RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 TMEM189A5PLL7 270 aa12.89□□□□□ -0.35
SYNE3-203ENST00000554873 ANKRD30BLA7E2S9 258 aa12.89□□□□□ -0.35
SYNE3-203ENST00000554873 GNG3P63215 75 aa12.89□□□□□ -0.35
SYNE3-203ENST00000554873 TCTEX1D4Q5JR98 221 aa12.89□□□□□ -0.35
SYNE3-203ENST00000554873 GDF5OSQ5U4N7 250 aa12.89□□□□□ -0.35
SYNE3-203ENST00000554873 PMS2CLQ68D20 193 aa12.89□□□□□ -0.35
SYNE3-203ENST00000554873 GGTLC1Q9BX51 225 aa12.89□□□□□ -0.35
SYNE3-203ENST00000554873 SIT1Q9Y3P8 196 aa12.89□□□□□ -0.35
SYNE3-203ENST00000554873 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.89□□□□□ -0.35
SYNE3-203ENST00000554873 GAGE12HA6NDE8 117 aa12.89□□□□□ -0.35
SYNE3-203ENST00000554873 SH2D7A6NKC9 451 aaPredicted RBP12.89□□□□□ -0.35
SYNE3-203ENST00000554873 MFAP2P55001 183 aa12.89□□□□□ -0.35
SYNE3-203ENST00000554873 LINC00173Q6ZV60 143 aa12.89□□□□□ -0.35
SYNE3-203ENST00000554873 OR2V2Q96R30 315 aa12.89□□□□□ -0.35
SYNE3-203ENST00000554873 COLQQ9Y215 455 aaPredicted RBP12.89□□□□□ -0.35
SYNE3-203ENST00000554873 SERTM2A0A1B0GWG4 89 aa12.89□□□□□ -0.35
SYNE3-203ENST00000554873 TREML4Q6UXN2 200 aa12.89□□□□□ -0.35
SYNE3-203ENST00000554873 PERPQ96FX8 193 aa12.89□□□□□ -0.35
SYNE3-203ENST00000554873 MGST2Q99735 147 aa12.89□□□□□ -0.35
SYNE3-203ENST00000554873 IGHV1-24A0A0C4DH33 117 aa12.88□□□□□ -0.35
SYNE3-203ENST00000554873 PATE3B3GLJ2 98 aa12.88□□□□□ -0.35
SYNE3-203ENST00000554873 C21orf140B9A014 251 aa12.88□□□□□ -0.35
SYNE3-203ENST00000554873 FTH1P19P0C7X4 201 aa12.88□□□□□ -0.35
SYNE3-203ENST00000554873 CA6P23280 308 aa12.88□□□□□ -0.35
SYNE3-203ENST00000554873 SPINK9Q5DT21 86 aa12.88□□□□□ -0.35
SYNE3-203ENST00000554873 CHCHD1Q96BP2 118 aaKnown RBP12.88□□□□□ -0.35
SYNE3-203ENST00000554873 MPC1Q9Y5U8 109 aa12.88□□□□□ -0.35
SYNE3-203ENST00000554873 R4GN57 208 aa12.88□□□□□ -0.35
SYNE3-203ENST00000554873 FRYQ5TBA9 3013 aa12.88□□□□□ -0.35
SYNE3-203ENST00000554873 A0A1W2PPM0 123 aa12.88□□□□□ -0.35
SYNE3-203ENST00000554873 PPOXP50336 477 aa12.88□□□□□ -0.35
SYNE3-203ENST00000554873 MEF2CQ06413 473 aaPredicted RBP12.88□□□□□ -0.35
SYNE3-203ENST00000554873 RBMXL2O75526 392 aaKnown RBP12.87□□□□□ -0.35
SYNE3-203ENST00000554873 CA1P00915 261 aaPredicted RBP12.87□□□□□ -0.35
SYNE3-203ENST00000554873 IGLV2-8P01709 118 aa12.87□□□□□ -0.35
SYNE3-203ENST00000554873 ZNF816Q0VGE8 651 aaPredicted RBP12.87□□□□□ -0.35
SYNE3-203ENST00000554873 NAA38Q9BRA0 125 aaKnown RBP12.87□□□□□ -0.35
SYNE3-203ENST00000554873 MAP1LC3CQ9BXW4 147 aa12.87□□□□□ -0.35
SYNE3-203ENST00000554873 BOKQ9UMX3 212 aaPredicted RBP12.87□□□□□ -0.35
SYNE3-203ENST00000554873 TSSC4Q9Y5U2 329 aaPredicted RBP12.87□□□□□ -0.35
SYNE3-203ENST00000554873 PCSK5Q92824 1860 aa12.87□□□□□ -0.35
SYNE3-203ENST00000554873 FABP6P51161 128 aa12.87□□□□□ -0.35
SYNE3-203ENST00000554873 PLP2Q04941 152 aa12.87□□□□□ -0.35
SYNE3-203ENST00000554873 FOXE3Q13461 319 aa12.87□□□□□ -0.35
SYNE3-203ENST00000554873 KIR3DS1Q14943 382 aa12.87□□□□□ -0.35
SYNE3-203ENST00000554873 CCDC144NLQ6NUI1 221 aa12.87□□□□□ -0.35
SYNE3-203ENST00000554873 H1FXQ92522 213 aaKnown RBP12.87□□□□□ -0.35
SYNE3-203ENST00000554873 TRIB1Q96RU8 372 aa12.87□□□□□ -0.35
SYNE3-203ENST00000554873 KCNIP1Q9NZI2 227 aa12.87□□□□□ -0.35
SYNE3-203ENST00000554873 TRAPPC2LQ9UL33 140 aa12.87□□□□□ -0.35
SYNE3-203ENST00000554873 FOXH1O75593 365 aa12.86□□□□□ -0.35
SYNE3-203ENST00000554873 EFNB3Q15768 340 aa12.86□□□□□ -0.35
SYNE3-203ENST00000554873 SPATA31B1PQ5VZV4 182 aa12.86□□□□□ -0.35
SYNE3-203ENST00000554873 TPRX1Q8N7U7 411 aa12.86□□□□□ -0.35
SYNE3-203ENST00000554873 HES7Q9BYE0 225 aa12.86□□□□□ -0.35
SYNE3-203ENST00000554873 PKIBQ9C010 78 aa12.86□□□□□ -0.35
SYNE3-203ENST00000554873 USF3Q68DE3 2245 aa12.86□□□□□ -0.35
SYNE3-203ENST00000554873 ZNF497Q6ZNH5 498 aa12.86□□□□□ -0.35
SYNE3-203ENST00000554873 FA2HQ7L5A8 372 aa12.86□□□□□ -0.35
SYNE3-203ENST00000554873 CACNA1DQ01668 2161 aa12.86□□□□□ -0.35
SYNE3-203ENST00000554873 ZNF207O43670 478 aaKnown RBP12.85□□□□□ -0.35
SYNE3-203ENST00000554873 WISP2O76076 250 aa12.85□□□□□ -0.35
SYNE3-203ENST00000554873 AGFG2O95081 481 aa12.85□□□□□ -0.35
SYNE3-203ENST00000554873 OR2H2O95918 312 aa12.85□□□□□ -0.35
SYNE3-203ENST00000554873 OR5AL1P0C617 328 aa12.85□□□□□ -0.35
SYNE3-203ENST00000554873 ZNF788Q6ZQV5 615 aa12.85□□□□□ -0.35
SYNE3-203ENST00000554873 MBD6Q96DN6 1003 aa12.85□□□□□ -0.35
SYNE3-203ENST00000554873 AHCTF1Q8WYP5 2266 aa12.85□□□□□ -0.35
SYNE3-203ENST00000554873 H2BFWTQ7Z2G1 175 aa12.85□□□□□ -0.35
SYNE3-203ENST00000554873 FAM168AQ92567 244 aa12.85□□□□□ -0.35
SYNE3-203ENST00000554873 SPATA25Q9BR10 227 aa12.85□□□□□ -0.35
SYNE3-203ENST00000554873 MS4A5Q9H3V2 200 aa12.85□□□□□ -0.35
SYNE3-203ENST00000554873 J3QT63 122 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 NEURL1O76050 574 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 MOB1BQ7L9L4 216 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 NUP35Q8NFH5 326 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 MAFAQ8NHW3 353 aaPredicted RBP12.84□□□□□ -0.35
SYNE3-203ENST00000554873 MRAP2Q96G30 205 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 FAM173AQ9BQD7 235 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 SSBP3Q9BWW4 388 aaPredicted RBP12.84□□□□□ -0.35
SYNE3-203ENST00000554873 J3QR89 54 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 SNAI2O43623 268 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 LIPFP07098 398 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 FABP2P12104 132 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 ZXDAP98168 799 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 SSX8Q7RTT4 187 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 WDR86Q86TI4 376 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 ZBTB34Q8NCN2 500 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 IGF2BP2-AS1Q96M15 143 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 ZNF257Q9Y2Q1 563 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 K7EQM0 130 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 ZNF645Q8N7E2 425 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 SSMEM1Q8WWF3 244 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 C5orf30Q96GV9 206 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 FER1L6-AS2Q96M78 137 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 TMEM167BQ9NRX6 74 aa12.84□□□□□ -0.35
SYNE3-203ENST00000554873 A0A1W2PRE2 83 aa12.83□□□□□ -0.36
SYNE3-203ENST00000554873 MT-CO3P00414 261 aa12.83□□□□□ -0.36
SYNE3-203ENST00000554873 ADH4P08319 380 aa12.83□□□□□ -0.36
SYNE3-203ENST00000554873 MAGEA5P43359 124 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms