RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 AKR1C8PQ5T2L2 129 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 OR8G2PQ6IF36 304 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 DPPA3Q6W0C5 159 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 Q6ZRG5 221 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 VKORC1L1Q8N0U8 176 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 COMMD1Q8N668 190 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 ZNF525Q8N782 197 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 C11orf44Q8N8P7 122 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 OR4C13Q8NGP0 309 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 OR4A5Q8NH83 315 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 VSTM2AQ8TAG5 236 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 ST6GALNAC6Q969X2 333 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 OR4C12Q96R67 309 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 NABP2Q9BQ15 211 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 TMEM147Q9BVK8 224 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 BET1LQ9NYM9 111 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 TCF19Q9Y242 345 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 FOXA2Q9Y261 457 aaPredicted RBP5.49□□□□□ -1.53
SLIRP-204ENST00000555890 OR51B2Q9Y5P1 312 aa5.49□□□□□ -1.53
SLIRP-204ENST00000555890 A8MXK9 166 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 F5H697 171 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 BUB1B-PAK6H3BSN5 160 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 OVOL3O00110 214 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 ENSAO43768 121 aaKnown RBP5.48□□□□□ -1.53
SLIRP-204ENST00000555890 IGLV1-47P01700 117 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 ZP3P21754 424 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 USF1P22415 310 aaPredicted RBP5.48□□□□□ -1.53
SLIRP-204ENST00000555890 COX7A1P24310 79 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 REG1BP48304 166 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 PCP4P48539 62 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 ZNF616Q08AN1 781 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 HLA-DRB5Q30154 266 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 VMA21Q3ZAQ7 101 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 SPINK9Q5DT21 86 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 PXDC1Q5TGL8 231 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 FAM90A2PQ658T7 463 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 BTNL8Q6UX41 500 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 TMEM182Q6ZP80 229 aaPredicted RBP5.48□□□□□ -1.53
SLIRP-204ENST00000555890 PUSL1Q8N0Z8 303 aaKnown RBP5.48□□□□□ -1.53
SLIRP-204ENST00000555890 KIR3DL3Q8N743 410 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 ZNF709Q8N972 641 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 OR5B3Q8NH48 314 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 HARBI1Q96MB7 349 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 PSMG3Q9BT73 122 aaPredicted RBP5.48□□□□□ -1.53
SLIRP-204ENST00000555890 GGACTQ9BVM4 153 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 COMMD5Q9GZQ3 224 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 SH3BGRL3Q9H299 93 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 HRH4Q9H3N8 390 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 NARFLQ9H6Q4 476 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 PLEKHA3Q9HB20 300 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 TMEM14BQ9NUH8 114 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 UQCC1Q9NVA1 299 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 ZNRD1Q9P1U0 126 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 TIMM9Q9Y5J7 89 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 INSIG2Q9Y5U4 225 aa5.48□□□□□ -1.53
SLIRP-204ENST00000555890 TRAV3A0A0B4J244 114 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 TEX50A0A1B0GTY4 177 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 TMEM89A2RUT3 159 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 BTBD17A6NE02 478 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 GAGE10A6NGK3 116 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 SH2D7A6NKC9 451 aaPredicted RBP5.47□□□□□ -1.53
SLIRP-204ENST00000555890 C17orf112F2Z3M2 114 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 SOX15O60248 233 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 FOXH1O75593 365 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 HBE1P02100 147 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 IGKV1-16P04430 117 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 IFNA4P05014 189 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 IL6RP08887 468 aaPredicted RBP5.47□□□□□ -1.53
SLIRP-204ENST00000555890 SAA1P0DJI8 122 aaPredicted RBP5.47□□□□□ -1.53
SLIRP-204ENST00000555890 PRTN3P24158 256 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 HTR1DP28221 377 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 VDAC2P45880 294 aaPredicted RBP5.47□□□□□ -1.53
SLIRP-204ENST00000555890 FAM3BP58499 235 aaPredicted RBP5.47□□□□□ -1.53
SLIRP-204ENST00000555890 ARF6P62330 175 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 SERF2P84101 59 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 PRCDQ00LT1 54 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 ARL16Q0P5N6 197 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 MLANAQ16655 118 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 MOB3BQ86TA1 216 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 HAPLN4Q86UW8 402 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 PNKDQ8N490 385 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 LFNGQ8NES3 379 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 OR11H6Q8NGC7 330 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 OR1L8Q8NGR8 309 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 LYPD6BQ8NI32 183 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 FAM213BQ8TBF2 198 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 TMEM167AQ8TBQ9 72 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 RPEQ96AT9 228 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 NEU1Q99519 415 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 CCL19Q99731 98 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 RNF5Q99942 180 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 ZNF747Q9BV97 191 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 HINT2Q9BX68 163 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 WDR61Q9GZS3 305 aaKnown RBP5.47□□□□□ -1.53
SLIRP-204ENST00000555890 TREM1Q9NP99 234 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 DPM3Q9P2X0 92 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 FBXO7Q9Y3I1 522 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 KPTNQ9Y664 436 aa5.47□□□□□ -1.53
SLIRP-204ENST00000555890 A0A096LNT2 108 aa5.46□□□□□ -1.54
SLIRP-204ENST00000555890 IGHV1-3A0A0C4DH29 117 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms