RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 SIGLEC8Q9NYZ4 499 aa11.94□□□□□ -0.5
DDX54-205ENST00000548786 F8W735 103 aaPredicted RBP11.93□□□□□ -0.5
DDX54-205ENST00000548786 ZNF207O43670 478 aaKnown RBP11.93□□□□□ -0.5
DDX54-205ENST00000548786 TMEM187Q14656 261 aa11.93□□□□□ -0.5
DDX54-205ENST00000548786 DEFB114Q30KQ6 69 aa11.93□□□□□ -0.5
DDX54-205ENST00000548786 BTNL8Q6UX41 500 aa11.93□□□□□ -0.5
DDX54-205ENST00000548786 Q8N1Y9 231 aa11.93□□□□□ -0.5
DDX54-205ENST00000548786 UXS1Q8NBZ7 420 aa11.93□□□□□ -0.5
DDX54-205ENST00000548786 WDR89Q96FK6 387 aaPredicted RBP11.93□□□□□ -0.5
DDX54-205ENST00000548786 BSCL2Q96G97 398 aaPredicted RBP11.93□□□□□ -0.5
DDX54-205ENST00000548786 C20orf24Q9BUV8 137 aa11.93□□□□□ -0.5
DDX54-205ENST00000548786 MLXQ9UH92 298 aa11.93□□□□□ -0.5
DDX54-205ENST00000548786 KCNIP3Q9Y2W7 256 aa11.93□□□□□ -0.5
DDX54-205ENST00000548786 A8MWP6 167 aa11.92□□□□□ -0.5
DDX54-205ENST00000548786 I3L2K1 104 aa11.92□□□□□ -0.5
DDX54-205ENST00000548786 IGHV4-30-4P0DP06 118 aa11.92□□□□□ -0.5
DDX54-205ENST00000548786 ADMP35318 185 aa11.92□□□□□ -0.5
DDX54-205ENST00000548786 INPP1P49441 399 aa11.92□□□□□ -0.5
DDX54-205ENST00000548786 SUPT4H1P63272 117 aaKnown RBP11.92□□□□□ -0.5
DDX54-205ENST00000548786 TRIQKQ629K1 86 aa11.92□□□□□ -0.5
DDX54-205ENST00000548786 GTSCR1Q86UQ5 136 aa11.92□□□□□ -0.5
DDX54-205ENST00000548786 SBSPONQ8IVN8 264 aa11.92□□□□□ -0.5
DDX54-205ENST00000548786 ZNF114Q8NC26 417 aa11.92□□□□□ -0.5
DDX54-205ENST00000548786 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.92□□□□□ -0.5
DDX54-205ENST00000548786 TMEM56-RWDD3S4R434 201 aa11.92□□□□□ -0.5
DDX54-205ENST00000548786 SCAF4O95104 1147 aaKnown RBP11.91□□□□□ -0.5
DDX54-205ENST00000548786 RNASE2P10153 161 aaKnown RBP11.91□□□□□ -0.5
DDX54-205ENST00000548786 VAMP1P23763 118 aa11.91□□□□□ -0.5
DDX54-205ENST00000548786 CCR6P51684 374 aa11.91□□□□□ -0.5
DDX54-205ENST00000548786 CD81P60033 236 aa11.91□□□□□ -0.5
DDX54-205ENST00000548786 BAK1Q16611 211 aa11.91□□□□□ -0.5
DDX54-205ENST00000548786 LYZL2Q7Z4W2 148 aa11.91□□□□□ -0.5
DDX54-205ENST00000548786 FAM219AQ8IW50 185 aa11.91□□□□□ -0.5
DDX54-205ENST00000548786 ZNF436Q9C0F3 470 aaPredicted RBP11.91□□□□□ -0.5
DDX54-205ENST00000548786 PALMDQ9NP74 551 aa11.91□□□□□ -0.5
DDX54-205ENST00000548786 UFC1Q9Y3C8 167 aa11.91□□□□□ -0.5
DDX54-205ENST00000548786 HUWE1Q7Z6Z7 4374 aaKnown RBP11.91□□□□□ -0.5
DDX54-205ENST00000548786 ZNF785A8K8V0 405 aa11.9□□□□□ -0.5
DDX54-205ENST00000548786 CEBPZOSA8MTT3 80 aa11.9□□□□□ -0.5
DDX54-205ENST00000548786 YIF1AO95070 293 aa11.9□□□□□ -0.5
DDX54-205ENST00000548786 CTSGP08311 255 aa11.9□□□□□ -0.5
DDX54-205ENST00000548786 CD7P09564 240 aa11.9□□□□□ -0.5
DDX54-205ENST00000548786 MFAP4P55083 255 aa11.9□□□□□ -0.5
DDX54-205ENST00000548786 SPSB3Q6PJ21 355 aa11.9□□□□□ -0.5
DDX54-205ENST00000548786 TMEM61Q8N0U2 210 aa11.9□□□□□ -0.5
DDX54-205ENST00000548786 OR2K2Q8NGT1 345 aa11.9□□□□□ -0.5
DDX54-205ENST00000548786 TMEM190Q8WZ59 177 aa11.9□□□□□ -0.5
DDX54-205ENST00000548786 GALNT14Q96FL9 552 aa11.9□□□□□ -0.5
DDX54-205ENST00000548786 WFDC10AQ9H1F0 79 aa11.9□□□□□ -0.5
DDX54-205ENST00000548786 HEYLQ9NQ87 328 aaPredicted RBP11.9□□□□□ -0.5
DDX54-205ENST00000548786 TECRQ9NZ01 308 aaKnown RBP11.9□□□□□ -0.5
DDX54-205ENST00000548786 NUPL2O15504 423 aaKnown RBP11.89□□□□□ -0.51
DDX54-205ENST00000548786 GNG7O60262 68 aa11.89□□□□□ -0.51
DDX54-205ENST00000548786 NHLRC4P0CG21 123 aaPredicted RBP11.89□□□□□ -0.51
DDX54-205ENST00000548786 SULT1A3P0DMM9 295 aa11.89□□□□□ -0.51
DDX54-205ENST00000548786 SULT1A4P0DMN0 295 aa11.89□□□□□ -0.51
DDX54-205ENST00000548786 ANXA3P12429 323 aa11.89□□□□□ -0.51
DDX54-205ENST00000548786 SPCS3P61009 180 aa11.89□□□□□ -0.51
DDX54-205ENST00000548786 SDHCQ99643 169 aaPredicted RBP11.89□□□□□ -0.51
DDX54-205ENST00000548786 NEURL2Q9BR09 285 aa11.89□□□□□ -0.51
DDX54-205ENST00000548786 U3KQK5 164 aa11.89□□□□□ -0.51
DDX54-205ENST00000548786 IGHV3-49A0A0A0MS15 119 aa11.88□□□□□ -0.51
DDX54-205ENST00000548786 NDUFA4O00483 81 aa11.88□□□□□ -0.51
DDX54-205ENST00000548786 OPRK1P41145 380 aa11.88□□□□□ -0.51
DDX54-205ENST00000548786 SUB1P53999 127 aaKnown RBP eCLIP11.88□□□□□ -0.51
DDX54-205ENST00000548786 MLANAQ16655 118 aa11.88□□□□□ -0.51
DDX54-205ENST00000548786 ANKRD55Q3KP44 614 aa11.88□□□□□ -0.51
DDX54-205ENST00000548786 LGI3Q8N145 548 aa11.88□□□□□ -0.51
DDX54-205ENST00000548786 IL22RA2Q969J5 263 aa11.88□□□□□ -0.51
DDX54-205ENST00000548786 TUBA4BQ9H853 241 aa11.88□□□□□ -0.51
DDX54-205ENST00000548786 DAZ1Q9NQZ3 744 aaKnown RBP11.88□□□□□ -0.51
DDX54-205ENST00000548786 NDUFA13Q9P0J0 144 aa11.88□□□□□ -0.51
DDX54-205ENST00000548786 STAB2Q8WWQ8 2551 aa11.87□□□□□ -0.51
DDX54-205ENST00000548786 INS-IGF2F8WCM5 200 aa11.87□□□□□ -0.51
DDX54-205ENST00000548786 PPP1R1AQ13522 171 aa11.87□□□□□ -0.51
DDX54-205ENST00000548786 DEFB125Q8N687 156 aa11.87□□□□□ -0.51
DDX54-205ENST00000548786 DUSP18Q8NEJ0 188 aa11.87□□□□□ -0.51
DDX54-205ENST00000548786 OR52E5Q8NH55 327 aa11.87□□□□□ -0.51
DDX54-205ENST00000548786 ZNF414Q96IQ9 312 aa11.87□□□□□ -0.51
DDX54-205ENST00000548786 SLC25A21Q9BQT8 299 aaPredicted RBP11.87□□□□□ -0.51
DDX54-205ENST00000548786 FNDC4Q9H6D8 234 aaPredicted RBP11.87□□□□□ -0.51
DDX54-205ENST00000548786 MRPL36Q9P0J6 103 aaKnown RBP11.87□□□□□ -0.51
DDX54-205ENST00000548786 MRPL27Q9P0M9 148 aaKnown RBP11.87□□□□□ -0.51
DDX54-205ENST00000548786 TENM3Q9P273 2699 aa11.87□□□□□ -0.51
DDX54-205ENST00000548786 IGHV3OR16-13A0A075B7E8 117 aa11.86□□□□□ -0.51
DDX54-205ENST00000548786 IGHV3-74A0A0B4J1X5 117 aa11.86□□□□□ -0.51
DDX54-205ENST00000548786 A0A0B4J2A0 478 aa11.86□□□□□ -0.51
DDX54-205ENST00000548786 SRPXP78539 464 aa11.86□□□□□ -0.51
DDX54-205ENST00000548786 RELQ04864 619 aaPredicted RBP11.86□□□□□ -0.51
DDX54-205ENST00000548786 SMCO1Q147U7 214 aa11.86□□□□□ -0.51
DDX54-205ENST00000548786 AARDQ4LEZ3 155 aa11.86□□□□□ -0.51
DDX54-205ENST00000548786 TMEM128Q5BJH2 165 aa11.86□□□□□ -0.51
DDX54-205ENST00000548786 NMSQ5H8A3 153 aa11.86□□□□□ -0.51
DDX54-205ENST00000548786 RBPMS2Q6ZRY4 209 aaKnown RBP11.86□□□□□ -0.51
DDX54-205ENST00000548786 CENPSQ8N2Z9 138 aa11.86□□□□□ -0.51
DDX54-205ENST00000548786 OR1S1Q8NH92 325 aa11.86□□□□□ -0.51
DDX54-205ENST00000548786 MARC2Q969Z3 335 aa11.86□□□□□ -0.51
DDX54-205ENST00000548786 ATP6V0BQ99437 205 aa11.86□□□□□ -0.51
DDX54-205ENST00000548786 TXN2Q99757 166 aa11.86□□□□□ -0.51
DDX54-205ENST00000548786 C19orf73Q9NVV2 129 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms