RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 TMEM187Q14656 261 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 OXA1LQ15070 435 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 SP6Q3SY56 376 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 LYG2Q86SG7 212 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 TMEM219Q86XT9 240 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 SBSPONQ8IVN8 264 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 FAM71E2Q8N5Q1 922 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 C5orf56Q8N8D9 126 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 PRR26Q8N8Z3 221 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 LRTM2Q8N967 370 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 TEX45Q8NA69 505 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 MINDY2Q8NBR6 621 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 OR4F17Q8NGA8 305 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 CHPT1Q8WUD6 406 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 RBPMSQ93062 196 aaKnown RBP5□□□□□ -1.61
DEPDC4-210ENST00000551642 IL22RA2Q969J5 263 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 HARBI1Q96MB7 349 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 OR4F4Q96R69 305 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 SLC25A33Q9BSK2 321 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 MOB4Q9Y3A3 225 aa5□□□□□ -1.61
DEPDC4-210ENST00000551642 DUXBA0A1W2PPF3 345 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 SRRM4A7MD48 611 aaKnown RBP4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 INMT-MINDY4F8WBC2 141 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 CHST1O43916 411 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 ATG12O94817 140 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 S1PR2O95136 353 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 DHFRP00374 187 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 IGKV1-39P01597 117 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 HLA-AP01891 365 aaKnown RBP4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 IGKV1D-39P04432 117 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 CRYGBP07316 175 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 P0C879 139 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 SPNP16150 400 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 CNTFRP26992 372 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 UBE2KP61086 200 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 PSG5Q15238 335 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 MMDQ15546 238 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 LY6EQ16553 131 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 VMA21Q3ZAQ7 101 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 PPP1R27Q86WC6 154 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 PUSL1Q8N0Z8 303 aaKnown RBP4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 LGI3Q8N145 548 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 RPP25LQ8N5L8 163 aaKnown RBP4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 Q8N9W7 124 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 OR4A5Q8NH83 315 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 LHFPL5Q8TAF8 219 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 VSTM2AQ8TAG5 236 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 MITD1Q8WV92 249 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 SEC22AQ96IW7 307 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 CITED2Q99967 270 aaPredicted RBP4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 RANBP3Q9H6Z4 567 aaPredicted RBP4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 BET1LQ9NYM9 111 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 KIAA1456Q9P272 454 aa4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 METTL1Q9UBP6 276 aaKnown RBP4.99□□□□□ -1.61
DEPDC4-210ENST00000551642 A0A0B4J2A0 478 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 C7orf66A4D0T2 115 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 NCBP2LA6PVI3 153 aaKnown RBP4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 SNRPGP15A8MWD9 76 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 SLC25A17O43808 307 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 CREBL2O60519 120 aaPredicted RBP4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 KBTBD11O94819 623 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 OR2A4O95047 310 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 KRASP01116 189 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 IGKV1-5P01602 117 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 HLA-DRB1P01911 266 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 SAA1P0DJI8 122 aaPredicted RBP4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 G6PCP35575 357 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 ERVK-16P61578 105 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 C5orf64Q2M2E5 130 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 MRGPRG-AS1Q2M3A8 158 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 TRIM16LQ309B1 348 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 ANKRD55Q3KP44 614 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 TMEM268Q5VZI3 342 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 OR4A47Q6IF82 309 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 LIN54Q6MZP7 749 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 NDUFA11Q86Y39 141 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 ZNF695Q8IW36 515 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 FAM219AQ8IW50 185 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 SELENOHQ8IZQ5 122 aaKnown RBP4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 VKORC1L1Q8N0U8 176 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 Q8N2B8 174 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 SLC35G3Q8N808 338 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 DMBX1Q8NFW5 382 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 OR52B4Q8NGK2 314 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 COQ8AQ8NI60 647 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 TMEM167AQ8TBQ9 72 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 ZNF431Q8TF32 576 aaPredicted RBP4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 LSM10Q969L4 123 aaKnown RBP4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 OR2A7Q96R45 310 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 PHB2Q99623 299 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 RASL11BQ9BPW5 248 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 NPFFR1Q9GZQ6 430 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 GPN1Q9HCN4 374 aaPredicted RBP4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 SHPKQ9UHJ6 478 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 TMED3Q9Y3Q3 217 aa4.98□□□□□ -1.61
DEPDC4-210ENST00000551642 A0A0B4J293 547 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 UPK2O00526 184 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 IGHG2P01859 326 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 SLC25A6P12236 298 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 VDAC1P21796 283 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms