RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 ZNF331Q9NQX6 463 aaPredicted RBP7.79□□□□□ -1.16
SYNE2-213ENST00000554805 RPH3ALQ9UNE2 315 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 SLC25A15Q9Y619 301 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 IGKV1-16P04430 117 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 TNFSF4P23510 183 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 OR10W1Q8NGF6 305 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 SNRNP40Q96DI7 357 aaKnown RBP7.79□□□□□ -1.16
SYNE2-213ENST00000554805 GNB4Q9HAV0 340 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 TMEM14BQ9NUH8 114 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 ZGRF1Q86YA3 2104 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 TRAV5A0A0B4J249 113 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 A6NNC1 897 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 C9JCJ5 164 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 DIRC3C9JPN6 131 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 MMP23AO75900 390 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 CA1P00915 261 aaPredicted RBP7.79□□□□□ -1.16
SYNE2-213ENST00000554805 LINC00869P0C866 280 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 BRS3P32247 399 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 AARDQ4LEZ3 155 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 DDB2Q92466 427 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 SH3BGRL2Q9UJC5 107 aa7.79□□□□□ -1.16
SYNE2-213ENST00000554805 UPK2O00526 184 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 TNFSF13O75888 250 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 APOA2P02652 100 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 SRIP30626 198 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 ERHP84090 104 aaKnown RBP7.78□□□□□ -1.16
SYNE2-213ENST00000554805 FOXC1Q12948 553 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 IBA57Q5T440 356 aaKnown RBP7.78□□□□□ -1.16
SYNE2-213ENST00000554805 WDR73Q6P4I2 378 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 H1FXQ92522 213 aaKnown RBP7.78□□□□□ -1.16
SYNE2-213ENST00000554805 HARBI1Q96MB7 349 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 SFXN3Q9BWM7 321 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 TP53TG3Q9ULZ0 132 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 V9GYV3 84 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 TRAV9-1A0A075B6T8 112 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 COX7A2P2O60397 106 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 OR5G3P0C626 314 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 C8orf88P0DMB2 117 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 CHRNB4P30926 498 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 GLRXP35754 106 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 CCL8P80075 99 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 PRR20EP86478 221 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 PRR20CP86479 221 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 PRR20DP86480 221 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 PRR20BP86481 221 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 PRR20AP86496 221 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 PLA2G2CQ5R387 149 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 OR2T6Q8NHC8 308 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 C11orf52Q96A22 123 aa7.78□□□□□ -1.16
SYNE2-213ENST00000554805 TBL2Q9Y4P3 447 aaKnown RBP7.78□□□□□ -1.16
SYNE2-213ENST00000554805 ASH1LQ9NR48 2969 aaKnown RBP7.78□□□□□ -1.16
SYNE2-213ENST00000554805 TEX50A0A1B0GTY4 177 aa7.77□□□□□ -1.16
SYNE2-213ENST00000554805 PLAUP00749 431 aa7.77□□□□□ -1.16
SYNE2-213ENST00000554805 AREGP15514 252 aa7.77□□□□□ -1.16
SYNE2-213ENST00000554805 TDGF1P3P51864 188 aa7.77□□□□□ -1.16
SYNE2-213ENST00000554805 SELENOTP62341 195 aa7.77□□□□□ -1.16
SYNE2-213ENST00000554805 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.77□□□□□ -1.16
SYNE2-213ENST00000554805 NEUROG1Q92886 237 aa7.77□□□□□ -1.16
SYNE2-213ENST00000554805 CHODLQ9H9P2 273 aa7.77□□□□□ -1.16
SYNE2-213ENST00000554805 TRAV34A0A0B4J273 112 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 KIR2DL5BA0A0G2JN68 375 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 KIR2DL5BA0A0G2JPC4 375 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 SRRM4A7MD48 611 aaKnown RBP7.77□□□□□ -1.17
SYNE2-213ENST00000554805 RPLP1P05386 114 aaKnown RBP7.77□□□□□ -1.17
SYNE2-213ENST00000554805 SAA1P0DJI8 122 aaPredicted RBP7.77□□□□□ -1.17
SYNE2-213ENST00000554805 USF1P22415 310 aaPredicted RBP7.77□□□□□ -1.17
SYNE2-213ENST00000554805 PRCDQ00LT1 54 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 GUSBP1Q15486 140 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 C1orf174Q8IYL3 243 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 KIR2DL5AQ8N109 375 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 ZADH2Q8N4Q0 377 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 RBMXL3Q8N7X1 1067 aaKnown RBP7.77□□□□□ -1.17
SYNE2-213ENST00000554805 LINC00479Q96M42 142 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 NEU1Q99519 415 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 TXN2Q99757 166 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 MIEN1Q9BRT3 115 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 SLC25A10Q9UBX3 287 aaPredicted RBP7.77□□□□□ -1.17
SYNE2-213ENST00000554805 WT1P19544 449 aaPredicted RBP7.77□□□□□ -1.17
SYNE2-213ENST00000554805 FAM19A2Q8N3H0 131 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 RPRMLQ8N4K4 120 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 BORCS7Q96B45 105 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 SGK494Q96LW2 274 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 TMEM68Q96MH6 324 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 FBXL7Q9UJT9 491 aa7.77□□□□□ -1.17
SYNE2-213ENST00000554805 SPG11Q96JI7 2443 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 TMEM238LA0A1B0GVL6 79 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 hADV38S2A0JD32 116 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 GGTLC3B5MD39 225 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 KLK10O43240 276 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 APCSP02743 223 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 CT45A6P0DMU7 189 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 CT45A5P0DMU8 189 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 CT45A7P0DMV0 189 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 PRR31Q5SQ13 230 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 GNB1LQ9BYB4 327 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 MRPL20Q9BYC9 149 aaKnown RBP7.76□□□□□ -1.17
SYNE2-213ENST00000554805 NRN1Q9NPD7 142 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 LY96Q9Y6Y9 160 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 CSMD1Q96PZ7 3565 aa7.76□□□□□ -1.17
SYNE2-213ENST00000554805 TET2Q6N021 2002 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms