RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 USP9XQ93008 2570 aaPredicted RBP16.75■□□□□ 0.27
RITA1-201ENST00000548278 FLNCQ14315 2725 aa16.75■□□□□ 0.27
RITA1-201ENST00000548278 IGHV2-70DA0A0C4DH43 119 aa16.74■□□□□ 0.27
RITA1-201ENST00000548278 A0A1W2PRD5 423 aa16.74■□□□□ 0.27
RITA1-201ENST00000548278 A0A1W2PRF3 423 aa16.74■□□□□ 0.27
RITA1-201ENST00000548278 A0A1W2PRM7 423 aa16.74■□□□□ 0.27
RITA1-201ENST00000548278 COLCA2A8K830 154 aa16.74■□□□□ 0.27
RITA1-201ENST00000548278 PAGE4O60829 102 aa16.74■□□□□ 0.27
RITA1-201ENST00000548278 NDUFS6O75380 124 aaKnown RBP16.74■□□□□ 0.27
RITA1-201ENST00000548278 PAX6P26367 422 aa16.74■□□□□ 0.27
RITA1-201ENST00000548278 SSBP2P81877 361 aaPredicted RBP16.74■□□□□ 0.27
RITA1-201ENST00000548278 MRPL41Q8IXM3 137 aaKnown RBP16.74■□□□□ 0.27
RITA1-201ENST00000548278 ZNF114Q8NC26 417 aa16.74■□□□□ 0.27
RITA1-201ENST00000548278 TUBA4BQ9H853 241 aa16.74■□□□□ 0.27
RITA1-201ENST00000548278 SEPSECSQ9HD40 501 aaKnown RBP16.74■□□□□ 0.27
RITA1-201ENST00000548278 FCN1O00602 326 aa16.73■□□□□ 0.27
RITA1-201ENST00000548278 ARL14EPLP0DKL9 152 aa16.73■□□□□ 0.27
RITA1-201ENST00000548278 AREGP15514 252 aa16.73■□□□□ 0.27
RITA1-201ENST00000548278 RHOBP62745 196 aa16.73■□□□□ 0.27
RITA1-201ENST00000548278 GNB1P62873 340 aa16.73■□□□□ 0.27
RITA1-201ENST00000548278 SPATA31B1PQ5VZV4 182 aa16.73■□□□□ 0.27
RITA1-201ENST00000548278 COL12A1Q99715 3063 aa16.73■□□□□ 0.27
RITA1-201ENST00000548278 TEX22C9J3V5 150 aa16.73■□□□□ 0.27
RITA1-201ENST00000548278 TMEM250H0YL14 139 aa16.73■□□□□ 0.27
RITA1-201ENST00000548278 MFAP2P55001 183 aa16.73■□□□□ 0.27
RITA1-201ENST00000548278 CTAG1AP78358 180 aa16.73■□□□□ 0.27
RITA1-201ENST00000548278 C15orf54Q8N8G6 183 aa16.73■□□□□ 0.27
RITA1-201ENST00000548278 ACY3Q96HD9 319 aa16.73■□□□□ 0.27
RITA1-201ENST00000548278 ZFYVE26Q68DK2 2539 aa16.72■□□□□ 0.27
RITA1-201ENST00000548278 TSPAN9O75954 239 aa16.72■□□□□ 0.27
RITA1-201ENST00000548278 CXorf1O96002 111 aa16.72■□□□□ 0.27
RITA1-201ENST00000548278 SPNS3Q6ZMD2 512 aa16.72■□□□□ 0.27
RITA1-201ENST00000548278 OR4F5Q8NH21 305 aa16.72■□□□□ 0.27
RITA1-201ENST00000548278 OR4F4Q96R69 305 aa16.72■□□□□ 0.27
RITA1-201ENST00000548278 GATA2P23769 480 aaPredicted RBP16.71■□□□□ 0.27
RITA1-201ENST00000548278 PDLIM4P50479 330 aa16.71■□□□□ 0.27
RITA1-201ENST00000548278 MMDQ15546 238 aa16.71■□□□□ 0.27
RITA1-201ENST00000548278 SSX2Q16385 188 aa16.71■□□□□ 0.27
RITA1-201ENST00000548278 DYNAPQ8N1N2 210 aa16.71■□□□□ 0.27
RITA1-201ENST00000548278 SPOCK3Q9BQ16 436 aa16.71■□□□□ 0.27
RITA1-201ENST00000548278 MOSP00540 346 aa16.71■□□□□ 0.27
RITA1-201ENST00000548278 MINOS1Q5TGZ0 78 aa16.71■□□□□ 0.27
RITA1-201ENST00000548278 NPBQ8NG41 125 aa16.71■□□□□ 0.27
RITA1-201ENST00000548278 CCL19Q99731 98 aa16.71■□□□□ 0.27
RITA1-201ENST00000548278 KLF2Q9Y5W3 355 aaPredicted RBP16.71■□□□□ 0.27
RITA1-201ENST00000548278 MINOS1-NBL1R4GNA1 71 aa16.71■□□□□ 0.27
RITA1-201ENST00000548278 OOSP1A8MZH6 123 aa16.7■□□□□ 0.26
RITA1-201ENST00000548278 NBR2O15453 112 aa16.7■□□□□ 0.26
RITA1-201ENST00000548278 APELAP0DMC3 54 aa16.7■□□□□ 0.26
RITA1-201ENST00000548278 CD24P25063 80 aa16.7■□□□□ 0.26
RITA1-201ENST00000548278 PLGLAQ15195 96 aa16.7■□□□□ 0.26
RITA1-201ENST00000548278 FBLN7Q53RD9 439 aa16.7■□□□□ 0.26
RITA1-201ENST00000548278 SRSF12Q8WXF0 261 aaKnown RBP16.7■□□□□ 0.26
RITA1-201ENST00000548278 ISOC2Q96AB3 205 aa16.7■□□□□ 0.26
RITA1-201ENST00000548278 EAF1Q96JC9 268 aaPredicted RBP16.7■□□□□ 0.26
RITA1-201ENST00000548278 MRPL36Q9P0J6 103 aaKnown RBP16.7■□□□□ 0.26
RITA1-201ENST00000548278 A0A087WWC5 75 aa16.69■□□□□ 0.26
RITA1-201ENST00000548278 ZNF727A8MUV8 499 aa16.69■□□□□ 0.26
RITA1-201ENST00000548278 C11orf94C9JXX5 98 aa16.69■□□□□ 0.26
RITA1-201ENST00000548278 NDUFA3O95167 84 aa16.69■□□□□ 0.26
RITA1-201ENST00000548278 IGHV3-48P01763 117 aa16.69■□□□□ 0.26
RITA1-201ENST00000548278 CRYGCP07315 174 aa16.69■□□□□ 0.26
RITA1-201ENST00000548278 CCDC144NLQ6NUI1 221 aa16.69■□□□□ 0.26
RITA1-201ENST00000548278 C19orf35Q6ZS72 473 aa16.69■□□□□ 0.26
RITA1-201ENST00000548278 CYP2G1PQ6ZSU1 146 aa16.69■□□□□ 0.26
RITA1-201ENST00000548278 OR1P1Q8NH06 330 aa16.69■□□□□ 0.26
RITA1-201ENST00000548278 NPIPB3Q92617 1050 aa16.69■□□□□ 0.26
RITA1-201ENST00000548278 TBX15Q96SF7 602 aa16.69■□□□□ 0.26
RITA1-201ENST00000548278 SDF2L1Q9HCN8 221 aa16.69■□□□□ 0.26
RITA1-201ENST00000548278 TOX4O94842 621 aa16.69■□□□□ 0.26
RITA1-201ENST00000548278 PNRC1Q12796 327 aaPredicted RBP16.69■□□□□ 0.26
RITA1-201ENST00000548278 FAM78BQ5VT40 261 aa16.69■□□□□ 0.26
RITA1-201ENST00000548278 THAP8Q8NA92 274 aa16.69■□□□□ 0.26
RITA1-201ENST00000548278 ASH1LQ9NR48 2969 aaKnown RBP16.69■□□□□ 0.26
RITA1-201ENST00000548278 IGKV1D-37A0A075B6S9 117 aa16.68■□□□□ 0.26
RITA1-201ENST00000548278 FOXH1O75593 365 aa16.68■□□□□ 0.26
RITA1-201ENST00000548278 GCHFRP30047 84 aa16.68■□□□□ 0.26
RITA1-201ENST00000548278 UBE2G2P60604 165 aa16.68■□□□□ 0.26
RITA1-201ENST00000548278 MIR17HGQ75NE6 70 aa16.68■□□□□ 0.26
RITA1-201ENST00000548278 NANPQ8TBE9 248 aa16.68■□□□□ 0.26
RITA1-201ENST00000548278 SMIM7Q9BQ49 75 aa16.68■□□□□ 0.26
RITA1-201ENST00000548278 FUT9Q9Y231 359 aa16.68■□□□□ 0.26
RITA1-201ENST00000548278 LGALS4P56470 323 aa16.68■□□□□ 0.26
RITA1-201ENST00000548278 ETFRF1Q6IPR1 90 aa16.68■□□□□ 0.26
RITA1-201ENST00000548278 OR2T10Q8NGZ9 312 aa16.68■□□□□ 0.26
RITA1-201ENST00000548278 HIST1H2BAQ96A08 127 aa16.68■□□□□ 0.26
RITA1-201ENST00000548278 RPUSD4Q96CM3 377 aaKnown RBP16.68■□□□□ 0.26
RITA1-201ENST00000548278 MISP3Q96FF7 219 aa16.68■□□□□ 0.26
RITA1-201ENST00000548278 C19orf24Q9BVV8 132 aa16.68■□□□□ 0.26
RITA1-201ENST00000548278 F11RQ9Y624 299 aaKnown RBP16.68■□□□□ 0.26
RITA1-201ENST00000548278 B4DEV8 164 aa16.67■□□□□ 0.26
RITA1-201ENST00000548278 OR5G3P0C626 314 aa16.67■□□□□ 0.26
RITA1-201ENST00000548278 ATP5G3P48201 142 aa16.67■□□□□ 0.26
RITA1-201ENST00000548278 RUSC1-AS1Q66K80 236 aa16.67■□□□□ 0.26
RITA1-201ENST00000548278 ZNF843Q8N446 348 aa16.67■□□□□ 0.26
RITA1-201ENST00000548278 SRSF8Q9BRL6 282 aaKnown RBP16.67■□□□□ 0.26
RITA1-201ENST00000548278 PARLQ9H300 379 aa16.67■□□□□ 0.26
RITA1-201ENST00000548278 DMRT1Q9Y5R6 373 aa16.67■□□□□ 0.26
RITA1-201ENST00000548278 MYO18BQ8IUG5 2567 aa16.67■□□□□ 0.26
RITA1-201ENST00000548278 PSMB11A5LHX3 300 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms