RNA–Protein interactions for RNA: ENST00000549842.1

CPNE8-206, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-206ENST00000549842 VPS29Q9UBQ0 182 aa2.36□□□□□ -2.03
CPNE8-206ENST00000549842 ZNF337Q9Y3M9 751 aa2.36□□□□□ -2.03
CPNE8-206ENST00000549842 DSCAML1Q8TD84 2053 aa2.36□□□□□ -2.03
CPNE8-206ENST00000549842 ZBED9Q6R2W3 1325 aa2.36□□□□□ -2.03
CPNE8-206ENST00000549842 TMED7-TICAM2A0A0A6YYA0 188 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 A0A1B0GV50 99 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 CLDN24A6NM45 220 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 VGLL3A8MV65 326 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 PSCAO43653 123 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 SYNGR2O43760 224 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 CPSF4O95639 269 aaKnown RBP2.35□□□□□ -2.03
CPNE8-206ENST00000549842 HLA-DQB2P05538 268 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 PRB4P10163 310 aaPredicted RBP2.35□□□□□ -2.03
CPNE8-206ENST00000549842 RANP62826 216 aaKnown RBP2.35□□□□□ -2.03
CPNE8-206ENST00000549842 IGFBP7Q16270 282 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 C1orf194Q5T5A4 169 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 HIST2H3PS2Q5TEC6 136 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 IGFL3Q6UXB1 125 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 SDIM1Q6ZPB5 146 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 LRRC34Q8IZ02 419 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 DEFB125Q8N687 156 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 CLDN22Q8N7P3 220 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 SLC35B4Q969S0 331 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 UPK3BQ9BT76 320 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 PECRQ9BY49 303 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 NKX6-2Q9C056 277 aaPredicted RBP2.35□□□□□ -2.03
CPNE8-206ENST00000549842 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.35□□□□□ -2.03
CPNE8-206ENST00000549842 R4GN34 69 aa2.35□□□□□ -2.03
CPNE8-206ENST00000549842 CEP162Q5TB80 1403 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 ARFGEF2Q9Y6D5 1785 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 ANK2Q01484 3957 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 TGIF2-C20orf24A0A0A6YYL0 155 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 A0A1W2PQ67 120 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 VPS37CA5D8V6 355 aaPredicted RBP2.34□□□□□ -2.03
CPNE8-206ENST00000549842 LOC730098B7Z3J9 87 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 IGLV3-19P01714 112 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 CRYGDP07320 174 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 ESDP10768 282 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 CD79AP11912 226 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 NPPCP23582 126 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 MAP2K4P45985 399 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 CDK9P50750 372 aaKnown RBP2.34□□□□□ -2.03
CPNE8-206ENST00000549842 ERVS71-1P61550 626 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 MRPS25P82663 173 aaKnown RBP2.34□□□□□ -2.03
CPNE8-206ENST00000549842 IFITM2Q01629 132 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 SLC9A3R2Q15599 337 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 ZNF141Q15928 474 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 KRTAP25-1Q3LHN0 102 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 SPIN3Q5JUX0 258 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 SCXQ7RTU7 201 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 LRRC25Q8N386 305 aaPredicted RBP2.34□□□□□ -2.03
CPNE8-206ENST00000549842 TMEM86BQ8N661 226 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 OR51D1Q8NGF3 324 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 OR1L8Q8NGR8 309 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 OR2T27Q8NH04 317 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 PRAP1Q96NZ9 151 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 CCL13Q99616 98 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 MND1Q9BWT6 205 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 CRCT1Q9UGL9 99 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 VPREB3Q9UKI3 123 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 ANAPC10Q9UM13 185 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 SNX12Q9UMY4 172 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 DUOX1Q9NRD9 1551 aa2.34□□□□□ -2.03
CPNE8-206ENST00000549842 PTPRJQ12913 1337 aa2.34□□□□□ -2.04
CPNE8-206ENST00000549842 CHD5Q8TDI0 1954 aa2.34□□□□□ -2.04
CPNE8-206ENST00000549842 OTOFQ9HC10 1997 aa2.34□□□□□ -2.04
CPNE8-206ENST00000549842 DMBT1Q9UGM3 2413 aaPredicted RBP2.33□□□□□ -2.04
CPNE8-206ENST00000549842 PRKDCP78527 4128 aaKnown RBP2.33□□□□□ -2.04
CPNE8-206ENST00000549842 SDK2Q58EX2 2172 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 PKDREJQ9NTG1 2253 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 IGHV1-69-2A0A0G2JMI3 117 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 DHRS12A0PJE2 317 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 IGSF23A1L1A6 192 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 OR6C6A6NF89 314 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 OR4C45A6NMZ5 311 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 SLC17A3O00476 420 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 CHP2O43745 196 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 FAM228BP0C875 321 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 SLC25A16P16260 332 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 CCL1P22362 96 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 HSD11B1P28845 292 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 OR4D2P58180 307 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 TMED2Q15363 201 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 SPA17Q15506 151 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 CST6Q15828 149 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 FAM201AQ5SY85 155 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 OR5B17Q8NGF7 314 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 OR4K13Q8NH42 304 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 OR10A6Q8NH74 314 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 CDC26Q8NHZ8 85 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 LHFPL5Q8TAF8 219 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 MUC7Q8TAX7 377 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 CMTM2Q8TAZ6 248 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 FNDC9Q8TBE3 224 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 ANKRD7Q92527 254 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 C12orf43Q96C57 262 aaKnown RBP2.33□□□□□ -2.04
CPNE8-206ENST00000549842 OR52E6Q96RD3 313 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 C11orf1Q9H5F2 150 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 FAM96AQ9H5X1 160 aa2.33□□□□□ -2.04
CPNE8-206ENST00000549842 PXMP4Q9Y6I8 212 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms