RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 FABP5P3A8MUU1 101 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 COCHO43405 550 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 OR5F1O95221 314 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 RPL12P30050 165 aaKnown RBP0.48□□□□□ -2.33
CCDC38-206ENST00000548771 BLVRAP53004 296 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 MED12LQ86YW9 2145 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 OR4C6Q8NH72 309 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 EFCAB1Q9HAE3 211 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 PREX1Q8TCU6 1659 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 NCOA6Q14686 2063 aaPredicted RBP0.48□□□□□ -2.33
CCDC38-206ENST00000548771 KIAA0556O60303 1618 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 CAMSAP1Q5T5Y3 1602 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 CICQ96RK0 1608 aaPredicted RBP0.48□□□□□ -2.33
CCDC38-206ENST00000548771 FREM2Q5SZK8 3169 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 MAP3K1Q13233 1512 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 EFCAB6Q5THR3 1501 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 ARHGEF12Q9NZN5 1544 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 FLNBO75369 2602 aaKnown RBP0.48□□□□□ -2.33
CCDC38-206ENST00000548771 KALRNO60229 2985 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 EPG5Q9HCE0 2579 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 NBEAQ8NFP9 2946 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 WDR87Q6ZQQ6 2873 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 KIAA1109Q2LD37 5005 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 AKAP9Q99996 3911 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 LAMB4A4D0S4 1761 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 ADCY9O60503 1353 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 TRIOO75962 3097 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 FRYLO94915 3013 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 MYOM1P52179 1685 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 CFAP43Q8NDM7 1665 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 ANKRD11Q6UB99 2663 aaPredicted RBP0.47□□□□□ -2.33
CCDC38-206ENST00000548771 MYO18BQ8IUG5 2567 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 APOEP02649 317 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 PRM2P04554 102 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 FAM228BP0C875 321 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 CD151P48509 253 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 MAP3K7CLP57077 242 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 C1orf195Q5TG92 126 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 LCN15Q6UWW0 184 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 IMP3Q9NV31 184 aaKnown RBP0.47□□□□□ -2.33
CCDC38-206ENST00000548771 DIP2AQ14689 1571 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 NRKQ7Z2Y5 1582 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 MROH2BQ7Z745 1585 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 ALPK2Q86TB3 2170 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 PTPN13Q12923 2485 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 TTC28Q96AY4 2481 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 KMT2CQ8NEZ4 4911 aaKnown RBP0.47□□□□□ -2.33
CCDC38-206ENST00000548771 DCAF1Q9Y4B6 1507 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 GCN1Q92616 2671 aaKnown RBP0.47□□□□□ -2.33
CCDC38-206ENST00000548771 POLA1P09884 1462 aaPredicted RBP0.47□□□□□ -2.33
CCDC38-206ENST00000548771 CFTRP13569 1480 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 PLB1Q6P1J6 1458 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 HEATR5AQ86XA9 2040 aa0.47□□□□□ -2.33
CCDC38-206ENST00000548771 USP9XQ93008 2570 aaPredicted RBP0.47□□□□□ -2.33
CCDC38-206ENST00000548771 PRG4Q92954 1404 aaPredicted RBP0.47□□□□□ -2.33
CCDC38-206ENST00000548771 FASNP49327 2511 aaKnown RBP0.46□□□□□ -2.34
CCDC38-206ENST00000548771 ROBO1Q9Y6N7 1651 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 MUC2Q02817 5179 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 BIRC6Q9NR09 4857 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 BIVM-ERCC5R4GMW8 1640 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 CSMD2Q7Z408 3487 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 NWD1Q149M9 1564 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 TRBV20OR9-2A0A075B6H5 130 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 BRS3P32247 399 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 ZNF80P51504 273 aaPredicted RBP0.46□□□□□ -2.34
CCDC38-206ENST00000548771 STX5Q13190 355 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 GRK1Q15835 563 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 COQ5Q5HYK3 327 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 CLVS2Q5SYC1 327 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 IBA57Q5T440 356 aaKnown RBP0.46□□□□□ -2.34
CCDC38-206ENST00000548771 SYPL2Q5VXT5 272 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 ZNF550Q7Z398 422 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 FAM9CQ8IZT9 166 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 CNBD2Q96M20 576 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 FGFR1OP2Q9NVK5 253 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 C3orf18Q9UK00 162 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 MAGI3Q5TCQ9 1506 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 CASZ1Q86V15 1759 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 PIEZO1Q92508 2521 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 ZNF462Q96JM2 2506 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 NAV2Q8IVL1 2488 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 MAGI1Q96QZ7 1491 aaPredicted RBP0.46□□□□□ -2.34
CCDC38-206ENST00000548771 RAPGEF2Q9Y4G8 1499 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 WIZO95785 1651 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 C3P01024 1663 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 BLMP54132 1417 aaPredicted RBP0.46□□□□□ -2.34
CCDC38-206ENST00000548771 FAM135BQ49AJ0 1406 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 UHRF1BP1Q6BDS2 1440 aa0.46□□□□□ -2.34
CCDC38-206ENST00000548771 RNF17Q9BXT8 1623 aaKnown RBP0.46□□□□□ -2.34
CCDC38-206ENST00000548771 TENM4Q6N022 2769 aa0.45□□□□□ -2.34
CCDC38-206ENST00000548771 CUBNO60494 3623 aa0.45□□□□□ -2.34
CCDC38-206ENST00000548771 MAST1Q9Y2H9 1570 aa0.45□□□□□ -2.34
CCDC38-206ENST00000548771 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
CCDC38-206ENST00000548771 CPS1P31327 1500 aa0.45□□□□□ -2.34
CCDC38-206ENST00000548771 KIAA0586Q9BVV6 1533 aa0.45□□□□□ -2.34
CCDC38-206ENST00000548771 RP1P56715 2156 aa0.45□□□□□ -2.34
CCDC38-206ENST00000548771 CELSR1Q9NYQ6 3014 aa0.45□□□□□ -2.34
CCDC38-206ENST00000548771 TNS1Q9HBL0 1735 aaKnown RBP0.45□□□□□ -2.34
CCDC38-206ENST00000548771 UBR5O95071 2799 aaPredicted RBP0.45□□□□□ -2.34
CCDC38-206ENST00000548771 EVPLLA8MZ36 301 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms