RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 TMEM116Q8NCL8 245 aa17.12■□□□□ 0.33
TROAP-216ENST00000551567 ABHD1Q96SE0 405 aa17.12■□□□□ 0.33
TROAP-216ENST00000551567 NXF2Q9GZY0 626 aaKnown RBP17.12■□□□□ 0.33
TROAP-216ENST00000551567 IGHV3OR16-13A0A075B7E8 117 aa17.11■□□□□ 0.33
TROAP-216ENST00000551567 IGHV3-74A0A0B4J1X5 117 aa17.11■□□□□ 0.33
TROAP-216ENST00000551567 C3orf85A0A1B0GTC6 90 aa17.11■□□□□ 0.33
TROAP-216ENST00000551567 CHEK1O14757 476 aa17.11■□□□□ 0.33
TROAP-216ENST00000551567 RPL35AP18077 110 aaKnown RBP17.11■□□□□ 0.33
TROAP-216ENST00000551567 TBPP20226 339 aa17.11■□□□□ 0.33
TROAP-216ENST00000551567 OR10C1Q96KK4 312 aa17.11■□□□□ 0.33
TROAP-216ENST00000551567 IGKV3-7A0A075B6H7 116 aa17.1■□□□□ 0.33
TROAP-216ENST00000551567 A0A0B4J293 547 aa17.1■□□□□ 0.33
TROAP-216ENST00000551567 A0A0J9YWU9 116 aa17.1■□□□□ 0.33
TROAP-216ENST00000551567 ST8SIA3O43173 380 aa17.1■□□□□ 0.33
TROAP-216ENST00000551567 SPRY2O43597 315 aa17.1■□□□□ 0.33
TROAP-216ENST00000551567 P0C879 139 aa17.1■□□□□ 0.33
TROAP-216ENST00000551567 TFPI2P48307 235 aa17.1■□□□□ 0.33
TROAP-216ENST00000551567 SCGB2B2Q4G0G5 96 aa17.1■□□□□ 0.33
TROAP-216ENST00000551567 Q6ZWC4 215 aa17.1■□□□□ 0.33
TROAP-216ENST00000551567 APRG1Q8IVJ8 170 aa17.1■□□□□ 0.33
TROAP-216ENST00000551567 OR13C8Q8NGS7 320 aa17.1■□□□□ 0.33
TROAP-216ENST00000551567 COPZ2Q9P299 210 aa17.1■□□□□ 0.33
TROAP-216ENST00000551567 IFNA17P01571 189 aa17.09■□□□□ 0.33
TROAP-216ENST00000551567 SNCAP37840 140 aa17.09■□□□□ 0.33
TROAP-216ENST00000551567 PMS2P11Q13670 270 aa17.09■□□□□ 0.33
TROAP-216ENST00000551567 TRIM16LQ309B1 348 aa17.09■□□□□ 0.33
TROAP-216ENST00000551567 SP6Q3SY56 376 aa17.09■□□□□ 0.33
TROAP-216ENST00000551567 STPG3Q8N7X2 389 aa17.09■□□□□ 0.33
TROAP-216ENST00000551567 MIXL1Q9H2W2 232 aa17.09■□□□□ 0.33
TROAP-216ENST00000551567 TP53TG1Q9Y2A0 90 aa17.09■□□□□ 0.33
TROAP-216ENST00000551567 HYDINQ4G0P3 5121 aa17.08■□□□□ 0.32
TROAP-216ENST00000551567 EPPK1P58107 5090 aaKnown RBP17.08■□□□□ 0.32
TROAP-216ENST00000551567 TRAV14DV4A0A0A6YYC5 116 aa17.08■□□□□ 0.32
TROAP-216ENST00000551567 RGS5O15539 181 aa17.08■□□□□ 0.32
TROAP-216ENST00000551567 RAB3DO95716 219 aa17.08■□□□□ 0.32
TROAP-216ENST00000551567 EWSR1Q01844 656 aaKnown RBP eCLIP17.08■□□□□ 0.32
TROAP-216ENST00000551567 ZNF124Q15973 351 aa17.08■□□□□ 0.32
TROAP-216ENST00000551567 LYG2Q86SG7 212 aa17.08■□□□□ 0.32
TROAP-216ENST00000551567 WFDC3Q8IUB2 231 aa17.08■□□□□ 0.32
TROAP-216ENST00000551567 CCDC71LQ8N9Z2 235 aa17.08■□□□□ 0.32
TROAP-216ENST00000551567 TMEM229BQ8NBD8 167 aa17.08■□□□□ 0.32
TROAP-216ENST00000551567 TERB2Q8NHR7 220 aa17.08■□□□□ 0.32
TROAP-216ENST00000551567 ZFAND1Q8TCF1 268 aa17.08■□□□□ 0.32
TROAP-216ENST00000551567 MARCH1Q8TCQ1 289 aa17.08■□□□□ 0.32
TROAP-216ENST00000551567 PDCD10Q9BUL8 212 aa17.08■□□□□ 0.32
TROAP-216ENST00000551567 KIR2DL5BA0A0G2JN68 375 aa17.07■□□□□ 0.32
TROAP-216ENST00000551567 KIR2DL5BA0A0G2JPC4 375 aa17.07■□□□□ 0.32
TROAP-216ENST00000551567 UBE2CO00762 179 aa17.07■□□□□ 0.32
TROAP-216ENST00000551567 ATG12O94817 140 aa17.07■□□□□ 0.32
TROAP-216ENST00000551567 CD74P04233 296 aa17.07■□□□□ 0.32
TROAP-216ENST00000551567 BMI1P35226 326 aa17.07■□□□□ 0.32
TROAP-216ENST00000551567 HOXA1P49639 335 aaPredicted RBP17.07■□□□□ 0.32
TROAP-216ENST00000551567 TAS2R19P59542 299 aa17.07■□□□□ 0.32
TROAP-216ENST00000551567 FAAP20Q6NZ36 180 aa17.07■□□□□ 0.32
TROAP-216ENST00000551567 STEAP1BQ6NZ63 245 aa17.07■□□□□ 0.32
TROAP-216ENST00000551567 KIR2DL5AQ8N109 375 aa17.07■□□□□ 0.32
TROAP-216ENST00000551567 GBGT1Q8N5D6 347 aa17.07■□□□□ 0.32
TROAP-216ENST00000551567 KIR2DL5BQ8NHK3 375 aa17.07■□□□□ 0.32
TROAP-216ENST00000551567 RNASE11Q8TAA1 199 aaKnown RBP17.07■□□□□ 0.32
TROAP-216ENST00000551567 C15orf40Q8WUR7 153 aa17.07■□□□□ 0.32
TROAP-216ENST00000551567 GALNT14Q96FL9 552 aa17.07■□□□□ 0.32
TROAP-216ENST00000551567 PLECQ15149 4684 aaKnown RBP17.06■□□□□ 0.32
TROAP-216ENST00000551567 A0A0G2JRQ6 117 aa17.06■□□□□ 0.32
TROAP-216ENST00000551567 CXorf65A6NEN9 183 aa17.06■□□□□ 0.32
TROAP-216ENST00000551567 ETV6P41212 452 aa17.06■□□□□ 0.32
TROAP-216ENST00000551567 NPBWR1P48145 328 aa17.06■□□□□ 0.32
TROAP-216ENST00000551567 TOMM20LQ6UXN7 152 aa17.06■□□□□ 0.32
TROAP-216ENST00000551567 DUSP18Q8NEJ0 188 aa17.06■□□□□ 0.32
TROAP-216ENST00000551567 GINS3Q9BRX5 216 aa17.06■□□□□ 0.32
TROAP-216ENST00000551567 ALMS1Q8TCU4 4167 aa17.05■□□□□ 0.32
TROAP-216ENST00000551567 GABARAPH6UMI1 98 aa17.05■□□□□ 0.32
TROAP-216ENST00000551567 RNASE2P10153 161 aaKnown RBP17.05■□□□□ 0.32
TROAP-216ENST00000551567 UCP1P25874 307 aa17.05■□□□□ 0.32
TROAP-216ENST00000551567 TNFRSF9Q07011 255 aa17.05■□□□□ 0.32
TROAP-216ENST00000551567 TCF24Q7RTU0 167 aa17.05■□□□□ 0.32
TROAP-216ENST00000551567 GPR141Q7Z602 305 aa17.05■□□□□ 0.32
TROAP-216ENST00000551567 ST8SIA2Q92186 375 aa17.05■□□□□ 0.32
TROAP-216ENST00000551567 RNF183Q96D59 192 aa17.05■□□□□ 0.32
TROAP-216ENST00000551567 RRNAD1Q96FB5 475 aaKnown RBP17.05■□□□□ 0.32
TROAP-216ENST00000551567 MRPS26Q9BYN8 205 aaKnown RBP17.05■□□□□ 0.32
TROAP-216ENST00000551567 C6orf62Q9GZU0 229 aaPredicted RBP17.05■□□□□ 0.32
TROAP-216ENST00000551567 MAP6D1Q9H9H5 199 aa17.05■□□□□ 0.32
TROAP-216ENST00000551567 PUS1Q9Y606 427 aaKnown RBP eCLIP17.05■□□□□ 0.32
TROAP-216ENST00000551567 INS-IGF2F8WCM5 200 aa17.04■□□□□ 0.32
TROAP-216ENST00000551567 CTDSP2O14595 271 aa17.04■□□□□ 0.32
TROAP-216ENST00000551567 APOHP02749 345 aaPredicted RBP17.04■□□□□ 0.32
TROAP-216ENST00000551567 SPCS2Q15005 226 aa17.04■□□□□ 0.32
TROAP-216ENST00000551567 FAM90A2PQ658T7 463 aa17.04■□□□□ 0.32
TROAP-216ENST00000551567 ZFAND3Q9H8U3 227 aa17.04■□□□□ 0.32
TROAP-216ENST00000551567 ENY2Q9NPA8 101 aa17.04■□□□□ 0.32
TROAP-216ENST00000551567 IGHV3-66A0A0C4DH42 116 aa17.03■□□□□ 0.32
TROAP-216ENST00000551567 SUB1P53999 127 aaKnown RBP eCLIP17.03■□□□□ 0.32
TROAP-216ENST00000551567 ZNF600Q6ZNG1 722 aa17.03■□□□□ 0.32
TROAP-216ENST00000551567 CORTO00230 105 aa17.02■□□□□ 0.32
TROAP-216ENST00000551567 TMEM50AO95807 157 aa17.02■□□□□ 0.32
TROAP-216ENST00000551567 OR5AC1P0C628 307 aa17.02■□□□□ 0.32
TROAP-216ENST00000551567 ALDH3B2P48448 385 aa17.02■□□□□ 0.32
TROAP-216ENST00000551567 PVRIGQ6DKI7 326 aa17.02■□□□□ 0.32
TROAP-216ENST00000551567 LILRB2Q8N423 598 aa17.02■□□□□ 0.32
TROAP-216ENST00000551567 TMEM222Q9H0R3 208 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms