RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 SMPD3Q9NY59 655 aaPredicted RBP3.81□□□□□ -1.8
HOXB3-213ENST00000552000 C21orf62Q9NYP8 219 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 THYN1Q9P016 225 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 RABL2AQ9UBK7 228 aaPredicted RBP3.81□□□□□ -1.8
HOXB3-213ENST00000552000 RBMX2Q9Y388 322 aaKnown RBP3.81□□□□□ -1.8
HOXB3-213ENST00000552000 PKHD1L1Q86WI1 4243 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 IGKV1D-8A0A087WSZ0 117 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 TRAV14DV4A0A0A6YYC5 116 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 TRAV3A0A0B4J244 114 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 IGHV3-66A0A0C4DH42 116 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 KRTAP29-1A8MX34 341 aaPredicted RBP3.8□□□□□ -1.8
HOXB3-213ENST00000552000 WBP4O75554 376 aaKnown RBP3.8□□□□□ -1.8
HOXB3-213ENST00000552000 DIRAS3O95661 229 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 HRASP01112 189 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 EIF4EP06730 217 aaKnown RBP3.8□□□□□ -1.8
HOXB3-213ENST00000552000 CTSGP08311 255 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 OR13C7P0DN81 318 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 SPP1P10451 314 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 CD36P16671 472 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 BRWD1-AS2P59051 145 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 TAS2R43P59537 309 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 TIMM50Q3ZCQ8 353 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 Q5VSD8 79 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 CBR4Q8N4T8 237 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 GDPD1Q8N9F7 314 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 CSNK1G2-AS1Q8NCQ2 148 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 CCDC197Q8NCU1 140 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 SCARB1Q8WTV0 552 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 ST8SIA2Q92186 375 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 SLC7A6OSQ96CW6 309 aaPredicted RBP3.8□□□□□ -1.8
HOXB3-213ENST00000552000 ZNF414Q96IQ9 312 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 FAM210BQ96KR6 192 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 GPHA2Q96T91 129 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 QTRT1Q9BXR0 403 aaKnown RBP3.8□□□□□ -1.8
HOXB3-213ENST00000552000 YTHDF1Q9BYJ9 559 aaKnown RBP3.8□□□□□ -1.8
HOXB3-213ENST00000552000 HRASLSQ9HDD0 168 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 HSPB7Q9UBY9 170 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 RABAC1Q9UI14 185 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 SPATA2Q9UM82 520 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 DIMT1Q9UNQ2 313 aaKnown RBP3.8□□□□□ -1.8
HOXB3-213ENST00000552000 TMED3Q9Y3Q3 217 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 FAT3Q8TDW7 4589 aa3.8□□□□□ -1.8
HOXB3-213ENST00000552000 A0A075B6Q4 140 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 IGKV1D-13A0A0B4J2D9 117 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 LOC100130705A0A1B0GUX0 176 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 IRGMA1A4Y4 181 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 K7EIM0 57 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 CYB5BO43169 146 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 ST8SIA3O43173 380 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 NOL3O60936 208 aaKnown RBP3.79□□□□□ -1.8
HOXB3-213ENST00000552000 APOHP02749 345 aaPredicted RBP3.79□□□□□ -1.8
HOXB3-213ENST00000552000 CDK1P06493 297 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 ZNF688P0C7X2 276 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 SPART-AS1P0CW21 52 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 IGKV1-13P0DP09 117 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 CD37P11049 281 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 NFYAP23511 347 aaPredicted RBP3.79□□□□□ -1.8
HOXB3-213ENST00000552000 CLDN12P56749 244 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 TIRAPP58753 221 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 RELQ04864 619 aaPredicted RBP3.79□□□□□ -1.8
HOXB3-213ENST00000552000 ACSM3Q53FZ2 586 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 ACTL10Q5JWF8 245 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 C1orf146Q5VVC0 180 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 UBE2UQ5VVX9 321 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 TMEM88Q6PEY1 159 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 ZNF66Q6ZN08 573 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 Q6ZSN1 163 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 STXBP6Q8NFX7 210 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 OR56B1Q8NGI3 324 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 PYDC1Q8WXC3 89 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 PHYHIPQ92561 330 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 NPIPB3Q92617 1050 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 FRZBQ92765 325 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 DGCR14Q96DF8 476 aaKnown RBP3.79□□□□□ -1.8
HOXB3-213ENST00000552000 TMEM80Q96HE8 168 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 ATG101Q9BSB4 218 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 HINT2Q9BX68 163 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 COMMD5Q9GZQ3 224 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 PLGRKTQ9HBL7 147 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 BET1LQ9NYM9 111 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 TAS2R8Q9NYW2 309 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 MDFICQ9P1T7 246 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 XCL2Q9UBD3 114 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 KCNK7Q9Y2U2 307 aa3.79□□□□□ -1.8
HOXB3-213ENST00000552000 TRAV2A0A0B4J234 112 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 UPK2O00526 184 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 SLC17A2O00624 439 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 TNFSF12O43508 249 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 DENRO43583 198 aaKnown RBP3.78□□□□□ -1.8
HOXB3-213ENST00000552000 SLC22A5O76082 557 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 IGLV2-14P01704 120 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 IGHV3-48P01763 117 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 HLA-DQB1P01920 261 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 CD5P06127 495 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 SERPINE2P07093 398 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 TRAPPC2P0DI81 140 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 TRAPPC2BP0DI82 140 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 GNB3P16520 340 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 WT1-ASQ06250 92 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 EIF4EBP1Q13541 118 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms