RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 NOXA1Q86UR1 476 aa17.93■□□□□ 0.46
SMARCD1-203ENST00000547247 SIX6O95475 246 aa17.92■□□□□ 0.46
SMARCD1-203ENST00000547247 LY86O95711 162 aa17.92■□□□□ 0.46
SMARCD1-203ENST00000547247 DEFB136Q30KP8 78 aa17.92■□□□□ 0.46
SMARCD1-203ENST00000547247 PVRIGQ6DKI7 326 aa17.92■□□□□ 0.46
SMARCD1-203ENST00000547247 CORTO00230 105 aa17.91■□□□□ 0.46
SMARCD1-203ENST00000547247 TSPAN15O95858 294 aa17.91■□□□□ 0.46
SMARCD1-203ENST00000547247 MBPP02686 304 aaPredicted RBP17.91■□□□□ 0.46
SMARCD1-203ENST00000547247 NPY1RP25929 384 aa17.91■□□□□ 0.46
SMARCD1-203ENST00000547247 OR11H1Q8NG94 326 aa17.91■□□□□ 0.46
SMARCD1-203ENST00000547247 VN1R17PQ8TDU5 208 aa17.91■□□□□ 0.46
SMARCD1-203ENST00000547247 EEF1AKMT3Q96AZ1 226 aa17.91■□□□□ 0.46
SMARCD1-203ENST00000547247 MGAT4CQ9UBM8 478 aa17.91■□□□□ 0.46
SMARCD1-203ENST00000547247 MFSD2BA6NFX1 497 aa17.91■□□□□ 0.46
SMARCD1-203ENST00000547247 CCL24O00175 119 aa17.91■□□□□ 0.46
SMARCD1-203ENST00000547247 ATP5IP56385 69 aaPredicted RBP17.91■□□□□ 0.46
SMARCD1-203ENST00000547247 FAM209BQ5JX69 171 aa17.91■□□□□ 0.46
SMARCD1-203ENST00000547247 PINX1Q96BK5 328 aaKnown RBP17.91■□□□□ 0.46
SMARCD1-203ENST00000547247 RAX2Q96IS3 184 aa17.91■□□□□ 0.46
SMARCD1-203ENST00000547247 MED28Q9H204 178 aa17.91■□□□□ 0.46
SMARCD1-203ENST00000547247 S4R3C0 116 aa17.91■□□□□ 0.46
SMARCD1-203ENST00000547247 TRBV7-1A0A0A6YYK4 115 aa17.9■□□□□ 0.46
SMARCD1-203ENST00000547247 K7EIM0 57 aa17.9■□□□□ 0.46
SMARCD1-203ENST00000547247 SSSCA1O60232 199 aa17.9■□□□□ 0.46
SMARCD1-203ENST00000547247 PF4P02776 101 aa17.9■□□□□ 0.46
SMARCD1-203ENST00000547247 MYCNOSP40205 109 aa17.9■□□□□ 0.46
SMARCD1-203ENST00000547247 CYCSP99999 105 aaKnown RBP17.9■□□□□ 0.46
SMARCD1-203ENST00000547247 IL15RAQ13261 267 aa17.9■□□□□ 0.46
SMARCD1-203ENST00000547247 OR1N2Q8NGR9 330 aa17.9■□□□□ 0.46
SMARCD1-203ENST00000547247 DUX3Q96PT4 197 aa17.9■□□□□ 0.46
SMARCD1-203ENST00000547247 RANGRFQ9HD47 186 aaPredicted RBP17.9■□□□□ 0.46
SMARCD1-203ENST00000547247 PEF1Q9UBV8 284 aaKnown RBP17.9■□□□□ 0.46
SMARCD1-203ENST00000547247 IGHV3-21A0A0B4J1V1 117 aa17.89■□□□□ 0.45
SMARCD1-203ENST00000547247 ANKRD34BA5PLL1 514 aa17.89■□□□□ 0.45
SMARCD1-203ENST00000547247 I3L2K1 104 aa17.89■□□□□ 0.45
SMARCD1-203ENST00000547247 MT-CO2P00403 227 aa17.89■□□□□ 0.45
SMARCD1-203ENST00000547247 HSPB1P04792 205 aaKnown RBP17.89■□□□□ 0.45
SMARCD1-203ENST00000547247 RPP30P78346 268 aaKnown RBP17.89■□□□□ 0.45
SMARCD1-203ENST00000547247 SCARB1Q8WTV0 552 aa17.89■□□□□ 0.45
SMARCD1-203ENST00000547247 TMEM170AQ8WVE7 144 aa17.89■□□□□ 0.45
SMARCD1-203ENST00000547247 DPF1Q92782 380 aa17.89■□□□□ 0.45
SMARCD1-203ENST00000547247 RAB40CQ96S21 281 aa17.89■□□□□ 0.45
SMARCD1-203ENST00000547247 NMES1Q9C002 83 aa17.89■□□□□ 0.45
SMARCD1-203ENST00000547247 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.88■□□□□ 0.45
SMARCD1-203ENST00000547247 IGHV3-23P01764 117 aa17.88■□□□□ 0.45
SMARCD1-203ENST00000547247 H2BFSP57053 126 aa17.88■□□□□ 0.45
SMARCD1-203ENST00000547247 ZNF616Q08AN1 781 aa17.88■□□□□ 0.45
SMARCD1-203ENST00000547247 ETV3LQ6ZN32 361 aa17.88■□□□□ 0.45
SMARCD1-203ENST00000547247 ZNF502Q8TBZ5 544 aa17.88■□□□□ 0.45
SMARCD1-203ENST00000547247 RNASEH2CQ8TDP1 164 aaKnown RBP17.88■□□□□ 0.45
SMARCD1-203ENST00000547247 CCDC140Q96MF4 163 aa17.88■□□□□ 0.45
SMARCD1-203ENST00000547247 RCL1Q9Y2P8 373 aaKnown RBP17.88■□□□□ 0.45
SMARCD1-203ENST00000547247 LSM5Q9Y4Y9 91 aaKnown RBP17.88■□□□□ 0.45
SMARCD1-203ENST00000547247 K7EPK0 472 aa17.87■□□□□ 0.45
SMARCD1-203ENST00000547247 SMIM8Q96KF7 97 aa17.87■□□□□ 0.45
SMARCD1-203ENST00000547247 C21orf62Q9NYP8 219 aa17.87■□□□□ 0.45
SMARCD1-203ENST00000547247 IGHV4OR15-8A0A075B7B6 117 aa17.87■□□□□ 0.45
SMARCD1-203ENST00000547247 A0A087WW49 117 aa17.87■□□□□ 0.45
SMARCD1-203ENST00000547247 LINC01619G3V211 115 aa17.87■□□□□ 0.45
SMARCD1-203ENST00000547247 TRBV12-3P01733 135 aa17.87■□□□□ 0.45
SMARCD1-203ENST00000547247 IFNA4P05014 189 aa17.87■□□□□ 0.45
SMARCD1-203ENST00000547247 OPRK1P41145 380 aa17.87■□□□□ 0.45
SMARCD1-203ENST00000547247 RAB11AP62491 216 aa17.87■□□□□ 0.45
SMARCD1-203ENST00000547247 RAB32Q13637 225 aa17.87■□□□□ 0.45
SMARCD1-203ENST00000547247 FHL3Q13643 280 aa17.87■□□□□ 0.45
SMARCD1-203ENST00000547247 SPANXN5Q5MJ07 72 aa17.87■□□□□ 0.45
SMARCD1-203ENST00000547247 CLEC19AQ6UXS0 136 aa17.87■□□□□ 0.45
SMARCD1-203ENST00000547247 PSENENQ9NZ42 101 aa17.87■□□□□ 0.45
SMARCD1-203ENST00000547247 TRRAPQ9Y4A5 3859 aa17.86■□□□□ 0.45
SMARCD1-203ENST00000547247 C15orf62A8K5M9 175 aa17.86■□□□□ 0.45
SMARCD1-203ENST00000547247 PAX9P55771 341 aa17.86■□□□□ 0.45
SMARCD1-203ENST00000547247 TAS2R30P59541 319 aa17.86■□□□□ 0.45
SMARCD1-203ENST00000547247 S100A10P60903 97 aa17.86■□□□□ 0.45
SMARCD1-203ENST00000547247 FCN2Q15485 313 aa17.86■□□□□ 0.45
SMARCD1-203ENST00000547247 PAIP2BQ9ULR5 123 aaKnown RBP17.86■□□□□ 0.45
SMARCD1-203ENST00000547247 STRAPQ9Y3F4 350 aaKnown RBP17.86■□□□□ 0.45
SMARCD1-203ENST00000547247 WNK1Q9H4A3 2382 aa17.86■□□□□ 0.45
SMARCD1-203ENST00000547247 H3BP45 60 aa17.85■□□□□ 0.45
SMARCD1-203ENST00000547247 TMEM50AO95807 157 aa17.85■□□□□ 0.45
SMARCD1-203ENST00000547247 CLEC3BP05452 202 aa17.85■□□□□ 0.45
SMARCD1-203ENST00000547247 OR8U8P0C7N1 319 aa17.85■□□□□ 0.45
SMARCD1-203ENST00000547247 CXCL3P19876 107 aa17.85■□□□□ 0.45
SMARCD1-203ENST00000547247 RRAS2P62070 204 aaPredicted RBP17.85■□□□□ 0.45
SMARCD1-203ENST00000547247 ATP6V0BQ99437 205 aa17.85■□□□□ 0.45
SMARCD1-203ENST00000547247 FNDC4Q9H6D8 234 aaPredicted RBP17.85■□□□□ 0.45
SMARCD1-203ENST00000547247 RPS10-NUDT3A0A1W2PQS6 291 aa17.84■□□□□ 0.45
SMARCD1-203ENST00000547247 L7N2F9 121 aa17.84■□□□□ 0.45
SMARCD1-203ENST00000547247 IGHV3-48P01763 117 aa17.84■□□□□ 0.45
SMARCD1-203ENST00000547247 PVALBP20472 110 aaPredicted RBP17.84■□□□□ 0.45
SMARCD1-203ENST00000547247 MFAP4P55083 255 aa17.84■□□□□ 0.45
SMARCD1-203ENST00000547247 VAMP2P63027 116 aa17.84■□□□□ 0.45
SMARCD1-203ENST00000547247 PRR31Q5SQ13 230 aa17.84■□□□□ 0.45
SMARCD1-203ENST00000547247 UBAC2Q8NBM4 344 aa17.84■□□□□ 0.45
SMARCD1-203ENST00000547247 OR11H7Q8NGC8 314 aa17.84■□□□□ 0.45
SMARCD1-203ENST00000547247 OR4C12Q96R67 309 aa17.84■□□□□ 0.45
SMARCD1-203ENST00000547247 ZP3P21754 424 aa17.83■□□□□ 0.45
SMARCD1-203ENST00000547247 GPR183P32249 361 aa17.83■□□□□ 0.45
SMARCD1-203ENST00000547247 MLANAQ16655 118 aa17.83■□□□□ 0.45
SMARCD1-203ENST00000547247 ACSM6Q6P461 480 aa17.83■□□□□ 0.45
SMARCD1-203ENST00000547247 TXN2Q99757 166 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms