RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 USF1P22415 310 aaPredicted RBP4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 CA7P43166 264 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 AMTP48728 403 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 ZNF134P52741 427 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 ZNF137PP52743 207 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 PRRX1P54821 245 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 SELENOVP59797 346 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 BPIFB3P59826 476 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 PSG5Q15238 335 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 TMEM177Q53S58 311 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 IBA57Q5T440 356 aaKnown RBP4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 TEX36Q5VZQ5 186 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 SPATA31B1PQ5VZV4 182 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 ZNF788Q6ZQV5 615 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 ZNF833PQ6ZTB9 187 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 MIR17HGQ75NE6 70 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 BHLHA15Q7RTS1 189 aaPredicted RBP4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 SSX8Q7RTT4 187 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 OR8I2Q8N0Y5 310 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 TPRX1Q8N7U7 411 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 THAP8Q8NA92 274 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 ST6GALNAC3Q8NDV1 305 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 STXBP6Q8NFX7 210 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 OR2Z1Q8NG97 314 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 VSTM2AQ8TAG5 236 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 TMEM167AQ8TBQ9 72 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 ZNF596Q8TC21 504 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 FAM167A-AS1Q96KT0 104 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 DCTN5Q9BTE1 182 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 TMEM208Q9BTX3 173 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 SAP30LQ9HAJ7 183 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 AP5S1Q9NUS5 200 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 NAT8BQ9UHF3 227 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 FBXL7Q9UJT9 491 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 PROCRQ9UNN8 238 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 MRPS16Q9Y3D3 137 aaKnown RBP4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 TBL2Q9Y4P3 447 aaKnown RBP4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 LINC00312Q9Y6C7 94 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 U3KQE9 123 aa4.28□□□□□ -1.72
TMEM55B-204ENST00000553602 FAM186AA6NE01 2351 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 IGKV1OR2-108A0A075B7D4 117 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 A0A1B0GXF2 115 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 A0A1W2PS18 150 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 hADV38S2A0JD32 116 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 NKX6-3A6NJ46 265 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 DIRC3C9JPN6 131 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 CDX4O14627 284 aaPredicted RBP4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 OR7C2O60412 319 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 CEACAM4O75871 244 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 APOA2P02652 100 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 APCSP02743 223 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 SAA1P0DJI8 122 aaPredicted RBP4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 IGLC2P0DOY2 106 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 IGLC3P0DOY3 106 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 HIST1H1EP10412 219 aaKnown RBP4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 IRF2P14316 349 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 BMP5P22003 454 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 TNFSF4P23510 183 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 CRYBB3P26998 211 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 CDKN1AP38936 164 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 PLA2G5P39877 138 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 MYCNOSP40205 109 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 FABP6P51161 128 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 LINC00205P59089 165 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 RPS16P62249 146 aaKnown RBP4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 OR5I1Q13606 314 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 TBR1Q16650 682 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 HES3Q5TGS1 186 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 ZNF705AQ6ZN79 300 aaPredicted RBP4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 VASH2Q86V25 355 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 NIT1Q86X76 327 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 PDPNQ86YL7 162 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 VKORC1L1Q8N0U8 176 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 LINC00311Q8N616 119 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 CNEP1R1Q8N9A8 125 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 NUP37Q8NFH4 326 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 OR5AN1Q8NGI8 311 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 VN1R17PQ8TDU5 208 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 ORAOV1Q8WV07 137 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 STARD4Q96DR4 205 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 GRAMD2BQ96HH9 432 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 GAFA1Q96PS6 74 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 GFRA4Q9GZZ7 299 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 GAL3ST2Q9H3Q3 398 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 ZNF430Q9H8G1 570 aaPredicted RBP4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 LPAR2Q9HBW0 351 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 NRN1Q9NPD7 142 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 NDUFA4L2Q9NRX3 87 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 SLC35D1Q9NTN3 355 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 ZNF492Q9P255 531 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 RNF7Q9UBF6 113 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 ZFP30Q9Y2G7 519 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 GOLT1BQ9Y3E0 138 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 AMMECR1Q9Y4X0 333 aaPredicted RBP4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 KLF12Q9Y4X4 402 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 R4GN57 208 aa4.27□□□□□ -1.73
TMEM55B-204ENST00000553602 IGHV3-64DA0A0J9YX35 117 aa4.26□□□□□ -1.73
TMEM55B-204ENST00000553602 TRBV6-1A0A0K0K1D8 114 aa4.26□□□□□ -1.73
TMEM55B-204ENST00000553602 TEX50A0A1B0GTY4 177 aa4.26□□□□□ -1.73
TMEM55B-204ENST00000553602 TCRBV4S1A1TA0A5B7 111 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms