RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 PSMB2P49721 201 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 GNG3P63215 75 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 IL5RAQ01344 420 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 SYCNQ0VAF6 134 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 SKP2Q13309 424 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 C6orf99Q4VX62 202 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 FAM78BQ5VT40 261 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 TMEM236Q5W0B7 351 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 SLC16A13Q7RTY0 426 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 RPRMLQ8N4K4 120 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 ATPAF2Q8N5M1 289 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 ZNF439Q8NDP4 499 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 SLC26A10Q8NG04 563 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 OR2Z1Q8NG97 314 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 OR6N1Q8NGY5 312 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 MCFD2Q8NI22 146 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 YIPF5Q969M3 257 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 TMEM203Q969S6 136 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 FAM104AQ969W3 186 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 CPNE2Q96FN4 548 aaPredicted RBP3.41□□□□□ -1.86
CPSF6-206ENST00000550987 MCEEQ96PE7 176 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 OR4K3Q96R72 315 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 SIGMAR1Q99720 223 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 SNRNP25Q9BV90 132 aaKnown RBP3.41□□□□□ -1.86
CPSF6-206ENST00000550987 SLC19A3Q9BZV2 496 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 TAS2R13Q9NYV9 303 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 DOK5Q9P104 306 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 VPREB3Q9UKI3 123 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 SIGLEC7Q9Y286 467 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 NEBP20929 6669 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 IGKV1-27A0A075B6S5 117 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 A0A096LNT2 108 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 IGHV1-45A0A0A0MS14 117 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 A0A1B0GX78 115 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 C5orf63A6NC05 138 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 PRORSD1PA6NEY8 169 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 CEACAM18A8MTB9 384 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 BPY2O14599 106 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 PDE6DO43924 150 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 IFNA10P01566 189 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 UQCRHP07919 91 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 RBP1P09455 135 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 SMIM6P0DI80 62 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 SULT1A3P0DMM9 295 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 SULT1A4P0DMN0 295 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 CXCR1P25024 350 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 MIPP30301 263 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 LOXL1Q08397 574 aaPredicted RBP3.4□□□□□ -1.87
CPSF6-206ENST00000550987 SYT6Q5T7P8 510 aaPredicted RBP3.4□□□□□ -1.87
CPSF6-206ENST00000550987 DCUN1D2Q6PH85 259 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 TOMM20LQ6UXN7 152 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 GRINAQ7Z429 371 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 ZNF645Q8N7E2 425 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 Q8N9L7 120 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 FAM57AQ8TBR7 257 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 SRSF12Q8WXF0 261 aaKnown RBP3.4□□□□□ -1.87
CPSF6-206ENST00000550987 ASB17Q8WXJ9 295 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 ASB13Q8WXK3 278 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 NARS2Q96I59 477 aaKnown RBP3.4□□□□□ -1.87
CPSF6-206ENST00000550987 TRIB3Q96RU7 358 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 C12orf57Q99622 126 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 C20orf144Q9BQM9 153 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 SAMD10Q9BYL1 202 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 MS4A6AQ9H2W1 248 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 VAX2Q9UIW0 290 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 DKKL1Q9UK85 242 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 SLC35A3Q9Y2D2 325 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.4□□□□□ -1.87
CPSF6-206ENST00000550987 UFC1Q9Y3C8 167 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 ORC6Q9Y5N6 252 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 ALG5Q9Y673 324 aa3.4□□□□□ -1.87
CPSF6-206ENST00000550987 SNRNP200O75643 2136 aaKnown RBP3.4□□□□□ -1.87
CPSF6-206ENST00000550987 ALPK2Q86TB3 2170 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 PQLC2LA1A4F0 135 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 OR5H1A6NKK0 313 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 K7EP13 123 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 OR7C1O76099 320 aaPredicted RBP3.39□□□□□ -1.87
CPSF6-206ENST00000550987 CYB5R3P00387 301 aaPredicted RBP3.39□□□□□ -1.87
CPSF6-206ENST00000550987 HLA-DQB2P05538 268 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 ADRA2AP08913 450 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 FBP1P09467 338 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 ATF1P18846 271 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 TAC1P20366 129 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 GRPRP30550 384 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 CCR7P32248 378 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 SRP14P37108 136 aaKnown RBP3.39□□□□□ -1.87
CPSF6-206ENST00000550987 RAB13P51153 203 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 FMODQ06828 376 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 LRRC75BQ2VPJ9 315 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 TTC32Q5I0X7 151 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 DEFB121Q5J5C9 76 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 ZFP2Q6ZN57 461 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 NTM-AS1Q6ZSK4 140 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 RASSF6Q6ZTQ3 369 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 FAM231DQ6ZW35 169 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 LRRC28Q86X40 367 aaPredicted RBP3.39□□□□□ -1.87
CPSF6-206ENST00000550987 SAXO1Q8IYX7 474 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 ZNF676Q8N7Q3 588 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 OR4M1Q8NGD0 313 aa3.39□□□□□ -1.87
CPSF6-206ENST00000550987 OR4C13Q8NGP0 309 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms