RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ITGBL1O95965 494 aaPredicted RBP5.84□□□□□ -1.48
SYNE2-216ENST00000555002 EFEMP2O95967 443 aa5.84□□□□□ -1.48
SYNE2-216ENST00000555002 CD300CQ08708 224 aa5.84□□□□□ -1.48
SYNE2-216ENST00000555002 FAM27BQ5VT28 67 aa5.84□□□□□ -1.48
SYNE2-216ENST00000555002 Q9H3A6 140 aa5.84□□□□□ -1.48
SYNE2-216ENST00000555002 CLDN16Q9Y5I7 305 aa5.84□□□□□ -1.48
SYNE2-216ENST00000555002 LINC01465Q8N7H1 131 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 PARP14Q460N5 1801 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 NDUFS5O43920 106 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 DDTP30046 118 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 CD300LDQ6UXZ3 194 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 DLL3Q9NYJ7 618 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 TRGV11A0A075B6L2 103 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 MYOD1P15172 320 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 ATXN8Q156A1 80 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 TMEM54Q969K7 222 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 IGLV3-16A0A075B6K0 115 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 A0A1B0GUT8 65 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 PLNP26678 52 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 DMRTA1Q5VZB9 504 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 PRSS22Q9GZN4 317 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 LHFPL4Q7Z7J7 247 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 FDCSPQ8NFU4 85 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 NHP2Q9NX24 153 aaKnown RBP5.83□□□□□ -1.48
SYNE2-216ENST00000555002 TTC28Q96AY4 2481 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 PGPEP1LA6NFU8 196 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 FNDC4Q9H6D8 234 aaPredicted RBP5.83□□□□□ -1.48
SYNE2-216ENST00000555002 TRBV9A0A0B4J1U6 114 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 KBTBD11-OT1A0A1B0GTJ5 212 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 APOBEC3AP31941 199 aaPredicted RBP5.83□□□□□ -1.48
SYNE2-216ENST00000555002 RAG2P55895 527 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 LY6DQ14210 128 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 SMRP1Q8NCR6 262 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 NEUROG1Q92886 237 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 NABP2Q9BQ15 211 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 ZNF257Q9Y2Q1 563 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 IGKV1D-16P01601 117 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 TMEM219Q86XT9 240 aa5.83□□□□□ -1.48
SYNE2-216ENST00000555002 FMC1Q96HJ9 113 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 MEGF9Q9H1U4 602 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 DLEC1Q9Y238 1755 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 SHANK3Q9BYB0 1731 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 PPIFP30405 207 aaKnown RBP5.82□□□□□ -1.48
SYNE2-216ENST00000555002 APCDD1LQ8NCL9 501 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 DPM3Q9P2X0 92 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 TAF1LQ8IZX4 1826 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 SCO2A0A1W2PP80 73 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 FAM216BQ8N7L0 139 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 SPSB2Q99619 263 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 FAM19A2Q8N3H0 131 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 IFI27L2Q9H2X8 130 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 CHTOPQ9Y3Y2 248 aaKnown RBP5.82□□□□□ -1.48
SYNE2-216ENST00000555002 PTP4A3O75365 173 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 CGAP01215 116 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 PRB1P04280 392 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 PRDM6Q9NQX0 595 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 LOC101059948A0A1B0GTJ6 334 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 ACP7Q6ZNF0 438 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 ITGB1BP1O14713 200 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 IMMP2LQ96T52 175 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 LGALS1P09382 135 aaKnown RBP5.82□□□□□ -1.48
SYNE2-216ENST00000555002 IGFBP2P18065 325 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 LOXL4Q96JB6 756 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 TMEM126AQ9H061 195 aa5.82□□□□□ -1.48
SYNE2-216ENST00000555002 CRYBA2P53672 197 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 JPT1Q9UK76 154 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 PILRBQ9UKJ0 227 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 CXorf51AA0A1B0GTR3 108 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 DPRXA6NFQ7 191 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 RBMY1FQ15415 496 aaKnown RBP5.81□□□□□ -1.48
SYNE2-216ENST00000555002 THAP8Q8NA92 274 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 TMEM52Q8NDY8 209 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 RHOGP84095 191 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 FUT5Q11128 374 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 ACTL10Q5JWF8 245 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 ORMDL3Q8N138 153 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 STPG2Q8N412 459 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 PEBP1P30086 187 aaKnown RBP5.81□□□□□ -1.48
SYNE2-216ENST00000555002 ERCC8Q13216 396 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 DTX1Q86Y01 620 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 PKIBQ9C010 78 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 GSN-AS1Q9NRJ2 163 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 ZNF474Q6S9Z5 364 aaPredicted RBP5.81□□□□□ -1.48
SYNE2-216ENST00000555002 SLC22A18ASQ8N1D0 253 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 SIRT4Q9Y6E7 314 aaPredicted RBP5.81□□□□□ -1.48
SYNE2-216ENST00000555002 GATA4P43694 442 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 SCN4AP35499 1836 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 H3BUT2 72 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 MORN3Q6PF18 240 aaPredicted RBP5.81□□□□□ -1.48
SYNE2-216ENST00000555002 SIGLEC12Q96PQ1 595 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 LINC00527Q9UJ94 153 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 CENPVL1A0A0U1RR11 272 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 GATA2P23769 480 aaPredicted RBP5.81□□□□□ -1.48
SYNE2-216ENST00000555002 NANOS3P60323 173 aaKnown RBP5.81□□□□□ -1.48
SYNE2-216ENST00000555002 C1QL2Q7Z5L3 287 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 TRAV14DV4A0A0A6YYC5 116 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 CTDSPLO15194 276 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 THBDP07204 575 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 NBEAP1P0C6P0 100 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 COX6A1P12074 109 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms