□□□□□ -0.66
SNX6-206ENST00000556162 S4R3C0 116 aa10.93□□□□□ -0.66
SNX6-206ENST00000556162 CMYA5Q8N3K9 4069 aa10.93□□□□□ -0.66
SNX6-206ENST00000556162 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.92□□□□□ -0.66
SNX6-206ENST00000556162 IGHV3-21A0A0B4J1V1 117 aa10.92□□□□□ -0.66
SNX6-206ENST00000556162 NPY1RP25929 384 aa10.92□□□□□ -0.66
SNX6-206ENST00000556162 RPP30P78346 268 aaKnown RBP10.92□□□□□ -0.66
SNX6-206ENST00000556162 PVRIGQ6DKI7 326 aa10.92□□□□□ -0.66
SNX6-206ENST00000556162 C11orf87Q6NUJ2 197 aa10.92□□□□□ -0.66
SNX6-206ENST00000556162 IGHV4OR15-8A0A075B7B6 117 aa10.91□□□□□ -0.66
SNX6-206ENST00000556162 A0A087WW49 117 aa10.91□□□□□ -0.66
SNX6-206ENST00000556162 I3L2K1 104 aa10.91□□□□□ -0.66
SNX6-206ENST00000556162 K7EIM0 57 aa10.91□□□□□ -0.66
SNX6-206ENST00000556162 MT-CO2P00403 227 aa10.91□□□□□ -0.66
SNX6-206ENST00000556162 CLEC3BP05452 202 aa10.91□□□□□ -0.66
SNX6-206ENST00000556162 OR8U8P0C7N1 319 aa10.91□□□□□ -0.66
SNX6-206ENST00000556162 FHL3Q13643 280 aa10.91□□□□□ -0.66
SNX6-206ENST00000556162 TREML4Q6UXN2 200 aa10.91□□□□□ -0.66
SNX6-206ENST00000556162 CLEC19AQ6UXS0 136 aa10.91□□□□□ -0.66
SNX6-206ENST00000556162 ZNF502Q8TBZ5 544 aa10.91□□□□□ -0.66
SNX6-206ENST00000556162 C21orf62Q9NYP8 219 aa10.91□□□□□ -0.66
SNX6-206ENST00000556162 PKD1L1Q8TDX9 2849 aa10.91□□□□□ -0.66
SNX6-206ENST00000556162 SSSCA1O60232 199 aa10.91□□□□□ -0.66
SNX6-206ENST00000556162 SIX6O95475 246 aa10.91□□□□□ -0.66
SNX6-206ENST00000556162 MBPP02686 304 aaPredicted RBP10.91□□□□□ -0.66
SNX6-206ENST00000556162 RNASEH2CQ8TDP1 164 aaKnown RBP10.91□□□□□ -0.66
SNX6-206ENST00000556162 TRBV12-3P01733 135 aa10.9□□□□□ -0.66
SNX6-206ENST00000556162 IFNA4P05014 189 aa10.9□□□□□ -0.66
SNX6-206ENST00000556162 ZP3P21754 424 aa10.9□□□□□ -0.66
SNX6-206ENST00000556162 OPRK1P41145 380 aa10.9□□□□□ -0.66
SNX6-206ENST00000556162 MFAP4P55083 255 aa10.9□□□□□ -0.66
SNX6-206ENST00000556162 RAB11AP62491 216 aa10.9□□□□□ -0.66
SNX6-206ENST00000556162 CYCSP99999 105 aaKnown RBP10.9□□□□□ -0.66
SNX6-206ENST00000556162 LINC00482Q8N8I6 264 aa10.9□□□□□ -0.66
SNX6-206ENST00000556162 TMEM170AQ8WVE7 144 aa10.9□□□□□ -0.66
SNX6-206ENST00000556162 CCDC140Q96MF4 163 aa10.9□□□□□ -0.66
SNX6-206ENST00000556162 RAB40CQ96S21 281 aa10.9□□□□□ -0.66
SNX6-206ENST00000556162 MGAT4CQ9UBM8 478 aa10.9□□□□□ -0.66
SNX6-206ENST00000556162 PAIP2BQ9ULR5 123 aaKnown RBP10.9□□□□□ -0.66
SNX6-206ENST00000556162 RPS10-NUDT3A0A1W2PQS6 291 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 CD33P20138 364 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 SPANXN5Q5MJ07 72 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 UBAC2Q8NBM4 344 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 SMIM8Q96KF7 97 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 ATP6V0BQ99437 205 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 MED28Q9H204 178 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 GAR1Q9NY12 217 aaKnown RBP10.89□□□□□ -0.67
SNX6-206ENST00000556162 PSENENQ9NZ42 101 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 LSM5Q9Y4Y9 91 aaKnown RBP10.89□□□□□ -0.67
SNX6-206ENST00000556162 PPP5D1E7EU14 171 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 GGCTO75223 188 aaKnown RBP10.89□□□□□ -0.67
SNX6-206ENST00000556162 IGHV3-48P01763 117 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 HOXD3P31249 432 aaPredicted RBP10.89□□□□□ -0.67
SNX6-206ENST00000556162 GPR183P32249 361 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 ARL3P36405 182 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 SLURP1P55000 103 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 IL15RAQ13261 267 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 RPEL1Q2QD12 228 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 Q56UQ5 140 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 WFDC9Q8NEX5 89 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 TXN2Q99757 166 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 NMES1Q9C002 83 aa10.89□□□□□ -0.67
SNX6-206ENST00000556162 STRAPQ9Y3F4 350 aaKnown RBP10.89□□□□□ -0.67
SNX6-206ENST00000556162 OR2T8A6NH00 312 aa10.88□□□□□ -0.67
SNX6-206ENST00000556162 C15orf62A8K5M9 175 aa10.88□□□□□ -0.67
SNX6-206ENST00000556162 H3BP45 60 aa10.88□□□□□ -0.67
SNX6-206ENST00000556162 K7EPK0 472 aa10.88□□□□□ -0.67
SNX6-206ENST00000556162 L7N2F9 121 aa10.88□□□□□ -0.67
SNX6-206ENST00000556162 BMPR1BO00238 502 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms