RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 TATDN3Q17R31 274 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 LGALS9BQ3B8N2 356 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 ZNF876PQ49A33 203 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 DNAL1Q4LDG9 190 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 UBR4Q5T4S7 5183 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 HES5Q5TA89 166 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 WDR73Q6P4I2 378 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 LINC00336Q6ZUF6 198 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 SLC16A13Q7RTY0 426 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 GBGT1Q8N5D6 347 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 POM121L12Q8N7R1 296 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.21□□□□□ -2.06
SLIRP-202ENST00000553981 TMEM170AQ8WVE7 144 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 GALNT14Q96FL9 552 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 C17orf77Q96MU5 243 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 SPAG8Q99932 426 aaPredicted RBP2.21□□□□□ -2.06
SLIRP-202ENST00000553981 CMSS1Q9BQ75 279 aaKnown RBP2.21□□□□□ -2.06
SLIRP-202ENST00000553981 UQCC2Q9BRT2 126 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 OR51E2Q9H255 320 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 CHMP1AQ9HD42 196 aaPredicted RBP2.21□□□□□ -2.06
SLIRP-202ENST00000553981 CCL28Q9NRJ3 127 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 PLEKHJ1Q9NW61 149 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 ABRACLQ9P1F3 81 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 SMPXQ9UHP9 88 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 ENOPH1Q9UHY7 261 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 HSF4Q9ULV5 492 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 ZNF257Q9Y2Q1 563 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 NSG2Q9Y328 171 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 RBMX2Q9Y388 322 aaKnown RBP2.21□□□□□ -2.06
SLIRP-202ENST00000553981 RPL36Q9Y3U8 105 aaKnown RBP2.21□□□□□ -2.06
SLIRP-202ENST00000553981 LRRC42Q9Y546 428 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 PKHD1L1Q86WI1 4243 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 IGHV7-4-1A0A0J9YVY3 117 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 TEX50A0A1B0GTY4 177 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 SMIM30A4D0T7 59 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 MPTX1A8MV57 137 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 I3L2K1 104 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 UPK2O00526 184 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 SLC17A2O00624 439 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 UBE2CO00762 179 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 TNFSF12O43508 249 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 ATP8B1O43520 1251 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 CDK1P06493 297 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 FCER2P06734 321 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 CD40LGP29965 261 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 MAS1LP35410 378 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 APOC4P55056 127 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 WNT4P56705 351 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 DEFB131AP59861 70 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 FABP5Q01469 135 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 SSX1Q16384 188 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 VMA21Q3ZAQ7 101 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 TIMM50Q3ZCQ8 353 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 RBM48Q5RL73 367 aaKnown RBP2.2□□□□□ -2.06
SLIRP-202ENST00000553981 C1orf146Q5VVC0 180 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 PVRIGQ6DKI7 326 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 OR4A47Q6IF82 309 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 MOB1BQ7L9L4 216 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 SH2D6Q7Z4S9 175 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 TRPT1Q86TN4 253 aaKnown RBP2.2□□□□□ -2.06
SLIRP-202ENST00000553981 MMD2Q8IY49 270 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 OR4A4PQ8NGN8 299 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 GIMAP1Q8WWP7 306 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 TMEM203Q969S6 136 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 EEF1AKMT3Q96AZ1 226 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 CPNE2Q96FN4 548 aaPredicted RBP2.2□□□□□ -2.06
SLIRP-202ENST00000553981 TMEM80Q96HE8 168 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 OR10C1Q96KK4 312 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 OR2A7Q96R45 310 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 RHPN1-AS1Q9BWJ2 59 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 S100A14Q9HCY8 104 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 RAB9BQ9NP90 201 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 CHCHD3Q9NX63 227 aaKnown RBP2.2□□□□□ -2.06
SLIRP-202ENST00000553981 GHRLQ9UBU3 117 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 PSORS1C1Q9UIG5 152 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 SPATA2Q9UM82 520 aa2.2□□□□□ -2.06
SLIRP-202ENST00000553981 EXOSC1Q9Y3B2 195 aaKnown RBP2.2□□□□□ -2.06
SLIRP-202ENST00000553981 A0A075B6Q4 140 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 EFCAB10A6NFE3 127 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 C15orf61A6NNL5 157 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 K7EMT4 169 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 K7EQG2 157 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 NDUFA4O00483 81 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 NUPL2O15504 423 aaKnown RBP2.19□□□□□ -2.06
SLIRP-202ENST00000553981 CDK2AP2O75956 126 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 DFFBO76075 338 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 NDUFB4O95168 129 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 CA1P00915 261 aaPredicted RBP2.19□□□□□ -2.06
SLIRP-202ENST00000553981 IGKV1-39P01597 117 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 IGKV1D-39P04432 117 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 HLA-GP17693 338 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 ELK1P19419 428 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 GALP22466 123 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 CRHBPP24387 322 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 PTBP1P26599 531 aaKnown RBP eCLIP2.19□□□□□ -2.06
SLIRP-202ENST00000553981 MAP2K4P45985 399 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 PPP5CP53041 499 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 ARFRP1Q13795 201 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 POU2AF1Q16633 256 aa2.19□□□□□ -2.06
SLIRP-202ENST00000553981 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms