RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 A8MWP6 167 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 TRDCB7Z8K6 153 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 H0Y8G0 127 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 H3BSH0 61 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 H3BUA1 57 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 PHOX2AO14813 284 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 SULT1B1O43704 296 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 GATBO75879 557 aaKnown RBP1.64□□□□□ -2.15
CPSF6-207ENST00000551516 ATP5LO75964 103 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 RPP14O95059 124 aaKnown RBP1.64□□□□□ -2.15
CPSF6-207ENST00000551516 CDRT1O95170 752 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 CST1P01037 141 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 IGHV3-11P01762 117 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 CD74P04233 296 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 CRYGCP07315 174 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 RBMY1A1P0DJD3 496 aaKnown RBP1.64□□□□□ -2.15
CPSF6-207ENST00000551516 RBMY1CP0DJD4 496 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 IGHV3-43DP0DP04 118 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 PPP1CCP36873 323 aaKnown RBP1.64□□□□□ -2.15
CPSF6-207ENST00000551516 LEPP41159 167 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 GNG10P50151 68 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 GTF2A1P52655 376 aaPredicted RBP1.64□□□□□ -2.15
CPSF6-207ENST00000551516 ATP1B3P54709 279 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 SYNJ2BPP57105 145 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 SLC35B1P78383 322 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 DEFA5Q01523 94 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 UNC119Q13432 240 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 ARL6IP1Q15041 203 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 RBMY1FQ15415 496 aaKnown RBP1.64□□□□□ -2.15
CPSF6-207ENST00000551516 ATP6AP1Q15904 470 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 MPV17LQ2QL34 196 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 RPL39P5Q59GN2 51 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 C1orf100Q5SVJ3 147 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 FAM27D1Q5T7N8 215 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 BCL2L15Q5TBC7 163 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 TMEM244Q5VVB8 128 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 UNQ9165/PRO28630Q6UXU0 137 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 C19orf35Q6ZS72 473 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 LHFPL3Q86UP9 236 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 GPHB5Q86YW7 130 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 TMEM61Q8N0U2 210 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 SYS1Q8N2H4 156 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 TCTEX1D1Q8N7M0 179 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 LFNGQ8NES3 379 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 OR8J1Q8NGP2 316 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 OR13C9Q8NGT0 318 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 OR2K2Q8NGT1 345 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 KCNG3Q8TAE7 436 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 FAM81AQ8TBF8 368 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 TEX47Q8TBZ9 253 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 ARL11Q969Q4 196 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 SLC25A38Q96DW6 304 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 BORCS8Q96FH0 119 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 VSIG2Q96IQ7 327 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 SEC22AQ96IW7 307 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 SLC29A1Q99808 456 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 CIB1Q99828 191 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 SULT4A1Q9BR01 284 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 FAM103A1Q9BTL3 118 aaKnown RBP1.64□□□□□ -2.15
CPSF6-207ENST00000551516 GON7Q9BXV9 100 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 REEP1Q9H902 201 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 FGF20Q9NP95 211 aaPredicted RBP1.64□□□□□ -2.15
CPSF6-207ENST00000551516 FKBP14Q9NWM8 211 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 RABL2BQ9UNT1 228 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 POMPQ9Y244 141 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 RRP15Q9Y3B9 282 aaKnown RBP1.64□□□□□ -2.15
CPSF6-207ENST00000551516 FAT3Q8TDW7 4589 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 IGKV1D-8A0A087WSZ0 117 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 HELTA6NFD8 242 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 SNTNA6NMZ2 147 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 NCBP2LA6PVI3 153 aaKnown RBP1.63□□□□□ -2.15
CPSF6-207ENST00000551516 ZNF705EA8MWA4 302 aaPredicted RBP1.63□□□□□ -2.15
CPSF6-207ENST00000551516 ZNF670-ZNF695F2Z2N8 137 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 H3BN98 237 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 CA11O75493 328 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 OR2A4O95047 310 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 UBCP0CG48 685 aaKnown RBP1.63□□□□□ -2.15
CPSF6-207ENST00000551516 CBLN1P23435 193 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 NFYBP25208 207 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 HTR2CP28335 458 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 GLP1RP43220 463 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 ETV1P50549 477 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 ATP5IP56385 69 aaPredicted RBP1.63□□□□□ -2.15
CPSF6-207ENST00000551516 KRTAP10-4P60372 401 aaPredicted RBP1.63□□□□□ -2.15
CPSF6-207ENST00000551516 INSL4Q14641 139 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 MMDQ15546 238 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 ZSCAN26Q16670 478 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 SYT6Q5T7P8 510 aaPredicted RBP1.63□□□□□ -2.15
CPSF6-207ENST00000551516 FAM131AQ6UXB0 335 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 ACOT7LQ6ZUV0 252 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 LYG2Q86SG7 212 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 LINC00596Q86U02 117 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 PPP1R27Q86WC6 154 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 DHFR2Q86XF0 187 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 CDH26Q8IXH8 852 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 PUSL1Q8N0Z8 303 aaKnown RBP1.63□□□□□ -2.15
CPSF6-207ENST00000551516 Q8N402 240 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 TTC9CQ8N5M4 171 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 TMEM252Q8N6L7 170 aa1.63□□□□□ -2.15
CPSF6-207ENST00000551516 Q8NAQ8 132 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms