RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 TMEM14BQ9NUH8 114 aa10.31□□□□□ -0.76
CHMP1A-210ENST00000551981 MT-CO2P00403 227 aa10.3□□□□□ -0.76
CHMP1A-210ENST00000551981 SPP1P10451 314 aa10.3□□□□□ -0.76
CHMP1A-210ENST00000551981 TOMM20LQ6UXN7 152 aa10.3□□□□□ -0.76
CHMP1A-210ENST00000551981 ZNF114Q8NC26 417 aa10.3□□□□□ -0.76
CHMP1A-210ENST00000551981 NRG4Q8WWG1 115 aa10.3□□□□□ -0.76
CHMP1A-210ENST00000551981 SLC25A38Q96DW6 304 aa10.3□□□□□ -0.76
CHMP1A-210ENST00000551981 VSIRQ9H7M9 311 aa10.3□□□□□ -0.76
CHMP1A-210ENST00000551981 IFT46Q9NQC8 304 aa10.3□□□□□ -0.76
CHMP1A-210ENST00000551981 EHFQ9NZC4 300 aa10.3□□□□□ -0.76
CHMP1A-210ENST00000551981 RABAC1Q9UI14 185 aa10.3□□□□□ -0.76
CHMP1A-210ENST00000551981 SSR3Q9UNL2 185 aa10.3□□□□□ -0.76
CHMP1A-210ENST00000551981 MUC4Q99102 2169 aa10.3□□□□□ -0.76
CHMP1A-210ENST00000551981 PRSS29PA6NIE9 313 aa10.29□□□□□ -0.76
CHMP1A-210ENST00000551981 RBMY1A1P0DJD3 496 aaKnown RBP10.29□□□□□ -0.76
CHMP1A-210ENST00000551981 RBMY1CP0DJD4 496 aa10.29□□□□□ -0.76
CHMP1A-210ENST00000551981 P0DMU3 169 aa10.29□□□□□ -0.76
CHMP1A-210ENST00000551981 FAM231AP0DMU4 169 aa10.29□□□□□ -0.76
CHMP1A-210ENST00000551981 FAM231CP0DMU5 169 aa10.29□□□□□ -0.76
CHMP1A-210ENST00000551981 NPBWR1P48145 328 aa10.29□□□□□ -0.76
CHMP1A-210ENST00000551981 RBMY1FQ15415 496 aaKnown RBP10.29□□□□□ -0.76
CHMP1A-210ENST00000551981 DHRS11Q6UWP2 260 aa10.29□□□□□ -0.76
CHMP1A-210ENST00000551981 OR5H6Q8NGV6 325 aa10.29□□□□□ -0.76
CHMP1A-210ENST00000551981 OR4A16Q8NH70 328 aa10.29□□□□□ -0.76
CHMP1A-210ENST00000551981 PINX1Q96BK5 328 aaKnown RBP10.29□□□□□ -0.76
CHMP1A-210ENST00000551981 MOB3AQ96BX8 217 aa10.29□□□□□ -0.76
CHMP1A-210ENST00000551981 CNBD2Q96M20 576 aa10.29□□□□□ -0.76
CHMP1A-210ENST00000551981 ZNF2Q9BSG1 426 aaPredicted RBP10.29□□□□□ -0.76
CHMP1A-210ENST00000551981 IGHV3-66A0A0C4DH42 116 aa10.28□□□□□ -0.76
CHMP1A-210ENST00000551981 DBX1A6NMT0 343 aa10.28□□□□□ -0.76
CHMP1A-210ENST00000551981 ZNF705EA8MWA4 302 aaPredicted RBP10.28□□□□□ -0.76
CHMP1A-210ENST00000551981 GPR31O00270 319 aa10.28□□□□□ -0.76
CHMP1A-210ENST00000551981 IGHV3-48P01763 117 aa10.28□□□□□ -0.76
CHMP1A-210ENST00000551981 AMBPP02760 352 aa10.28□□□□□ -0.76
CHMP1A-210ENST00000551981 PSMB9P28065 219 aa10.28□□□□□ -0.76
CHMP1A-210ENST00000551981 SDC2P34741 201 aa10.28□□□□□ -0.76
CHMP1A-210ENST00000551981 HSPA13P48723 471 aa10.28□□□□□ -0.76
CHMP1A-210ENST00000551981 MXD1Q05195 221 aa10.28□□□□□ -0.76
CHMP1A-210ENST00000551981 IDNKQ5T6J7 187 aa10.28□□□□□ -0.76
CHMP1A-210ENST00000551981 UBE2UQ5VVX9 321 aa10.28□□□□□ -0.76
CHMP1A-210ENST00000551981 TRPT1Q86TN4 253 aaKnown RBP10.28□□□□□ -0.76
CHMP1A-210ENST00000551981 FAM24BQ8N5W8 94 aa10.28□□□□□ -0.76
CHMP1A-210ENST00000551981 VCX3BQ9H321 246 aa10.28□□□□□ -0.76
CHMP1A-210ENST00000551981 A0A1W2PS18 150 aa10.27□□□□□ -0.77
CHMP1A-210ENST00000551981 MEIS3P1A6NDR6 274 aa10.27□□□□□ -0.77
CHMP1A-210ENST00000551981 APOHP02749 345 aaPredicted RBP10.27□□□□□ -0.77
CHMP1A-210ENST00000551981 S100GP29377 79 aa10.27□□□□□ -0.77
CHMP1A-210ENST00000551981 GABARAPL2P60520 117 aa10.27□□□□□ -0.77
CHMP1A-210ENST00000551981 ERHP84090 104 aaKnown RBP10.27□□□□□ -0.77
CHMP1A-210ENST00000551981 PRCDQ00LT1 54 aa10.27□□□□□ -0.77
CHMP1A-210ENST00000551981 ZNF600Q6ZNG1 722 aa10.27□□□□□ -0.77
CHMP1A-210ENST00000551981 LILRB2Q8N423 598 aa10.27□□□□□ -0.77
CHMP1A-210ENST00000551981 POM121L12Q8N7R1 296 aa10.27□□□□□ -0.77
CHMP1A-210ENST00000551981 GRAMD2BQ96HH9 432 aa10.27□□□□□ -0.77
CHMP1A-210ENST00000551981 TBC1D24Q9ULP9 559 aa10.27□□□□□ -0.77
CHMP1A-210ENST00000551981 PUS1Q9Y606 427 aaKnown RBP eCLIP10.27□□□□□ -0.77
CHMP1A-210ENST00000551981 AGRNO00468 2067 aa10.27□□□□□ -0.77
CHMP1A-210ENST00000551981 ELOA3CA0A087WX78 387 aaPredicted RBP10.26□□□□□ -0.77
CHMP1A-210ENST00000551981 DEFB131BA0A096LNP1 70 aa10.26□□□□□ -0.77
CHMP1A-210ENST00000551981 GIG44P09565 113 aaPredicted RBP10.26□□□□□ -0.77
CHMP1A-210ENST00000551981 C4BPBP20851 252 aa10.26□□□□□ -0.77
CHMP1A-210ENST00000551981 NPPCP23582 126 aa10.26□□□□□ -0.77
CHMP1A-210ENST00000551981 RFX2P48378 723 aa10.26□□□□□ -0.77
CHMP1A-210ENST00000551981 TAS2R46P59540 309 aa10.26□□□□□ -0.77
CHMP1A-210ENST00000551981 H2BFWTQ7Z2G1 175 aa10.26□□□□□ -0.77
CHMP1A-210ENST00000551981 STXBP6Q8NFX7 210 aa10.26□□□□□ -0.77
CHMP1A-210ENST00000551981 OR5H2Q8NGV7 314 aa10.26□□□□□ -0.77
CHMP1A-210ENST00000551981 FCGR1BQ92637 280 aa10.26□□□□□ -0.77
CHMP1A-210ENST00000551981 NDUFAF3Q9BU61 184 aa10.26□□□□□ -0.77
CHMP1A-210ENST00000551981 ZFAND3Q9H8U3 227 aa10.26□□□□□ -0.77
CHMP1A-210ENST00000551981 FAM212BQ9NTI7 297 aaPredicted RBP10.26□□□□□ -0.77
CHMP1A-210ENST00000551981 X6R8D5 127 aa10.26□□□□□ -0.77
CHMP1A-210ENST00000551981 SCGB2A1O75556 95 aa10.25□□□□□ -0.77
CHMP1A-210ENST00000551981 PMP2P02689 132 aa10.25□□□□□ -0.77
CHMP1A-210ENST00000551981 CLEC2LP0C7M8 214 aa10.25□□□□□ -0.77
CHMP1A-210ENST00000551981 HSPE1P61604 102 aaKnown RBP10.25□□□□□ -0.77
CHMP1A-210ENST00000551981 IZUMO2Q6UXV1 221 aa10.25□□□□□ -0.77
CHMP1A-210ENST00000551981 OR6F1Q8NGZ6 308 aa10.25□□□□□ -0.77
CHMP1A-210ENST00000551981 NARS2Q96I59 477 aaKnown RBP10.25□□□□□ -0.77
CHMP1A-210ENST00000551981 METTL26Q96S19 204 aa10.25□□□□□ -0.77
CHMP1A-210ENST00000551981 FXYD6Q9H0Q3 95 aa10.25□□□□□ -0.77
CHMP1A-210ENST00000551981 KNCNA6PVL3 124 aa10.24□□□□□ -0.77
CHMP1A-210ENST00000551981 K7EQG2 157 aa10.24□□□□□ -0.77
CHMP1A-210ENST00000551981 RTL8CO15255 209 aa10.24□□□□□ -0.77
CHMP1A-210ENST00000551981 TMEM127O75204 238 aa10.24□□□□□ -0.77
CHMP1A-210ENST00000551981 ZNF688P0C7X2 276 aa10.24□□□□□ -0.77
CHMP1A-210ENST00000551981 NPY1RP25929 384 aa10.24□□□□□ -0.77
CHMP1A-210ENST00000551981 SNCAP37840 140 aa10.24□□□□□ -0.77
CHMP1A-210ENST00000551981 KCTD21Q4G0X4 260 aa10.24□□□□□ -0.77
CHMP1A-210ENST00000551981 PHLDA2Q53GA4 152 aa10.24□□□□□ -0.77
CHMP1A-210ENST00000551981 ACTL10Q5JWF8 245 aa10.24□□□□□ -0.77
CHMP1A-210ENST00000551981 LPCAT3Q6P1A2 487 aa10.24□□□□□ -0.77
CHMP1A-210ENST00000551981 S100A16Q96FQ6 103 aaKnown RBP10.24□□□□□ -0.77
CHMP1A-210ENST00000551981 SEC22AQ96IW7 307 aa10.24□□□□□ -0.77
CHMP1A-210ENST00000551981 CLEC5AQ9NY25 188 aa10.24□□□□□ -0.77
CHMP1A-210ENST00000551981 LOC100506127A0A0U1RQW1 187 aa10.23□□□□□ -0.77
CHMP1A-210ENST00000551981 A0A1B0GU03 582 aa10.23□□□□□ -0.77
CHMP1A-210ENST00000551981 M0R2N4 97 aa10.23□□□□□ -0.77
CHMP1A-210ENST00000551981 TMEM50AO95807 157 aa10.23□□□□□ -0.77
CHMP1A-210ENST00000551981 EIF2B2P49770 351 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 244.6 ms