RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 UAP1Q16222 522 aaPredicted RBP1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 PCOTHQ58A44 107 aa1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 KRTAP5-7Q6L8G8 165 aa1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 HIST2H3AQ71DI3 136 aa1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 SLC35E3Q7Z769 313 aa1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 DCANP1Q8TF63 244 aa1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 DDI1Q8WTU0 396 aa1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 DNAJC9Q8WXX5 260 aa1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 MAGOHBQ96A72 148 aaKnown RBP1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 SERPINI1Q99574 410 aa1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 MRPL40Q9NQ50 206 aaKnown RBP1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 FKBP14Q9NWM8 211 aa1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 PAIP2BQ9ULR5 123 aaKnown RBP1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 KDM3BQ7LBC6 1761 aa1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 SBF1O95248 1867 aa1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 FN1P02751 2386 aaKnown RBP1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 FBN1P35555 2871 aaKnown RBP1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 PEAK1Q9H792 1746 aa1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 C1orf167Q5SNV9 1468 aa1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 PXDNQ92626 1479 aa1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 LAMA5O15230 3695 aa1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 VPS13AQ96RL7 3174 aa1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 SBF2Q86WG5 1849 aa1.43□□□□□ -2.18
EFCAB11-204ENST00000553871 DUOX1Q9NRD9 1551 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 TENM4Q6N022 2769 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 HYDINQ4G0P3 5121 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 TNS3Q68CZ2 1445 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 COL14A1Q05707 1796 aaKnown RBP1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 ZNF638Q14966 1978 aaKnown RBP1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 IGLV3-9A0A075B6K5 115 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 TMED7-TICAM2A0A0A6YYA0 188 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 TRAV41A0A0B4J266 112 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 SMIM31A0A1B0GVY4 71 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 EXOC1LA0A1B0GW35 172 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 SMIM23A6NLE4 172 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 NPYP01303 97 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 GPX1P07203 203 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 ZNF728P0DKX0 622 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 CD24P25063 80 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 CCR2P41597 374 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 EMP2P54851 167 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 RBM11P57052 281 aaKnown RBP1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 FXYD7P58549 80 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 TBPL1P62380 186 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 COTL1Q14019 142 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 PLPPR5Q32ZL2 321 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 C4orf22Q6V702 233 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 SPATA12Q7Z6I5 190 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 JOSD2Q8TAC2 188 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 RAB2BQ8WUD1 216 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 ITFG2Q969R8 447 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 OPTNQ96CV9 577 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 NMNAT3Q96T66 252 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 YIPF3Q9GZM5 350 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 MAP1LC3AQ9H492 121 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 SAR1AQ9NR31 198 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 USE1Q9NZ43 259 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 DKKL1Q9UK85 242 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 POLR1DQ9Y2S0 133 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 POLR3HQ9Y535 204 aaPredicted RBP1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 FAM215AQ9Y5M1 114 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 SPTA1P02549 2419 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 CREBBPQ92793 2442 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 TIAM2Q8IVF5 1701 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 PARP4Q9UKK3 1724 aaKnown RBP1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 ROBO3Q96MS0 1386 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 LTBP2Q14767 1821 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 NBEAQ8NFP9 2946 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 COL4A6Q14031 1691 aa1.42□□□□□ -2.18
EFCAB11-204ENST00000553871 TJP1Q07157 1748 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 AFDNP55196 1824 aaKnown RBP1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 WNK3Q9BYP7 1800 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 TRGV5A0A0B4J1U4 118 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 RFPL4AA6NLU0 287 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 SIGLEC16A6NMB1 481 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 RFPL4AL1F8VTS6 287 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 BPGMP07738 259 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 UCHL3P15374 230 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 SERPINB9P50453 376 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 CTBP2P56545 445 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 TAS2R20P59543 309 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 TMED2Q15363 201 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 SLC36A2Q495M3 483 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 OGFRL1Q5TC84 451 aaPredicted RBP1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 FAM78BQ5VT40 261 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 RASSF6Q6ZTQ3 369 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 COMMD7Q86VX2 200 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 CLDND2Q8NHS1 167 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 SMCR5Q8TEV8 140 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 EEF1AKMT1Q8WVE0 214 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 PARVGQ9HBI0 331 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 PARVBQ9HBI1 364 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 C8orf4Q9NR00 106 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 AP4S1Q9Y587 144 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 FREM2Q5SZK8 3169 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 COL1A1P02452 1464 aaPredicted RBP1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 COL6A5A8TX70 2615 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 SPENQ96T58 3664 aaKnown RBP1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 LTN1O94822 1766 aa1.41□□□□□ -2.18
EFCAB11-204ENST00000553871 PLXNA3P51805 1871 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms