RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 HOXB4P17483 251 aaPredicted RBP10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 PSG5Q15238 335 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 VMA21Q3ZAQ7 101 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 CENPVQ7Z7K6 275 aaPredicted RBP10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 OR11H6Q8NGC7 330 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 OR10G4Q8NGN3 311 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 OR10G9Q8NGN4 311 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 OR10G7Q8NGN6 311 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 RXFP4Q8TDU9 374 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 PFDN5Q99471 154 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 ANKRD17O75179 2603 aaKnown RBP10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 MAP1LC3B2A6NCE7 125 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 RAB4AP20338 218 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 TNXAQ16473 311 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 TMEM88Q6PEY1 159 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 ZNF709Q8N972 641 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 GGTLC1Q9BX51 225 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 SEC11CQ9BY50 192 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 NKX6-2Q9C056 277 aaPredicted RBP10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 MAP1LC3BQ9GZQ8 125 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 FKBP11Q9NYL4 201 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 METTL1Q9UBP6 276 aaKnown RBP10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 CARHSP1Q9Y2V2 147 aaKnown RBP10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 TIMM9Q9Y5J7 89 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 ODF3BA8MYP8 253 aa10.21□□□□□ -0.77
VIPAS39-206ENST00000553888 COL8A1P27658 744 aa10.21□□□□□ -0.77
VIPAS39-206ENST00000553888 AKR1C3P42330 323 aa10.21□□□□□ -0.77
VIPAS39-206ENST00000553888 RAB4BP61018 213 aa10.21□□□□□ -0.77
VIPAS39-206ENST00000553888 ICAM4Q14773 271 aa10.21□□□□□ -0.77
VIPAS39-206ENST00000553888 RUSC1-AS1Q66K80 236 aa10.21□□□□□ -0.77
VIPAS39-206ENST00000553888 GATAD1Q8WUU5 269 aa10.21□□□□□ -0.77
VIPAS39-206ENST00000553888 PERPQ96FX8 193 aa10.21□□□□□ -0.77
VIPAS39-206ENST00000553888 DPM3Q9P2X0 92 aa10.21□□□□□ -0.77
VIPAS39-206ENST00000553888 AMMECR1Q9Y4X0 333 aaPredicted RBP10.21□□□□□ -0.77
VIPAS39-206ENST00000553888 IGKV1OR2-108A0A075B7D4 117 aa10.21□□□□□ -0.78
VIPAS39-206ENST00000553888 YIF1AO95070 293 aa10.21□□□□□ -0.78
VIPAS39-206ENST00000553888 AREGP15514 252 aa10.21□□□□□ -0.78
VIPAS39-206ENST00000553888 S100PP25815 95 aa10.21□□□□□ -0.78
VIPAS39-206ENST00000553888 DLK1P80370 383 aa10.21□□□□□ -0.78
VIPAS39-206ENST00000553888 SLAQ13239 276 aa10.21□□□□□ -0.78
VIPAS39-206ENST00000553888 PEA15Q15121 130 aa10.21□□□□□ -0.78
VIPAS39-206ENST00000553888 DPPA3Q6W0C5 159 aa10.21□□□□□ -0.78
VIPAS39-206ENST00000553888 COMMD1Q8N668 190 aa10.21□□□□□ -0.78
VIPAS39-206ENST00000553888 VSTM2AQ8TAG5 236 aa10.21□□□□□ -0.78
VIPAS39-206ENST00000553888 C20orf24Q9BUV8 137 aa10.21□□□□□ -0.78
VIPAS39-206ENST00000553888 SIRPDQ9H106 197 aa10.21□□□□□ -0.78
VIPAS39-206ENST00000553888 KIAA1456Q9P272 454 aa10.21□□□□□ -0.78
VIPAS39-206ENST00000553888 SIGLEC9Q9Y336 463 aa10.21□□□□□ -0.78
VIPAS39-206ENST00000553888 IGHV4-61A0A0C4DH41 118 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 A4D1N5 150 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 VENTXO95231 258 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 CRYGBP07316 175 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 GATA2P23769 480 aaPredicted RBP10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 SSBP2P81877 361 aaPredicted RBP10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 PRSS8Q16651 343 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 BSXQ3C1V8 233 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 LFNGQ8NES3 379 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 CFHR4Q92496 578 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 IGHV2-70DA0A0C4DH43 119 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 LGALS7P47929 136 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 OR2T6Q8NHC8 308 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 MBD3L1Q8WWY6 194 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 SLC39A9Q9NUM3 307 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 LSM4Q9Y4Z0 139 aaKnown RBP10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 ABCA12Q86UK0 2595 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 ATP5J2P56134 94 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 CBLN2Q8IUK8 224 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 SVBPQ8N300 66 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 OR4A5Q8NH83 315 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 RAB24Q969Q5 203 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 TBX15Q96SF7 602 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 P2RX4Q99571 388 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 PBDC1Q9BVG4 233 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 OR51M1Q9H341 326 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 PXMP4Q9Y6I8 212 aa10.2□□□□□ -0.78
VIPAS39-206ENST00000553888 IGHV3OR16-10A0A075B7F0 116 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 IGHV3-21A0A0B4J1V1 117 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 DNASE2O00115 360 aaPredicted RBP10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 TOX4O94842 621 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 PDLIM4P50479 330 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 UBE2G2P60604 165 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 GAMTQ14353 236 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 C2orf83Q53S99 150 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 SHISA2Q6UWI4 295 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 FNDC4Q9H6D8 234 aaPredicted RBP10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 NPVFQ9HCQ7 196 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 MRPL36Q9P0J6 103 aaKnown RBP10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 PTPN13Q12923 2485 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 IGHV4-30-2A0A087WSY4 118 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 C17orf112F2Z3M2 114 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 MFAP2P55001 183 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 HES1Q14469 280 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 MMDQ15546 238 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 CYB561D1Q8N8Q1 229 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 FAM168AQ92567 244 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 ANAPC16Q96DE5 110 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 TENM4Q6N022 2769 aa10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 USP9YO00507 2555 aaPredicted RBP10.19□□□□□ -0.78
VIPAS39-206ENST00000553888 IGLC7A0M8Q6 106 aa10.18□□□□□ -0.78
VIPAS39-206ENST00000553888 HBE1P02100 147 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms